Ggt1 (gamma-glutamyltransferase 1) - Rat Genome Database

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Gene: Ggt1 (gamma-glutamyltransferase 1) Mus musculus
Analyze
Symbol: Ggt1
Name: gamma-glutamyltransferase 1
RGD ID: 731835
MGI Page MGI
Description: Predicted to enable glutathione hydrolase activity; leukotriene-C(4) hydrolase; and peptidyltransferase activity. Involved in several processes, including cysteine biosynthetic process; glutathione biosynthetic process; and regulation of inflammatory response. Acts upstream of or within spermatogenesis. Located in vesicle. Is expressed in genitourinary system; liver; and yolk sac. Human ortholog(s) of this gene implicated in gamma-glutamyl transpeptidase deficiency. Orthologous to several human genes including GGT1 (gamma-glutamyltransferase 1).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: AI746379; CD224; dwg; gamma-glutamyl transpeptidase; gamma-glutamyltranspeptidase 1; GGT; GGT 1; GGT-1; Ggtp; glutathione hydrolase 1; glutathione hydrolase 1 proenzyme; leukotriene-C4 hydrolase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391075,396,910 - 75,422,027 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1075,397,438 - 75,422,034 (+)EnsemblGRCm39 Ensembl
GRCm381075,561,076 - 75,586,193 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1075,561,604 - 75,586,200 (+)EnsemblGRCm38mm10GRCm38
MGSCv371075,036,338 - 75,048,927 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361075,017,309 - 75,029,898 (+)NCBIMGSCv36mm8
Celera1076,618,288 - 76,630,876 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1038.55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
(R)-lipoic acid  (ISO)
(S)-colchicine  (EXP)
(S)-nicotine  (ISO)
1,2-dibromoethane  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,2,2-tetramine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-acetamidofluorene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP)
4-amino-2,6-dinitrotoluene  (ISO)
4-hydroxynon-2-enal  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
7,12-dimethyltetraphene  (ISO)
acetamide  (ISO)
Acetaminophen cystein  (EXP)
acetylsalicylic acid  (ISO)
acivicin  (EXP)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
Alisol A  (ISO)
Alisol B  (ISO)
Alisol C 23-acetate  (ISO)
all-trans-retinoic acid  (EXP,ISO)
anethole  (ISO)
anilines  (ISO)
antimonite  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
asbestos  (ISO)
atazanavir sulfate  (ISO)
atrazine  (ISO)
Augmentin  (ISO)
barium chloride  (ISO)
benzo[a]pyrene  (EXP,ISO)
bifenthrin  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
boric acids  (ISO)
buta-1,3-diene  (EXP)
Butylbenzyl phthalate  (EXP)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chenodeoxycholic acid  (ISO)
chlordecone  (EXP)
Chlorobenzilate  (ISO)
chloroprene  (EXP)
chromium(6+)  (EXP)
cisplatin  (ISO)
coenzyme Q10  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
crocidolite asbestos  (ISO)
crotonaldehyde  (ISO)
CU-O LINKAGE  (ISO)
curcumin  (ISO)
cyclosporin A  (EXP,ISO)
DDT  (ISO)
deoxycholic acid  (ISO)
Di-n-octyl phthalate  (EXP)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
diclofenac  (ISO)
dicofol  (ISO)
diethyl phthalate  (EXP)
Diisodecyl phthalate  (EXP)
diisononyl phthalate  (EXP)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
Epomediol  (ISO)
estradiol  (ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
fenarimol  (ISO)
fenvalerate  (ISO)
fipronil  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
furan  (ISO)
gamma-hexachlorocyclohexane  (EXP,ISO)
genistein  (EXP)
glutathione  (EXP)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
glycyrrhetinate  (ISO)
glycyrrhetinic acid  (ISO)
graphite  (ISO)
GW 4064  (EXP)
hexadecanoic acid  (ISO)
indole-3-methanol  (ISO)
irinotecan  (ISO)
isoniazide  (ISO)
L-ascorbic acid  (ISO)
lead oxide  (ISO)
lead(0)  (ISO)
letrozole  (ISO)
lipoic acid  (ISO)
lipopolysaccharide  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
melatonin  (ISO)
menadione  (ISO)
mercury atom  (ISO)
mercury dichloride  (ISO)
mercury(0)  (ISO)
methotrexate  (ISO)
methoxychlor  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
microcystin-LR  (EXP)
N(5)-ethyl-L-glutamine  (ISO)
N-acetyl-L-cysteine  (ISO)
N-ethyl-N-nitrosourea  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
