Lipf (lipase, gastric) - Rat Genome Database

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Gene: Lipf (lipase, gastric) Mus musculus
Analyze
Symbol: Lipf
Name: lipase, gastric
RGD ID: 731696
MGI Page MGI
Description: Predicted to enable triglyceride lipase activity. Predicted to act upstream of or within lipid catabolic process. Predicted to be located in extracellular region. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in body wall mesenchyme. Orthologous to human LIPF (lipase F, gastric type).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310051B21Rik; AV082900; gastric lipase; gastric triacylglycerol lipase; GL
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391933,938,648 - 33,954,213 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1933,938,587 - 33,954,210 (+)EnsemblGRCm39 Ensembl
GRCm381933,961,248 - 33,976,813 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1933,961,187 - 33,976,810 (+)EnsemblGRCm38mm10GRCm38
MGSCv371934,035,738 - 34,051,303 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361934,027,245 - 34,042,810 (+)NCBIMGSCv36mm8
Celera1934,737,801 - 34,753,366 (+)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1929.29NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750   PMID:21873635  


Genomics

Comparative Map Data
Lipf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391933,938,648 - 33,954,213 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1933,938,587 - 33,954,210 (+)EnsemblGRCm39 Ensembl
GRCm381933,961,248 - 33,976,813 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1933,961,187 - 33,976,810 (+)EnsemblGRCm38mm10GRCm38
MGSCv371934,035,738 - 34,051,303 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361934,027,245 - 34,042,810 (+)NCBIMGSCv36mm8
Celera1934,737,801 - 34,753,366 (+)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1929.29NCBI
LIPF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381088,664,442 - 88,678,814 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1088,664,441 - 88,678,814 (+)EnsemblGRCh38hg38GRCh38
GRCh371090,424,199 - 90,438,571 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361090,414,074 - 90,428,552 (+)NCBINCBI36Build 36hg18NCBI36
Build 341090,414,195 - 90,428,542NCBI
Celera1084,170,927 - 84,185,402 (+)NCBICelera
Cytogenetic Map10q23.31NCBI
HuRef1084,058,693 - 84,073,122 (+)NCBIHuRef
CHM1_11090,706,220 - 90,720,626 (+)NCBICHM1_1
T2T-CHM13v2.01089,548,553 - 89,562,923 (+)NCBIT2T-CHM13v2.0
Lipf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81240,906,706 - 240,925,053 (+)NCBIGRCr8
mRatBN7.21231,493,498 - 231,511,845 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1231,493,498 - 231,511,845 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1239,877,083 - 239,895,430 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01246,806,295 - 246,824,661 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01239,644,366 - 239,662,731 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01252,284,464 - 252,302,811 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1252,284,464 - 252,302,811 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01259,507,653 - 259,526,000 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41237,838,238 - 237,856,579 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11238,005,561 - 238,020,602 (+)NCBI
Celera1228,607,481 - 228,625,828 (+)NCBICelera
Cytogenetic Map1q52NCBI
Lipf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554254,267,004 - 4,285,078 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554254,267,977 - 4,284,996 (-)NCBIChiLan1.0ChiLan1.0
