Slc2a4 (solute carrier family 2 (facilitated glucose transporter), member 4) - Rat Genome Database
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Gene: Slc2a4 (solute carrier family 2 (facilitated glucose transporter), member 4) Mus musculus
Symbol: Slc2a4
Name: solute carrier family 2 (facilitated glucose transporter), member 4
RGD ID: 731479
Description: Is expressed in several structures, including adipose tissue; adrenal gland; alimentary system; brain; and genitourinary system. Used to study type 2 diabetes mellitus. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human SLC2A4 (solute carrier family 2 member 4); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; INTERACTS WITH (-)-epigallocatechin 3-gallate; 1,1-dichloroethene; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: glucose transporter type 4, insulin-responsive; Glut; Glut-; Glut-4; Glut4; GT2; solute carrier family 2, facilitated glucose transporter member 4; twgy
RGD Orthologs
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm391169,833,112 - 69,839,040 (-)NCBIGRCm39mm39
GRCm39 Ensembl1169,833,365 - 69,839,014 (-)Ensembl
GRCm381169,942,286 - 69,948,216 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,942,539 - 69,948,188 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,755,788 - 69,761,692 (-)NCBIGRCm37mm9NCBIm37
MGSCv361169,758,738 - 69,764,329 (-)NCBImm8
Celera1177,490,257 - 77,496,161 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.93NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (EXP)
(R)-carnitine  (ISO)
(R,R)-tramadol  (ISO)
(S)-naringenin  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1,3-thiazolidine-2,4-dione  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-amino-2-deoxy-D-glucopyranose  (EXP,ISO)
2-chloroethanol  (EXP)
2-deoxy-D-glucose  (EXP,ISO)
3,3',5'-triiodo-L-thyronine  (ISO)
3,3',5'-triiodothyronine  (ISO)
3,3',5-triiodo-L-thyronine  (EXP)
3,5-diethoxycarbonyl-1,4-dihydrocollidine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
3-phenylprop-2-enal  (ISO)
4-methyl-2-oxopentanoic acid  (EXP)
4-phenylbutyric acid  (ISO)
5-(tetradecyloxy)-2-furoic acid  (EXP)
6-propyl-2-thiouracil  (ISO)
9-cis,11-trans-octadecadienoic acid  (EXP)
9-cis-retinoic acid  (ISO)
acarbose  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
AICA ribonucleotide  (EXP,ISO)
aldehydo-D-glucosamine  (EXP,ISO)
aldehydo-D-glucose  (EXP,ISO)
all-trans-retinoic acid  (ISO)
alloxan  (EXP,ISO)
ammonium chloride  (ISO)
apigenin  (EXP)
arecoline  (ISO)
arotinoid acid  (ISO)
arsenite(3-)  (EXP,ISO)
atorvastatin calcium  (EXP)
benzo[a]pyrene  (EXP,ISO)
berberine  (ISO)
beta-carotene  (EXP)
beta-D-glucosamine  (EXP,ISO)
beta-hexachlorocyclohexane  (ISO)
bexarotene  (ISO)
bezafibrate  (EXP)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
boric acid  (EXP)
butan-1-ol  (ISO)
butanal  (ISO)
butyric acid  (EXP)
cadmium dichloride  (EXP)