naphthalene  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
nicotine  (ISO)
nicotinic acid  (ISO)
nitrobenzenes  (ISO)
nitrogen dioxide  (ISO)
novobiocin  (EXP)
ochratoxin A  (ISO)
oleic acid  (ISO)
omeprazole  (ISO)
orphenadrine  (ISO)
oxaliplatin  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
permethrin  (ISO)
phenobarbital  (ISO)
phentolamine  (EXP)
phenylephrine  (EXP)
PhIP  (ISO)
piperonyl butoxide  (ISO)
potassium dichromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
prochloraz  (ISO)
quercetin  (EXP)
resveratrol  (ISO)
risperidone  (ISO)
S-hexylglutathione  (EXP)
sanguinarine  (EXP)
SB 203580  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (EXP)
sirolimus  (ISO)
sodium acetate trihydrate  (ISO)
sodium arsenite  (EXP,ISO)
spironolactone  (ISO)
streptozocin  (ISO)
succimer  (ISO)
tamibarotene  (ISO)
Tanshinone I  (EXP)
telmisartan  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
thymoquinone  (EXP,ISO)
topotecan  (ISO)
trans-anethole  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
triptonide  (EXP)
tris(2-butoxyethyl) phosphate  (ISO)
valproic acid  (ISO)
vancomycin  (EXP)
vitamin E  (ISO)
zinc atom  (ISO)
zinc oxide  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal coat appearance  (IAGP)
abnormal coat/hair pigmentation  (IAGP)
abnormal glucose homeostasis  (IAGP)
abnormal lens morphology  (IAGP)
abnormal long bone epiphyseal plate proliferative zone  (IAGP)
abnormal long bone hypertrophic chondrocyte zone  (IAGP)
abnormal postnatal growth/weight/body size  (IAGP)
abnormal reproductive system development  (IAGP)
abnormal sexual maturation  (IAGP)
abnormal skeleton development  (IAGP)
absent corpus luteum  (IAGP)
absent estrous cycle  (IAGP)
absent tertiary ovarian follicles  (IAGP)
cataract  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased bone mass  (IAGP)
decreased circulating cysteine level  (IAGP)
decreased circulating estradiol level  (IAGP)
decreased circulating follicle stimulating hormone level  (IAGP)
decreased circulating insulin-like growth factor I level  (IAGP)
decreased circulating testosterone level  (IAGP)
decreased cysteine level  (IAGP)
decreased glutathione level  (IAGP)
decreased locomotor activity  (IAGP)
decreased long bone epiphyseal plate size  (IAGP)
decreased spleen red pulp amount  (IEA)
decreased testis weight  (IAGP)
decreased thyroxine level  (IEA)
diluted coat color  (IAGP)
disproportionate dwarf  (IAGP)
epididymis hypoplasia  (IAGP)
failure of copulatory plug deposition  (IAGP)
failure of superovulation  (IAGP)
female infertility  (IAGP)
glutathionuria  (IAGP)
hindlimb paralysis  (IAGP)
immotile sperm  (IAGP)
impaired ovarian folliculogenesis  (IAGP)
increased circulating glutathione level  (IAGP)
increased circulating growth hormone level  (IAGP)
increased osteoclast cell number  (IEA)
infertility  (IEA)
kyphosis  (IAGP)
male infertility  (IAGP)
nervous  (IAGP)
nuclear cataract  (IAGP)
oligozoospermia  (IAGP)
oocyte degeneration  (IAGP)
ovary hypoplasia  (IAGP)
postnatal growth retardation  (IAGP)
premature death  (IAGP)
priapism  (IAGP)
reduced fertility  (IAGP)
seminal vesicle hypoplasia  (IAGP)
short femur  (IAGP)
short tibia  (IAGP)
small seminiferous tubules  (IAGP)
small testis  (IAGP)
small vertebrae  (IAGP)
uterus hypoplasia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Characteristics of adults with and without cystic fibrosis-related diabetes. Adler AI, etal., Diabet Med. 2007 Oct;24(10):1143-8.
2. Diabetic complications are associated with liver enzyme activities in people with type 1 diabetes. Arkkila PE, etal., Diabetes Res Clin Pract. 2001 May;52(2):113-8.
3. Enhanced gamma-glutamyl transpeptidase expression and selective loss of CuZn superoxide dismutase in hepatic iron overload. Brown KE, etal., Free Radic Biol Med. 1998 Mar 1;24(4):545-55. doi: 10.1016/s0891-5849(97)00284-0.
4. The relation between liver histopathology and GGT levels in viral hepatitis: more important in hepatitis B. Eminler AT, etal., Turk J Gastroenterol. 2014 Aug;25(4):411-5. doi: 10.5152/tjg.2014.3693.
5. Risk factors for incident type 2 diabetes in individuals with a BMI of <27 kg/m(2): the role of gamma-glutamyltransferase. Data from an Epidemiological Study on the Insulin Resistance Syndrome (DESIR). Gautier A, etal., Diabetologia. 2009 Nov 20.
