Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: CALCOCO1 (calcium binding and coiled-coil domain 1) Homo sapiens
Analyze
Symbol: CALCOCO1
Name: calcium binding and coiled-coil domain 1
RGD ID: 731717
Description: Exhibits several functions, including armadillo repeat domain binding activity; beta-catenin binding activity; and protein C-terminus binding activity. Involved in positive regulation of transcription, DNA-templated. Localizes to cytosol and nucleus; PARTICIPATES IN estrogen signaling pathway; INTERACTS WITH 17beta-estradiol; aflatoxin B1; butanal.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: calcium-binding and coiled-coil domain-containing protein 1; calphoglin; Cocoa; coiled-coil coactivator protein; coiled-coil leucine zipper coactivator 1; inorganic pyrophosphatase activator; KIAA1536; PP13275; sarcoma antigen NY-SAR-3
Orthologs:
Mus musculus (house mouse) : Calcoco1 (calcium binding and coiled coil domain 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Calcoco1 (calcium binding and coiled coil domain 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Calcoco1 (calcium binding and coiled-coil domain 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CALCOCO1 (calcium binding and coiled-coil domain 1)
Canis lupus familiaris (dog) : CALCOCO1 (calcium binding and coiled-coil domain 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Calcoco1 (calcium binding and coiled-coil domain 1)
Sus scrofa (pig) : CALCOCO1 (calcium binding and coiled-coil domain 1)
Chlorocebus sabaeus (African green monkey) : CALCOCO1 (calcium binding and coiled-coil domain 1)
Heterocephalus glaber (naked mole-rat) : Calcoco1 (calcium binding and coiled-coil domain 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1253,708,517 - 53,727,745 (-)EnsemblGRCh38hg38GRCh38
GRCh381253,708,517 - 53,727,520 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371254,104,902 - 54,121,307 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361252,391,169 - 52,407,486 (-)NCBINCBI36hg18NCBI36
Build 341252,391,169 - 52,407,486NCBI
Celera1253,754,817 - 53,771,222 (-)NCBI
Cytogenetic Map12q13.13NCBI
HuRef1251,142,897 - 51,159,310 (-)NCBIHuRef
CHM1_11254,071,838 - 54,088,243 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on CALCOCO1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 731717
Created: 2004-01-12
Species: Homo sapiens
Last Modified: 2020-09-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.