calcitriol  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
capsaicin  (EXP)
carbon nanotube  (EXP)
chloroethene  (EXP)
chlorogenic acid  (EXP)
chloroquine  (ISO)
chromium atom  (EXP,ISO)
chromium(3+) trichloride  (EXP)
chromium(6+)  (ISO)
ciguatoxin CTX1B  (EXP)
cinnamic acid  (EXP)
cis-caffeic acid  (EXP)
cobalt dichloride  (ISO)
colforsin daropate hydrochloride  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
corticosterone  (EXP,ISO)
cortisone  (EXP)
D-glucose  (EXP,ISO)
decabromodiphenyl ether  (EXP)
Deoxycorticosterone acetate  (ISO)
desferrioxamine B  (ISO)
dexamethasone  (EXP,ISO)
diazinon  (ISO)
dimercaprol  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
divanadium pentaoxide  (EXP)
dopamine  (ISO)
dorsomorphin  (EXP)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
eugenol  (EXP,ISO)
fenoldopam  (ISO)
ferulic acid  (EXP)
fipronil  (EXP)
fisetin  (EXP)
fructose  (ISO)
fulvestrant  (ISO)
Fusaric acid  (EXP)
gallein  (ISO)
genistein  (EXP,ISO)
gingerol  (EXP)
ginsenoside Re  (EXP,ISO)
glucose  (EXP,ISO)
glutathione disulfide  (EXP)
glyburide  (ISO)
glyphosate  (ISO)
haloperidol  (ISO)
hemin  (ISO)
heptachlor  (ISO)
hesperidin  (EXP)
hexachlorobenzene  (ISO)
hexadecanoic acid  (ISO)
hydrazines  (EXP)
imidacloprid  (EXP,ISO)
Indeno[1,2,3-cd]pyrene  (EXP)
indinavir  (ISO)
indometacin  (EXP)
isoliquiritigenin  (EXP)
isoprenaline  (ISO)
isotretinoin  (ISO)
ivermectin  (EXP)
kaempferol  (EXP)
L-ascorbic acid  (EXP,ISO)
L-methionine  (EXP)
leflunomide  (ISO)
letrozole  (ISO)
lipopolysaccharide  (EXP)
luteolin  (EXP)
LY294002  (EXP)
mangiferin  (EXP,ISO)
melatonin  (EXP,ISO)
meldonium  (EXP)
mercury atom  (ISO)
mercury dichloride  (EXP)
mercury(0)  (ISO)
metformin  (EXP,ISO)
methapyrilene  (ISO)
methyl pyruvate  (EXP)
methylmercury chloride  (EXP)
mirtazapine  (ISO)
mono(2-ethylhexyl) phthalate  (EXP,ISO)
monomethyl succinate  (EXP)
monosodium L-glutamate  (EXP,ISO)
myrtenal  (ISO)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (EXP)
N-acetyl-L-cysteine  (EXP)
naloxone  (ISO)
naringin  (EXP)
nicotinamide  (ISO)
nicotinic acid  (ISO)
Niflumic acid  (EXP)
nimesulide  (EXP)
olanzapine  (ISO)
orientin  (EXP)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
permethrin  (EXP)
phenylarsine oxide  (EXP,ISO)
picolinic acid  (EXP)
pioglitazone  (ISO)
pirinixic acid  (EXP)
platycodin D  (EXP)
plumbagin  (ISO)
pravastatin  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
prochloraz  (ISO)
progesterone  (ISO)
propanal  (ISO)
prostaglandin J2  (ISO)
psoralen  (ISO)
Pyridostigmine bromide  (EXP)
pyruvic acid  (EXP)
quercetin  (EXP,ISO)
raffinose  (EXP,ISO)
raloxifene  (ISO)
resveratrol  (EXP,ISO)
rimonabant  (EXP)
rofecoxib  (EXP)
Rutamarin  (EXP)
sarpogrelate  (ISO)
sildenafil citrate  (EXP)
silibinin  (EXP)
silicon dioxide  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium azide  (ISO)
sodium chloride  (ISO)
sodium dichromate  (EXP)
streptozocin  (EXP,ISO)
sucrose  (EXP,ISO)