6. The Serum Gamma Glutamyl Transpeptidase - A Non invasive Diagnostic Bio Marker of Chronic Anicteric Non Alcoholic Liver Diseases. H A K, J Clin Diagn Res. 2013 Apr;7(4):691-4. doi: 10.7860/JCDR/2013/5569.2883. Epub 2013 Mar 9.
7. Hyperglycaemia, stress oxidant, liver dysfunction and histological changes in diabetic male rat pancreas and liver: protective effect of 17 beta-estradiol. Hamden K, etal., Steroids. 2008 May;73(5):495-501. Epub 2008 Jan 4.
8. [The value of gamma-glutamyl transpeptidase mRNA typing in monitoring carcinogensis of heptocytes]. Han G, etal., Zhonghua Nei Ke Za Zhi. 2002 Mar;41(3):160-2.
9. Ultrasonographic hepatic steatosis increases prediction of mortality risk from elevated serum gamma-glutamyl transpeptidase levels. Haring R, etal., Hepatology. 2009 Nov;50(5):1403-11. doi: 10.1002/hep.23135.
10. Differential expression of the rat gamma-glutamyl transpeptidase gene promoters along with differentiation of hepatoblasts into biliary or hepatocytic lineage. Holic N, etal., Am J Pathol. 2000 Aug;157(2):537-48. doi: 10.1016/s0002-9440(10)64564-6.
11. Clinical, virologic and pathologic significance of elevated serum gamma-glutamyl transpeptidase in patients with chronic hepatitis C. Hwang SJ, etal., Zhonghua Yi Xue Za Zhi (Taipei). 2000 Jul;63(7):527-35.
12. Correlation between gamma-glutamyl transpeptidase activity and outcomes after Kasai portoenterostomy for biliary atresia. Ihn K, etal., J Pediatr Surg. 2018 Mar;53(3):461-467. doi: 10.1016/j.jpedsurg.2017.10.001. Epub 2017 Oct 6.
13. Significance of serum gamma glutamyl transpeptidase as a marker of alcoholism. Ishii H, etal., Pharmacol Biochem Behav. 1980;13 Suppl 1:95-9. doi: 10.1016/s0091-3057(80)80015-3.
14. Gamma-glutamyl transpeptidase in leprosy. Jain VK, etal., Indian J Lepr. 1991 Jan-Mar;63(1):93-6.
15. Gamma-glutamyl transpeptidase level associated with metabolic syndrome and proinflammatory parameters in the young Roma population in eastern Slovakia: a population-based study. Jarcuska P, etal., Cent Eur J Public Health. 2014 Mar;22 Suppl:S43-50. doi: 10.21101/cejph.a3901.
16. Induced hepatotoxicity in female rats by aflatoxin B1 and ethynylestradiol interaction. Kamdem L, etal., Toxicol Appl Pharmacol. 1983 Jan;67(1):26-40. doi: 10.1016/0041-008x(83)90241-7.
17. [Serum gamma-glutamyl transpeptidase activity in children with chronic hepatitis B]. Lebensztejn DM, etal., Pol Merkur Lekarski. 2005 Mar;18(105):271-4.
18. Serum gamma-glutamyltransferase was differently associated with microalbuminuria by status of hypertension or diabetes: the Coronary Artery Risk Development in Young Adults (CARDIA) Study. Lee DH, etal., Clin Chem. 2005 Jul;51(7):1185-91. Epub 2005 May 12.
19. Serum gamma-glutamyltransferase predicts non-fatal myocardial infarction and fatal coronary heart disease among 28,838 middle-aged men and women. Lee DH, etal., Eur Heart J. 2006 Sep;27(18):2170-6. Epub 2006 Jun 13.
20. Gamma glutamyl transferase and metabolic syndrome, cardiovascular disease, and mortality risk: the Framingham Heart Study. Lee DS, etal., Arterioscler Thromb Vasc Biol. 2007 Jan;27(1):127-33. Epub 2006 Nov 9.
21. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
22. MGDs mouse GO annotations MGD data from the GO Consortium
23. MGD IEA MGD IEA
24. Elevated gamma-glutamyl transpeptidase levels in malignant melanoma. Murray JL, etal., Cancer. 1982 Apr 1;49(7):1439-43. doi: 10.1002/1097-0142(19820401)49:7<1439::aid-cncr2820490721>3.0.co;2-1.
25. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
26. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
27. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
28. Mouse MP Annotation Import Pipeline RGD automated import pipeline
29. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
30. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
31. Gamma-glutamyltransferase level in pregnancy is an independent risk factor for gestational diabetes mellitus. Tan PC, etal., J Obstet Gynaecol Res. 2008 Aug;34(4):512-7.
32. Prognostic value of alkaline phosphatase, gamma-glutamyl transpeptidase and lactate dehydrogenase in hepatocellular carcinoma patients treated with liver resection. Wu SJ, etal., Int J Surg. 2016 Dec;36(Pt A):143-151. doi: 10.1016/j.ijsu.2016.10.033. Epub 2016 Oct 25.