LIPF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28100,682,450 - 100,696,947 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110100,687,930 - 100,702,262 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01085,389,165 - 85,403,492 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11088,892,525 - 88,906,898 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1088,892,525 - 88,906,898 (+)Ensemblpanpan1.1panPan2
LIPF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12638,469,876 - 38,486,881 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2638,424,721 - 38,588,175 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2638,286,752 - 38,303,738 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02640,054,032 - 40,071,028 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2640,054,032 - 40,071,016 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12637,893,844 - 37,910,828 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02637,489,480 - 37,506,494 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02638,759,547 - 38,776,548 (+)NCBIUU_Cfam_GSD_1.0
Lipf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721378,221,590 - 78,239,486 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936735553,438 - 568,021 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936735553,438 - 568,021 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LIPF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1982,095,036 - 82,107,539 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl982,095,601 - 82,106,765 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604842,772,803 - 42,786,976 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lipf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479114,961,557 - 14,972,238 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479114,961,554 - 14,972,310 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Lipf
368 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:50
Count of miRNA genes:48
Interacting mature miRNAs:50
Transcripts:ENSMUST00000025680
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19930571543305821Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19978745343787602Mouse
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
10413881Moe2_mmodifier of epilepsy 2 (mouse)191492301648923138Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191591260749912719Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191591260749912719Mouse
1302063Eae19_mexperimental allergic encephalomyelitis 19 (mouse)Not determined191829516252295381Mouse
1302004Lfp2_mlong free running period 2 (mouse)Not determined191829516252295381Mouse
4142343Moen2_mmodifier of engrailed QTL 2 (mouse)Not determined192023431454234461Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192023431454234461Mouse
4141659Pbwg20_mpostnatal body weight growth 20 (mouse)Not determined192137870555378928Mouse
1558876W3q14_mweight 3 weeks QTL 14 (mouse)Not determined192231332653911504Mouse
12790634Ebm1_mEpidermolysis Bullosa modifier 1 (mouse)192498843958988439Mouse
1302123Tlsr8_mthymic lymphoma suppressor region 8 (mouse)Not determined192513600242388916Mouse
1301451Ath16_matherosclerosis 16 (mouse)Not determined192542691759427005Mouse
13506250Renmq1_mrenal mercury accumulation QTL 1 (mouse)192738559461385705Mouse
1357568Tgct4_mtesticular germ cell tumor 4 (mouse)Not determined192777198535295381Mouse
4141138Femwf11_mfemur work to failure 11 (mouse)Not determined2814034861420004Mouse
1300683Fembm7_mfemoral bone morphometry 7 (mouse)Not determined193014122461420004Mouse
1301942Pas13_mpulmonary adenoma susceptibility 13 (mouse)Not determined193014123161420004Mouse
1301410Cd8mts6_mCD8 memory T cell subset 6 (mouse)Not determined193014123161420004Mouse
1300856Nobq2_mNew Zealand obese QTL 2 (mouse)Not determined193089788061420004Mouse