sulforaphane  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
taurine  (ISO)
tauroursodeoxycholic acid  (ISO)
testosterone  (ISO)
theaflavin  (EXP)
thiazolidinediones  (EXP)
thyroxine  (EXP)
titanium dioxide  (EXP)
tramadol  (ISO)
trans-caffeic acid  (EXP)
trans-cinnamic acid  (EXP)
tributylstannane  (EXP)
trichloroethene  (EXP,ISO)
triclosan  (EXP,ISO)
Triptolide  (EXP,ISO)
troglitazone  (EXP,ISO)
U-73122  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
valsartan  (ISO)
vanadium atom  (ISO)
vanadium(0)  (ISO)
vancomycin  (EXP)
venlafaxine hydrochloride  (ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
wortmannin  (EXP,ISO)
zaragozic acid A  (EXP,ISO)
zidovudine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal cardiovascular system physiology  (IAGP)
abnormal circulating glucose level  (IAGP)
abnormal glucose homeostasis  (IAGP)
abnormal glucose tolerance  (IAGP)
abnormal glycogen homeostasis  (IAGP)
abnormal heart morphology  (IAGP)
abnormal lipid homeostasis  (IAGP)
abnormal lipid level  (IAGP)
abnormal muscle physiology  (IAGP)
abnormal myocardium layer morphology  (IAGP)
abnormal nervous system physiology  (IAGP)
abnormal response to cardiac infarction  (IAGP)
abnormal skeletal muscle fiber type ratio  (IAGP)
cardiac hypertrophy  (IAGP)
cardiac interstitial fibrosis  (IAGP)
decreased adipocyte glucose uptake  (IAGP)
decreased body mass index  (IAGP)
decreased body weight  (IAGP)
decreased cardiac cell glucose uptake  (IAGP)
decreased circulating free fatty acids level  (IAGP)
decreased circulating insulin level  (IAGP)
decreased circulating ketone body level  (IAGP)
decreased fatty acids level  (IAGP)
decreased gonadal fat pad weight  (IAGP)
decreased insulin secretion  (IAGP)
decreased intestinal glucose absorption  (IAGP)
decreased left ventricle systolic pressure  (IAGP)
decreased muscle cell glucose uptake  (IAGP)
decreased skeletal muscle glycogen level  (IAGP)
decreased skeletal muscle mass  (IAGP)
decreased total body fat amount  (IAGP)
decreased triglyceride level  (IAGP)
dystrophic cardiac calcinosis  (IAGP)
heart inflammation  (IAGP)
hepatic steatosis  (IAGP)
hyperglycemia  (IAGP)
hypertension  (IAGP)
impaired glucose tolerance  (IAGP)
impaired skeletal muscle contractility  (IAGP)
increased adipocyte glucose uptake  (IAGP)
increased cardiac cell glucose uptake  (IAGP)
increased cardiac muscle glycogen level  (IAGP)
increased circulating glucose level  (IAGP)
increased circulating insulin level  (IAGP)
increased fat cell size  (IAGP)
increased heart weight  (IAGP)
increased insulin secretion  (IAGP)
increased liver glycogen level  (IAGP)
increased muscle cell glucose uptake  (IAGP)
insulin resistance  (IAGP)
macrovesicular hepatic steatosis  (IAGP)
muscle fatigue  (IAGP)
myocardium necrosis  (IAGP)
pancreatic islet hyperplasia  (IAGP)
postnatal growth retardation  (IAGP)
premature death  (IAGP)
thick ventricular wall  (IAGP)