33. [Relationship between methylation status of gamma-glutamyl transpeptidase (GGT) genes and abnormal expression of its enzyme proteins in tissues of human hepatomas]. Yao D, etal., Zhonghua Gan Zang Bing Za Zhi. 1999 Sep;7(3):132-4.
Additional References at PubMed
PMID:1968405   PMID:2891746   PMID:7485380   PMID:7523374   PMID:7641802   PMID:7775425   PMID:8101000   PMID:8104871   PMID:8566783   PMID:8663190   PMID:8755578   PMID:9139708  
PMID:9546365   PMID:9627710   PMID:10349636   PMID:10392451   PMID:10474818   PMID:10751614   PMID:10940879   PMID:11003618   PMID:11042159   PMID:11076861   PMID:11089562   PMID:11095909  
PMID:11217851   PMID:11463821   PMID:11795900   PMID:12163373   PMID:12225953   PMID:12453183   PMID:12468440   PMID:12477932   PMID:12810527   PMID:14610273   PMID:14614146   PMID:14634009  
PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16332269   PMID:17097888   PMID:17363454   PMID:18063838   PMID:18357469   PMID:18478268   PMID:19760322   PMID:19850887  
PMID:20096683   PMID:20622017   PMID:20843830   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22242126   PMID:22424930   PMID:23615310   PMID:23863468   PMID:24698228   PMID:25132819  
PMID:25326709   PMID:26977590   PMID:27775020   PMID:27820600   PMID:28660214   PMID:30591459   PMID:32284594   PMID:36685533  


Genomics

Comparative Map Data
Ggt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391075,396,910 - 75,422,027 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1075,397,438 - 75,422,034 (+)EnsemblGRCm39 Ensembl
GRCm381075,561,076 - 75,586,193 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1075,561,604 - 75,586,200 (+)EnsemblGRCm38mm10GRCm38
MGSCv371075,036,338 - 75,048,927 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361075,017,309 - 75,029,898 (+)NCBIMGSCv36mm8
Celera1076,618,288 - 76,630,876 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1038.55NCBI
GGT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382224,583,750 - 24,628,996 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2224,594,811 - 24,629,005 (+)EnsemblGRCh38hg38GRCh38
GRCh372224,979,718 - 25,024,963 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362223,309,718 - 23,354,972 (+)NCBINCBI36Build 36hg18NCBI36
Build 342223,304,271 - 23,349,489NCBI
Celera228,779,459 - 8,824,717 (+)NCBICelera
Cytogenetic Map22q11.23NCBI
HuRef227,929,404 - 7,974,708 (+)NCBIHuRef
CHM1_12224,938,527 - 24,983,991 (+)NCBICHM1_1
T2T-CHM13v2.02225,045,351 - 25,090,447 (+)NCBIT2T-CHM13v2.0
Ggt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82013,074,141 - 13,103,551 (-)NCBIGRCr8
mRatBN7.22013,074,695 - 13,104,095 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2013,074,700 - 13,108,442 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2013,781,279 - 13,802,241 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02013,142,223 - 13,163,185 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02013,614,726 - 13,635,690 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02014,019,723 - 14,045,781 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2014,019,723 - 14,025,068 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02016,209,337 - 16,231,303 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2014,560,916 - 14,581,414 (-)NCBICelera
Cytogenetic Map20p12NCBI
Ggt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554558,082,578 - 8,099,523 (+)NCBIChiLan1.0ChiLan1.0
GGT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22334,377,966 - 34,418,498 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12237,108,395 - 37,149,276 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0225,424,334 - 5,469,705 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
GGT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12628,301,455 - 28,315,029 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2627,360,247 - 27,389,912 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02629,689,666 - 29,719,314 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2629,692,972 - 29,719,310 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12627,773,590 - 27,803,271 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02627,390,370 - 27,420,073 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02628,380,459 - 28,410,164 (+)NCBIUU_Cfam_GSD_1.0
Ggt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118141,962,444 - 141,979,185 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936619762,278 - 791,610 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC103223058
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1197,353,922 - 7,406,392 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236661001,521 - 6,868 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ggt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474710,030,034 - 10,048,554 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ggt1