1301741Lith2_mlithogenic gene 2 (mouse)Not determined193299215861420004Mouse
1301639Stnn_mstriatal neuron number (mouse)Not determined193395195261420004Mouse

Markers in Region
AV082900  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381933,976,646 - 33,976,735UniSTSGRCm38
MGSCv371934,051,136 - 34,051,225UniSTSGRCm37
Celera1934,753,199 - 34,753,288UniSTS
Cytogenetic Map19C1UniSTS
Whitehead/MRC_RH19330.94UniSTS
Lipf  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19C1UniSTS
cM Map1929.29UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_026334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC098875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC102119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000025680   ⟹   ENSMUSP00000025680
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1933,938,587 - 33,954,210 (+)Ensembl
GRCm38.p6 Ensembl1933,961,187 - 33,976,810 (+)Ensembl
RefSeq Acc Id: NM_026334   ⟹   NP_080610
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391933,938,648 - 33,954,213 (+)NCBI
GRCm381933,961,248 - 33,976,813 (+)NCBI
MGSCv371934,035,738 - 34,051,303 (+)RGD
Celera1934,737,801 - 34,753,366 (+)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017318280   ⟹   XP_017173769
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391933,941,889 - 33,954,205 (+)NCBI
GRCm381933,964,489 - 33,976,805 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_080610 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173769 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH61067 (Get FASTA)   NCBI Sequence Viewer  
  BAB26201 (Get FASTA)   NCBI Sequence Viewer  
  BAB26240 (Get FASTA)   NCBI Sequence Viewer  
  BAB26272 (Get FASTA)   NCBI Sequence Viewer  
  BAB26280 (Get FASTA)   NCBI Sequence Viewer  
  BAB26283 (Get FASTA)   NCBI Sequence Viewer  
  BAB26287 (Get FASTA)   NCBI Sequence Viewer  
  BAB26300 (Get FASTA)   NCBI Sequence Viewer  
  BAB26312 (Get FASTA)   NCBI Sequence Viewer  
  BAB26313 (Get FASTA)   NCBI Sequence Viewer  
  BAB26316 (Get FASTA)   NCBI Sequence Viewer  
  BAB26338 (Get FASTA)   NCBI Sequence Viewer  
  BAB26339 (Get FASTA)   NCBI Sequence Viewer  
  BAB26346 (Get FASTA)   NCBI Sequence Viewer  
  BAB26350 (Get FASTA)   NCBI Sequence Viewer  
  BAB26352 (Get FASTA)   NCBI Sequence Viewer  
  BAB26359 (Get FASTA)   NCBI Sequence Viewer  
  BAB26368 (Get FASTA)   NCBI Sequence Viewer  
  BAB26370 (Get FASTA)   NCBI Sequence Viewer  
  BAB26466 (Get FASTA)   NCBI Sequence Viewer  
  BAB26495 (Get FASTA)   NCBI Sequence Viewer  
  BAB26556 (Get FASTA)   NCBI Sequence Viewer  
  BAB26629 (Get FASTA)   NCBI Sequence Viewer  
  BAB26647 (Get FASTA)   NCBI Sequence Viewer  
  BAB26651 (Get FASTA)   NCBI Sequence Viewer  
  BAB26656 (Get FASTA)   NCBI Sequence Viewer  
  BAB26673 (Get FASTA)   NCBI Sequence Viewer  
  BAB26675 (Get FASTA)   NCBI Sequence Viewer  
  BAB26697 (Get FASTA)   NCBI Sequence Viewer  
  BAB26703 (Get FASTA)   NCBI Sequence Viewer  
  BAB26704 (Get FASTA)   NCBI Sequence Viewer  
  BAB26711 (Get FASTA)   NCBI Sequence Viewer  
  BAB26715 (Get FASTA)   NCBI Sequence Viewer  
  BAB26716 (Get FASTA)   NCBI Sequence Viewer  
  BAB26725 (Get FASTA)   NCBI Sequence Viewer  
  BAB26733 (Get FASTA)   NCBI Sequence Viewer  
  BAB26746 (Get FASTA)   NCBI Sequence Viewer  
  BAB26766 (Get FASTA)   NCBI Sequence Viewer  
  BAB26784 (Get FASTA)   NCBI Sequence Viewer  
  BAB26787 (Get FASTA)   NCBI Sequence Viewer  
  BAC36048 (Get FASTA)   NCBI Sequence Viewer  
  EDL41737 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000025680
  ENSMUSP00000025680.5
GenBank Protein Q9CPP7 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_080610   ⟸   NM_026334