References - curated
1. Bouche C, etal., Endocr Rev. 2004 Oct;25(5):807-30.
2. Broderick TL and King TM, Med Sci Monit. 2008 Dec;14(12):BR261-4.
3. Doehner W, etal., Int J Cardiol. 2008 Sep 6.
4. Holman GD, etal., J Biol Chem. 1990 Oct 25;265(30):18172-9.
5. Kim JO, etal., Biol Pharm Bull. 2009 Mar;32(3):421-6.
6. Kusari J, etal., J Clin Invest. 1991 Oct;88(4):1323-30.
7. Larance M, etal., Mol Endocrinol. 2008 Feb;22(2):226-33. Epub 2007 Aug 23.
8. MGD and Homologene mouse data transfer
9. MGD data from the GO Consortium
11. OMIM Disease Annotation Pipeline
12. Pipeline to import KEGG annotations from KEGG into RGD
13. Pipeline to import Pathway Interaction Database annotations from NCI into RGD
14. Pipeline to import SMPDB annotations from SMPDB into RGD
15. RGD automated import pipeline
16. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
17. RGD automated import pipeline for gene-chemical interactions
18. Ricort JM, etal., FEBS Lett. 1994 Jun 20;347(1):42-4.
19. Scheepers A, etal., JPEN J Parenter Enteral Nutr. 2004 Sep-Oct;28(5):364-71.
20. Sennott J, etal., Pathophysiology. 2008 Oct;15(3):173-9. Epub 2008 Jul 23.
21. Tardy-Cantalupi I, etal., J Mol Cell Cardiol. 1999 May;31(5):1143-55.
22. Vaughan KT, etal., Genomics 1996 Aug 15;36(1):29-38.
23. Watson RT and Pessin JE, Cell Signal. 2007 Nov;19(11):2209-17. Epub 2007 Jun 21.
24. Zaid H, etal., Biochem J. 2008 Jul 15;413(2):201-15.
Additional References at PubMed
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PMID:8449498   PMID:8471042   PMID:8487016   PMID:8520534   PMID:8546674   PMID:8607873   PMID:8631845   PMID:8683100   PMID:8698853   PMID:8707843   PMID:8798515   PMID:8866555  
PMID:8870666   PMID:8956150   PMID:9003403   PMID:9177778   PMID:9239415   PMID:9312184   PMID:9334720   PMID:9367348   PMID:9421462   PMID:9452485   PMID:9494081   PMID:9514916  
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PMID:17050538   PMID:17050738   PMID:17059388   PMID:17139247   PMID:17189206   PMID:17189207   PMID:17220298   PMID:17274760   PMID:17316549   PMID:17339344   PMID:17341582   PMID:17369465  
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PMID:17765682   PMID:17846641   PMID:17854769   PMID:17916632   PMID:17947242   PMID:17953366   PMID:17977960   PMID:18003705   PMID:18037994   PMID:18063571   PMID:18076383   PMID:18191142  
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PMID:21847688   PMID:21873635   PMID:21907143   PMID:21910807   PMID:21952243   PMID:22002247   PMID:22016564   PMID:22221582   PMID:22226978   PMID:22247557   PMID:22253718   PMID:22262463  
PMID:22297303   PMID:22383310   PMID:22384078   PMID:22389706   PMID:22466288   PMID:22473005   PMID:22488520   PMID:22609160   PMID:22610098   PMID:22681646   PMID:22687245   PMID:22689584  
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PMID:23325788   PMID:23349485   PMID:23444368   PMID:23462193   PMID:23474483   PMID:23630302   PMID:23639858   PMID:23665562   PMID:23690974   PMID:23741049   PMID:23744065   PMID:23749168  
PMID:23800645   PMID:23804653   PMID:23877319   PMID:23907538   PMID:23966466   PMID:23967220   PMID:23968980   PMID:24039053   PMID:24086110   PMID:24101677   PMID:24169049   PMID:24190036  
PMID:24240093   PMID:24303141   PMID:24381004   PMID:24438685   PMID:24619881   PMID:24632207   PMID:24664951   PMID:24705589   PMID:24717514   PMID:24778187   PMID:24895284   PMID:24932807  
PMID:24937386   PMID:24970747   PMID:25011668   PMID:25025572   PMID:25143251   PMID:25187366   PMID:25233421   PMID:25299671   PMID:25528561   PMID:25575350   PMID:25596527   PMID:25615793  
PMID:25669099   PMID:25677552   PMID:25733684   PMID:25824042   PMID:25944897   PMID:25983323   PMID:26015432   PMID:26071524   PMID:26168218   PMID:26200093   PMID:26220403   PMID:26240143  
PMID:26299925   PMID:26336159   PMID:26339590   PMID:26449747   PMID:26455966   PMID:26467261   PMID:26474534   PMID:26527681   PMID:26546360   PMID:26572137   PMID:26629404   PMID:26720696  
PMID:26832303   PMID:27061726   PMID:27076519   PMID:27193720   PMID:27226625   PMID:27345255   PMID:27354378   PMID:27411383   PMID:27597886   PMID:27598258   PMID:27631639   PMID:27689415  
PMID:27694478   PMID:27739494   PMID:27740873   PMID:27797912   PMID:27888215   PMID:27966485   PMID:28009298   PMID:28057756   PMID:28079283   PMID:28189688   PMID:28245920   PMID:28279980  
PMID:28324027   PMID:28325821   PMID:28364022   PMID:28450454   PMID:28490443   PMID:28688716   PMID:28739602   PMID:28750406   PMID:28822962   PMID:28853753   PMID:28916720   PMID:29133412  
PMID:29188534   PMID:29222456   PMID:29291943   PMID:29341802   PMID:29540328   PMID:29723855   PMID:29728617   PMID:29773651   PMID:29791847   PMID:30228991   PMID:30232223   PMID:30254016  
PMID:30275758   PMID:30389528   PMID:30528377   PMID:30654941   PMID:30707251   PMID:30710396   PMID:30841444   PMID:30886164   PMID:30904610   PMID:30943117   PMID:31059591   PMID:31882430  