774 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3161
Count of miRNA genes:702
Interacting mature miRNAs:908
Transcripts:ENSMUST00000006508, ENSMUST00000124259, ENSMUST00000125770, ENSMUST00000128886, ENSMUST00000129020, ENSMUST00000129232, ENSMUST00000131565, ENSMUST00000134503, ENSMUST00000139459, ENSMUST00000140219, ENSMUST00000141062, ENSMUST00000143226, ENSMUST00000143792, ENSMUST00000145079, ENSMUST00000145928, ENSMUST00000148447, ENSMUST00000151212, ENSMUST00000152657, ENSMUST00000155186, ENSMUST00000156487
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302035Lmb4_mlupus in MRL and B6 F2 cross (mouse)Not determined106684818792258673Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105109149085091639Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101270405184079784Mouse
26884447Sklq9_mskull length QTL 9, 10 week (mouse)1067335830111735905Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1073987216125515907Mouse
4142137Femwf3_mfemur work to failure 3 (mouse)Not determined75338568109338767Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1270405184079784Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105851696992517096Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101270405184079784Mouse
14746991Manh68_mmandible shape 68 (mouse)105228049786280497Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined104984818783848412Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1063935779115935905Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1067835830124835905Mouse
1357632Vtbt9_mvertebral trabecular bone trait 9 (mouse)Not determined1075338568109338767Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101270405184079784Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104933801283338157Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4672040382491121Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105149340082491121Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101010826587401095Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined104984822283848397Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1073987216125515907Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
11039497Ltpr5a_mLeishmania tropica response 5a (mouse)1073506901107507047Mouse
4142107Obrq12_mobesity resistance QTL 12 (mouse)Not determined7398721682491121Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined104984818783848412Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined104984818783848412Mouse
1300533Aem3_manti-erythrocyte autoantibody modifier 3 (mouse)Not determined106549093899491121Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102287589991035862Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105109149085091639Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
1301737Insq9_minsulin QTL 9 (mouse)Not determined106549093899491121Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1270405184079784Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101270405184079784Mouse
1300975Fembrs3_mfemur breaking strength 3 (mouse)Not determined1075338568109338767Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined104984822283848397Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1270405184079784Mouse
1302060El3_mepilepsy 3 (mouse)Not determined106549093899491121Mouse

Markers in Region
AI746379  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381075,585,986 - 75,586,105UniSTSGRCm38
MGSCv371075,048,731 - 75,048,850UniSTSGRCm37
Celera1076,630,680 - 76,630,799UniSTS
Cytogenetic Map10C1UniSTS
Whitehead/MRC_RH10857.73UniSTS
U30509  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381075,586,076 - 75,586,153UniSTSGRCm38
MGSCv371075,048,821 - 75,048,898UniSTSGRCm37
Celera1076,630,770 - 76,630,847UniSTS
Cytogenetic Map10C1UniSTS
cM Map1040.6UniSTS
Whitehead_YAC10 UniSTS
Ggt1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381075,584,856 - 75,585,650UniSTSGRCm38
MGSCv371075,047,601 - 75,048,395UniSTSGRCm37
Celera1076,629,550 - 76,630,344UniSTS
Cytogenetic Map10C1UniSTS
cM Map10 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001305992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003948591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003948592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC009287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC087540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU756502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  E15738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L17331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L17332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L17333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L17334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L17335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L17336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S78533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U30509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000006508   ⟹   ENSMUSP00000006508