- Peptide Label: precursor
- UniProtKB: Q9D798 (UniProtKB/Swiss-Prot),   Q9D796 (UniProtKB/Swiss-Prot),   Q9D767 (UniProtKB/Swiss-Prot),   Q9D766 (UniProtKB/Swiss-Prot),   Q9D760 (UniProtKB/Swiss-Prot),   Q9D6X0 (UniProtKB/Swiss-Prot),   Q9D6T5 (UniProtKB/Swiss-Prot),   Q9D6S5 (UniProtKB/Swiss-Prot),   Q9D6Q6 (UniProtKB/Swiss-Prot),   Q9D6Q3 (UniProtKB/Swiss-Prot),   Q9D6Q2 (UniProtKB/Swiss-Prot),   Q9D6P3 (UniProtKB/Swiss-Prot),   Q9D6N8 (UniProtKB/Swiss-Prot),   Q9D6M9 (UniProtKB/Swiss-Prot),   Q9D6L9 (UniProtKB/Swiss-Prot),   Q9D6L1 (UniProtKB/Swiss-Prot),   Q9CPP8 (UniProtKB/Swiss-Prot),   Q8BK78 (UniProtKB/Swiss-Prot),   Q9D7C5 (UniProtKB/Swiss-Prot),   Q9CPP7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017173769   ⟸   XM_017318280
- Peptide Label: isoform X1
- UniProtKB: Q9D798 (UniProtKB/Swiss-Prot),   Q9D796 (UniProtKB/Swiss-Prot),   Q9D767 (UniProtKB/Swiss-Prot),   Q9D766 (UniProtKB/Swiss-Prot),   Q9D760 (UniProtKB/Swiss-Prot),   Q9D6X0 (UniProtKB/Swiss-Prot),   Q9D6T5 (UniProtKB/Swiss-Prot),   Q9D6S5 (UniProtKB/Swiss-Prot),   Q9D6Q6 (UniProtKB/Swiss-Prot),   Q9D6Q3 (UniProtKB/Swiss-Prot),   Q9D6Q2 (UniProtKB/Swiss-Prot),   Q9D6P3 (UniProtKB/Swiss-Prot),   Q9D6N8 (UniProtKB/Swiss-Prot),   Q9D6M9 (UniProtKB/Swiss-Prot),   Q9D6L9 (UniProtKB/Swiss-Prot),   Q9D6L1 (UniProtKB/Swiss-Prot),   Q9CPP8 (UniProtKB/Swiss-Prot),   Q8BK78 (UniProtKB/Swiss-Prot),   Q9D7C5 (UniProtKB/Swiss-Prot),   Q9CPP7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000025680   ⟸   ENSMUST00000025680
Protein Domains
AB hydrolase-1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CPP7-F1-model_v2 AlphaFold Q9CPP7 1-395 view protein structure

Promoters
RGD ID:13679288
Promoter ID:EPDNEW_M23793
Type:multiple initiation site
Name:Lipf_1
Description:Mus musculus lipase, gastric , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381933,961,248 - 33,961,308EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914967 AgrOrtholog
Ensembl Genes ENSMUSG00000024768 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000025680 ENTREZGENE
  ENSMUST00000025680.5 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot
InterPro AB_hydrolase UniProtKB/Swiss-Prot
  AB_hydrolase_lipase UniProtKB/Swiss-Prot
  Lipase_euk UniProtKB/Swiss-Prot
KEGG Report mmu:67717 UniProtKB/Swiss-Prot
MGD MGI:1914967 ENTREZGENE
NCBI Gene 67717 ENTREZGENE
PANTHER LYSOSOMAL ACID LIPASE-RELATED UniProtKB/Swiss-Prot
  PTHR11005:SF15 UniProtKB/Swiss-Prot
Pfam Abhydro_lipase UniProtKB/Swiss-Prot
PhenoGen Lipf PhenoGen
PIRSF Steryl_ester_lip UniProtKB/Swiss-Prot
PROSITE LIPASE_SER UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53474 UniProtKB/Swiss-Prot
UniProt LIPG_MOUSE UniProtKB/Swiss-Prot
  Q8BK78 ENTREZGENE
  Q9CPP7 ENTREZGENE
  Q9CPP8 ENTREZGENE
  Q9D6L1 ENTREZGENE
  Q9D6L9 ENTREZGENE
  Q9D6M9 ENTREZGENE
  Q9D6N8 ENTREZGENE
  Q9D6P3 ENTREZGENE
  Q9D6Q2 ENTREZGENE
  Q9D6Q3 ENTREZGENE
  Q9D6Q6 ENTREZGENE
  Q9D6S5 ENTREZGENE
  Q9D6T5 ENTREZGENE
  Q9D6X0 ENTREZGENE
  Q9D760 ENTREZGENE
  Q9D766 ENTREZGENE
  Q9D767 ENTREZGENE
  Q9D796 ENTREZGENE
  Q9D798 ENTREZGENE
  Q9D7C5 ENTREZGENE
UniProt Secondary Q8BK78 UniProtKB/Swiss-Prot
  Q9CPP8 UniProtKB/Swiss-Prot
  Q9D6L1 UniProtKB/Swiss-Prot
  Q9D6L9 UniProtKB/Swiss-Prot
  Q9D6M9 UniProtKB/Swiss-Prot
  Q9D6N8 UniProtKB/Swiss-Prot
  Q9D6P3 UniProtKB/Swiss-Prot
  Q9D6Q2 UniProtKB/Swiss-Prot
  Q9D6Q3 UniProtKB/Swiss-Prot
  Q9D6Q6 UniProtKB/Swiss-Prot
  Q9D6S5 UniProtKB/Swiss-Prot
  Q9D6T5 UniProtKB/Swiss-Prot
  Q9D6X0 UniProtKB/Swiss-Prot
  Q9D760 UniProtKB/Swiss-Prot
  Q9D766 UniProtKB/Swiss-Prot
  Q9D767 UniProtKB/Swiss-Prot
  Q9D796 UniProtKB/Swiss-Prot
  Q9D798 UniProtKB/Swiss-Prot
  Q9D7C5 UniProtKB/Swiss-Prot