Comparative Map Data
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm391169,833,112 - 69,839,040 (-)NCBIGRCm39mm39
GRCm39 Ensembl1169,833,365 - 69,839,014 (-)Ensembl
GRCm381169,942,286 - 69,948,216 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,942,539 - 69,948,188 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,755,788 - 69,761,692 (-)NCBIGRCm37mm9NCBIm37
MGSCv361169,758,738 - 69,764,329 (-)NCBImm8
Celera1177,490,257 - 77,496,161 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.93NCBI
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38.p13 Ensembl177,281,718 - 7,288,257 (+)EnsemblGRCh38hg38GRCh38
GRCh38177,281,718 - 7,288,257 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37177,185,037 - 7,191,576 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,125,778 - 7,132,091 (+)NCBINCBI36hg18NCBI36
Build 34177,125,834 - 7,131,125NCBI
Celera177,209,701 - 7,216,014 (+)NCBI
Cytogenetic Map17p13.1NCBI
HuRef177,076,412 - 7,082,727 (+)NCBIHuRef
CHM1_1177,193,837 - 7,200,150 (+)NCBICHM1_1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
mRatBN7.21054,666,015 - 54,671,581 (-)NCBI
Rnor_6.0 Ensembl1056,552,983 - 56,558,487 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01056,552,921 - 56,558,562 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01056,298,102 - 56,303,687 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,786,705 - 56,792,209 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11056,800,327 - 56,805,832 (-)NCBI
Celera1053,819,953 - 53,825,446 (-)NCBICelera
Cytogenetic Map10q24NCBI
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
ChiLan1.0 EnsemblNW_0049554679,630,304 - 9,636,005 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,630,304 - 9,636,005 (-)NCBIChiLan1.0ChiLan1.0
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
PanPan1.1177,299,966 - 7,306,344 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,299,966 - 7,306,344 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0177,312,605 - 7,319,430 (+)NCBIMhudiblu_PPA_v0panPan3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
CanFam3.1 Ensembl532,238,095 - 32,244,021 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1532,238,095 - 32,244,022 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
SpeTri2.0NW_004936595567,267 - 574,051 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
Sscrofa11.1 Ensembl1252,628,450 - 52,634,967 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,628,746 - 52,634,965 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21254,810,360 - 54,816,580 (-)NCBISscrofa10.2Sscrofa10.2susScr3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
ChlSab1.1166,654,626 - 6,660,640 (+)NCBI
ChlSab1.1 Ensembl166,654,608 - 6,661,495 (+)Ensembl
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
HetGla 1.0NW_0046247869,903,176 - 9,908,953 (+)NCBI

Position Markers
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381169,948,476 - 69,948,623UniSTSGRCm38
MGSCv371169,761,978 - 69,762,125UniSTSGRCm37
Celera1177,496,447 - 77,496,594UniSTS
Cytogenetic Map11C-E1UniSTS
cM Map1140.0UniSTS
cM Map1339.0UniSTS
Whitehead Genetic1137.2UniSTS
Whitehead_YAC11 UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381169,942,716 - 69,942,846UniSTSGRCm38
MGSCv371169,756,218 - 69,756,348UniSTSGRCm37
Celera1177,490,687 - 77,490,817UniSTS
Cytogenetic Map11C-E1UniSTS
cM Map1140.0UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11C-E1UniSTS
cM Map1140.0UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381169,948,423 - 69,948,614UniSTSGRCm38
MGSCv371169,761,925 - 69,762,116UniSTSGRCm37
Celera1177,496,394 - 77,496,585UniSTS
Cytogenetic Map11C-E1UniSTS
cM Map1140.0UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11C-E1UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11C-E1UniSTS

QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116910000072600000Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116910000072600000Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116910000072600000Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116910000072600000Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116910000072600000Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116910000072600000Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116910000072600000Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116910000072600000Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116910000072600000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1746
Count of miRNA genes:675
Interacting mature miRNAs:846
Transcripts:ENSMUST00000018710, ENSMUST00000135437, ENSMUST00000141837, ENSMUST00000142500, ENSMUST00000152487, ENSMUST00000178363, ENSMUST00000178809, ENSMUST00000179298
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (
For more information about miRGate, see PMID:25858286 or access the full paper here.