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,409,282 - 75,422,016 (+)Ensembl
GRCm38.p6 Ensembl1075,573,448 - 75,586,182 (+)Ensembl
Ensembl Acc Id: ENSMUST00000124259   ⟹   ENSMUSP00000122616
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,407,365 - 75,415,194 (+)Ensembl
GRCm38.p6 Ensembl1075,571,531 - 75,579,360 (+)Ensembl
Ensembl Acc Id: ENSMUST00000125770   ⟹   ENSMUSP00000117968
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,404,491 - 75,411,888 (+)Ensembl
GRCm38.p6 Ensembl1075,568,657 - 75,576,054 (+)Ensembl
Ensembl Acc Id: ENSMUST00000128886   ⟹   ENSMUSP00000118261
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,404,496 - 75,412,136 (+)Ensembl
GRCm38.p6 Ensembl1075,568,662 - 75,576,302 (+)Ensembl
Ensembl Acc Id: ENSMUST00000129020   ⟹   ENSMUSP00000118825
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,411,910 - 75,420,737 (+)Ensembl
GRCm38.p6 Ensembl1075,576,076 - 75,584,903 (+)Ensembl
Ensembl Acc Id: ENSMUST00000129232   ⟹   ENSMUSP00000115118
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,402,127 - 75,414,751 (+)Ensembl
GRCm38.p6 Ensembl1075,566,293 - 75,578,917 (+)Ensembl
Ensembl Acc Id: ENSMUST00000131565   ⟹   ENSMUSP00000119844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,404,475 - 75,412,136 (+)Ensembl
GRCm38.p6 Ensembl1075,568,641 - 75,576,302 (+)Ensembl
Ensembl Acc Id: ENSMUST00000134503   ⟹   ENSMUSP00000121312
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,404,490 - 75,422,034 (+)Ensembl
GRCm38.p6 Ensembl1075,568,656 - 75,586,200 (+)Ensembl
Ensembl Acc Id: ENSMUST00000139459   ⟹   ENSMUSP00000121774
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,409,720 - 75,415,217 (+)Ensembl
GRCm38.p6 Ensembl1075,573,886 - 75,579,383 (+)Ensembl
Ensembl Acc Id: ENSMUST00000140219   ⟹   ENSMUSP00000118870
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,397,489 - 75,412,136 (+)Ensembl
GRCm38.p6 Ensembl1075,561,655 - 75,576,302 (+)Ensembl
Ensembl Acc Id: ENSMUST00000141062   ⟹   ENSMUSP00000120686
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,399,982 - 75,410,160 (+)Ensembl
GRCm38.p6 Ensembl1075,564,148 - 75,574,326 (+)Ensembl
Ensembl Acc Id: ENSMUST00000143226   ⟹   ENSMUSP00000115115
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,407,360 - 75,414,754 (+)Ensembl
GRCm38.p6 Ensembl1075,571,526 - 75,578,920 (+)Ensembl
Ensembl Acc Id: ENSMUST00000143792   ⟹   ENSMUSP00000117851
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,402,132 - 75,415,199 (+)Ensembl
GRCm38.p6 Ensembl1075,566,298 - 75,579,365 (+)Ensembl
Ensembl Acc Id: ENSMUST00000145079   ⟹   ENSMUSP00000115483
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,397,438 - 75,412,089 (+)Ensembl
GRCm38.p6 Ensembl1075,561,604 - 75,576,255 (+)Ensembl
Ensembl Acc Id: ENSMUST00000145928   ⟹   ENSMUSP00000118852
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,404,468 - 75,415,116 (+)Ensembl
GRCm38.p6 Ensembl1075,568,634 - 75,579,282 (+)Ensembl
Ensembl Acc Id: ENSMUST00000148447
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,407,404 - 75,417,267 (+)Ensembl
GRCm38.p6 Ensembl1075,571,570 - 75,581,433 (+)Ensembl
Ensembl Acc Id: ENSMUST00000151212   ⟹   ENSMUSP00000119387
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,404,508 - 75,411,803 (+)Ensembl
GRCm38.p6 Ensembl1075,568,674 - 75,575,969 (+)Ensembl
Ensembl Acc Id: ENSMUST00000152657   ⟹   ENSMUSP00000115818
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,399,989 - 75,412,089 (+)Ensembl
GRCm38.p6 Ensembl1075,564,155 - 75,576,255 (+)Ensembl
Ensembl Acc Id: ENSMUST00000155186   ⟹   ENSMUSP00000123017
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,417,204 - 75,421,992 (+)Ensembl
GRCm38.p6 Ensembl1075,581,370 - 75,586,158 (+)Ensembl
Ensembl Acc Id: ENSMUST00000156487
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1075,420,939 - 75,422,025 (+)Ensembl
GRCm38.p6 Ensembl1075,585,105 - 75,586,191 (+)Ensembl
RefSeq Acc Id: NM_001305992   ⟹   NP_001292921
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,404,496 - 75,422,025 (+)NCBI
GRCm381075,568,662 - 75,586,191 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001379537   ⟹   NP_001366466
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,399,966 - 75,422,027 (+)NCBI
GRCm381075,564,132 - 75,586,193 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001379538   ⟹   NP_001366467
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,399,966 - 75,422,027 (+)NCBI
GRCm381075,564,132 - 75,586,193 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001379539   ⟹   NP_001366468
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,399,966 - 75,422,027 (+)NCBI
GRCm381075,564,132 - 75,586,193 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001379540   ⟹   NP_001366469
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,407,394 - 75,422,027 (+)NCBI
GRCm381075,571,560 - 75,586,193 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001379541   ⟹   NP_001366470
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,407,394 - 75,422,027 (+)NCBI
GRCm381075,571,560 - 75,586,193 (+)NCBI
Sequence:
RefSeq Acc Id: NM_008116   ⟹   NP_032142
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,409,329 - 75,422,025 (+)NCBI
GRCm381075,573,495 - 75,586,191 (+)NCBI
MGSCv371075,036,338 - 75,048,927 (+)RGD
Celera1076,618,288 - 76,630,876 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XR_003948591
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,399,948 - 75,422,027 (+)NCBI
GRCm381075,564,114 - 75,586,193 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003948592
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391075,396,910 - 75,422,016 (+)NCBI
GRCm381075,561,076 - 75,586,182 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001292921 (Get FASTA)   NCBI Sequence Viewer  
  NP_001366466 (Get FASTA)   NCBI Sequence Viewer  
  NP_001366467 (Get FASTA)   NCBI Sequence Viewer  
  NP_001366468 (Get FASTA)   NCBI Sequence Viewer  
  NP_001366469 (Get FASTA)   NCBI Sequence Viewer  
  NP_001366470 (Get FASTA)   NCBI Sequence Viewer  
  NP_001415419 (Get FASTA)   NCBI Sequence Viewer  
  NP_001415420 (Get FASTA)   NCBI Sequence Viewer  
  NP_001415421 (Get FASTA)   NCBI Sequence Viewer  
  NP_032142 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA97395 (Get FASTA)   NCBI Sequence Viewer  
  AAH12969 (Get FASTA)   NCBI Sequence Viewer  
  CAJ18404 (Get FASTA)   NCBI Sequence Viewer  
  EDL31902 (Get FASTA)   NCBI Sequence Viewer  
  EDL31903 (Get FASTA)   NCBI Sequence Viewer  
  EDL31904 (Get FASTA)   NCBI Sequence Viewer  
  EDL31905 (Get FASTA)   NCBI Sequence Viewer  
  EDL31906 (Get FASTA)   NCBI Sequence Viewer  
  EDL31907 (Get FASTA)   NCBI Sequence Viewer  
  EDL31908 (Get FASTA)   NCBI Sequence Viewer  
  EDL31909 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000006508
  ENSMUSP00000006508.4
  ENSMUSP00000115115.2
  ENSMUSP00000115118.2
  ENSMUSP00000115483.2
  ENSMUSP00000115818.2
  ENSMUSP00000117851.2
  ENSMUSP00000117968.2
  ENSMUSP00000118261.2
  ENSMUSP00000118825.2
  ENSMUSP00000118852.2
  ENSMUSP00000118870.2
  ENSMUSP00000119387.2
  ENSMUSP00000119844.2
  ENSMUSP00000120686.2
  ENSMUSP00000121312
  ENSMUSP00000121312.2
  ENSMUSP00000121774.2
  ENSMUSP00000122616.2
  ENSMUSP00000123017.2
GenBank Protein Q60928 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_032142   ⟸   NM_008116
- Peptide Label: precursor
- UniProtKB: Q60928 (UniProtKB/Swiss-Prot),   Q4FK56 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001292921   ⟸   NM_001305992
- Peptide Label: precursor
- UniProtKB: Q60928 (UniProtKB/Swiss-Prot),   Q4FK56 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001366466   ⟸   NM_001379537
- Peptide Label: precursor
- UniProtKB: Q60928 (UniProtKB/Swiss-Prot),   Q4FK56 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001366467   ⟸   NM_001379538
- Peptide Label: precursor
- UniProtKB: Q60928 (UniProtKB/Swiss-Prot),   Q4FK56 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001366468   ⟸   NM_001379539
- Peptide Label: precursor
- UniProtKB: Q60928 (UniProtKB/Swiss-Prot),   Q4FK56 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001366470   ⟸   NM_001379541
- Peptide Label: precursor
- UniProtKB: Q60928 (UniProtKB/Swiss-Prot),   Q4FK56 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001366469   ⟸   NM_001379540
- Peptide Label: precursor
- UniProtKB: Q60928 (UniProtKB/Swiss-Prot),   Q4FK56 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000117968   ⟸   ENSMUST00000125770
Ensembl Acc Id: ENSMUSP00000115483   ⟸   ENSMUST00000145079
Ensembl Acc Id: ENSMUSP00000121774   ⟸   ENSMUST00000139459
Ensembl Acc Id: ENSMUSP00000122616   ⟸   ENSMUST00000124259
Ensembl Acc Id: ENSMUSP00000117851   ⟸   ENSMUST00000143792
Ensembl Acc Id: ENSMUSP00000115115   ⟸   ENSMUST00000143226
Ensembl Acc Id: ENSMUSP00000006508   ⟸   ENSMUST00000006508
Ensembl Acc Id: ENSMUSP00000115818   ⟸   ENSMUST00000152657
Ensembl Acc Id: ENSMUSP00000119844   ⟸   ENSMUST00000131565
Ensembl Acc Id: ENSMUSP00000118852   ⟸   ENSMUST00000145928
Ensembl Acc Id: ENSMUSP00000119387   ⟸   ENSMUST00000151212
Ensembl Acc Id: ENSMUSP00000115118   ⟸   ENSMUST00000129232
Ensembl Acc Id: ENSMUSP00000118825   ⟸   ENSMUST00000129020
Ensembl Acc Id: ENSMUSP00000118870   ⟸   ENSMUST00000140219
Ensembl Acc Id: ENSMUSP00000121312   ⟸   ENSMUST00000134503
Ensembl Acc Id: ENSMUSP00000118261   ⟸   ENSMUST00000128886
Ensembl Acc Id: ENSMUSP00000120686   ⟸   ENSMUST00000141062
Ensembl Acc Id: ENSMUSP00000123017   ⟸   ENSMUST00000155186

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q60928-F1-model_v2 AlphaFold Q60928 1-568 view protein structure

Promoters
RGD ID:6819319
Promoter ID:MM_KWN:4553
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Spleen
Transcripts:OTTMUST00000086365,   OTTMUST00000086378
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361075,028,281 - 75,028,887 (+)MPROMDB
RGD ID:6819313
Promoter ID:MM_KWN:4554
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000086360,   OTTMUST00000086366,   OTTMUST00000086367,   OTTMUST00000086368,   OTTMUST00000086369,   OTTMUST00000086370
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361075,031,236 - 75,031,736 (+)MPROMDB
RGD ID:6819312
Promoter ID:MM_KWN:4555
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000086371,   OTTMUST00000086372,   OTTMUST00000086374
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361075,033,336 - 75,034,337 (+)MPROMDB
RGD ID:6819311
Promoter ID:MM_KWN:4556
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000086361,   OTTMUST00000086373
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361075,035,586 - 75,036,337 (+)MPROMDB
RGD ID:6819315
Promoter ID:MM_KWN:4557
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000086375
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361075,038,386 - 75,038,886 (+)MPROMDB
RGD ID:6819314
Promoter ID:MM_KWN:4558
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000086377
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361075,043,336 - 75,043,987 (+)MPROMDB
RGD ID:6819316
Promoter ID:MM_KWN:4559
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000086376
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361075,047,486 - 75,048,187 (+)MPROMDB
RGD ID:8672314
Promoter ID:EPDNEW_M14187
Type:multiple initiation site
Name:Ggt1_1
Description:Mus musculus gamma-glutamyltransferase 1 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14188  EPDNEW_M14189  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381075,568,664 - 75,568,724EPDNEW
RGD ID:8672316
Promoter ID:EPDNEW_M14188
Type:multiple initiation site
Name:Ggt1_2
Description:Mus musculus gamma-glutamyltransferase 1 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14187  EPDNEW_M14189  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381075,571,563 - 75,571,623EPDNEW
RGD ID:8672318
Promoter ID:EPDNEW_M14189
Type:initiation region
Name:Ggt1_3
Description:Mus musculus gamma-glutamyltransferase 1 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14187  EPDNEW_M14188  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381075,573,523 - 75,573,583EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95706 AgrOrtholog
Ensembl Genes ENSMUSG00000006345 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000006508 ENTREZGENE
  ENSMUST00000006508.10 UniProtKB/Swiss-Prot
  ENSMUST00000124259.8 UniProtKB/TrEMBL
  ENSMUST00000125770.8 UniProtKB/TrEMBL
  ENSMUST00000128886.8 UniProtKB/TrEMBL
  ENSMUST00000129020.3 UniProtKB/TrEMBL
  ENSMUST00000129232.8 UniProtKB/TrEMBL
  ENSMUST00000131565.8 UniProtKB/TrEMBL
  ENSMUST00000134503 ENTREZGENE
  ENSMUST00000134503.8 UniProtKB/Swiss-Prot
  ENSMUST00000139459.8 UniProtKB/TrEMBL
  ENSMUST00000140219.8 UniProtKB/TrEMBL
  ENSMUST00000141062.8 UniProtKB/TrEMBL
  ENSMUST00000143226.8 UniProtKB/TrEMBL
  ENSMUST00000143792.8 UniProtKB/TrEMBL
  ENSMUST00000145079.8 UniProtKB/TrEMBL
  ENSMUST00000145928.8 UniProtKB/TrEMBL
  ENSMUST00000151212.8 UniProtKB/TrEMBL
  ENSMUST00000152657.8 UniProtKB/TrEMBL
  ENSMUST00000155186.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.246.130 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.60.20.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GGT_lsub_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GGT_peptidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GGT_ssub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ntn_hydrolases_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14598 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:95706 ENTREZGENE
NCBI Gene 14598 ENTREZGENE
PANTHER GLUTATHIONE HYDROLASE 1 PROENZYME-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11686 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam G_glu_transpept UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ggt1 PhenoGen
PRINTS GGTRANSPTASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_GLU_TRANSPEPTIDASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56235 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YVX1_MOUSE UniProtKB/TrEMBL
  D3YVY4_MOUSE UniProtKB/TrEMBL
  D3YWW2_MOUSE UniProtKB/TrEMBL
  D3YWW4_MOUSE UniProtKB/TrEMBL
  D3YWZ7_MOUSE UniProtKB/TrEMBL
  D3YXV6_MOUSE UniProtKB/TrEMBL
  D3YY79_MOUSE UniProtKB/TrEMBL
  D3YYH6_MOUSE UniProtKB/TrEMBL
  D3Z266_MOUSE UniProtKB/TrEMBL
  D3Z2C6_MOUSE UniProtKB/TrEMBL
  D3Z4Q6_MOUSE UniProtKB/TrEMBL
  F6V328_MOUSE UniProtKB/TrEMBL
  F6WUX1_MOUSE UniProtKB/TrEMBL
  GGT1_MOUSE UniProtKB/Swiss-Prot
  Q4FK56 ENTREZGENE, UniProtKB/TrEMBL
  Q60928 ENTREZGENE