Nucleotide Sequences
RefSeq Transcripts NM_001359114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB008453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY902342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY096615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY226822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR933541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS419213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M23383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M29660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000018710   ⟹   ENSMUSP00000018710
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,942,543 - 69,948,149 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135437   ⟹   ENSMUSP00000137092
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,946,069 - 69,948,154 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141837   ⟹   ENSMUSP00000136806
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,943,792 - 69,948,164 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142500   ⟹   ENSMUSP00000137463
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,945,908 - 69,948,188 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152487   ⟹   ENSMUSP00000136504
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,945,269 - 69,947,974 (-)Ensembl
RefSeq Acc Id: ENSMUST00000178363   ⟹   ENSMUSP00000136455
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,945,269 - 69,948,147 (-)Ensembl
RefSeq Acc Id: ENSMUST00000178809
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,942,539 - 69,948,175 (-)Ensembl
RefSeq Acc Id: ENSMUST00000179298   ⟹   ENSMUSP00000136726
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1169,945,563 - 69,948,145 (-)Ensembl
RefSeq Acc Id: NM_001359114   ⟹   NP_001346043
RefSeq Status: VALIDATED
Mouse AssemblyChrPosition (strand)Source
GRCm391169,833,112 - 69,839,023 (-)NCBI
GRCm381169,942,286 - 69,948,197 (-)NCBI
RefSeq Acc Id: NM_009204   ⟹   NP_033230
RefSeq Status: VALIDATED
Mouse AssemblyChrPosition (strand)Source
GRCm391169,833,112 - 69,839,016 (-)NCBI
GRCm381169,942,286 - 69,948,190 (-)NCBI
MGSCv371169,755,788 - 69,761,692 (-)RGD
Celera1177,490,257 - 77,496,161 (-)RGD
RefSeq Acc Id: XM_006532654   ⟹   XP_006532717
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,833,364 - 69,838,251 (-)NCBI
GRCm381169,942,538 - 69,947,430 (-)NCBI
RefSeq Acc Id: XM_006532655   ⟹   XP_006532718
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,833,364 - 69,839,040 (-)NCBI
GRCm381169,942,538 - 69,948,216 (-)NCBI
RefSeq Acc Id: XM_030245725   ⟹   XP_030101585
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,833,364 - 69,839,040 (-)NCBI
GRCm381169,942,538 - 69,948,216 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_033230   ⟸   NM_009204
- Peptide Label: isoform 1
- UniProtKB: P14142 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006532718   ⟸   XM_006532655
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006532717   ⟸   XM_006532654
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001346043   ⟸   NM_001359114
- Peptide Label: isoform 2
RefSeq Acc Id: XP_030101585   ⟸   XM_030245725
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000136455   ⟸   ENSMUST00000178363
RefSeq Acc Id: ENSMUSP00000136504   ⟸   ENSMUST00000152487
RefSeq Acc Id: ENSMUSP00000136726   ⟸   ENSMUST00000179298
RefSeq Acc Id: ENSMUSP00000137092   ⟸   ENSMUST00000135437
RefSeq Acc Id: ENSMUSP00000137463   ⟸   ENSMUST00000142500
RefSeq Acc Id: ENSMUSP00000018710   ⟸   ENSMUST00000018710
RefSeq Acc Id: ENSMUSP00000136806   ⟸   ENSMUST00000141837
Protein Domains

RGD ID:6822128
Promoter ID:MM_KWN:8154
SO ACC ID:SO:0000170
Tissues & Cell Lines:Kidney,   Spleen
Mouse AssemblyChrPosition (strand)Source
MGSCv361169,758,489 - 69,758,989 (-)MPROMDB
RGD ID:6820953
Promoter ID:MM_KWN:8155
SO ACC ID:SO:0000170
Tissues & Cell Lines:3T3L1_Day4,   Kidney,   Liver,   Lung
Transcripts:NM_009204,   OTTMUST00000013538,   OTTMUST00000013539,   OTTMUST00000013540,   UC007JSY.1,   UC007JTA.1
Mouse AssemblyChrPosition (strand)Source
MGSCv361169,761,594 - 69,762,094 (-)MPROMDB
RGD ID:8675260
Promoter ID:EPDNEW_M15660
Type:initiation region
Description:Mus musculus solute carrier family 2 , member 4 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database,
Experiment Methods:Single-end sequencing.
Mouse AssemblyChrPosition (strand)Source
GRCm381169,948,161 - 69,948,221EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95758 AgrOrtholog
Ensembl Genes ENSMUSG00000018566 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000018710 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000136455 UniProtKB/TrEMBL
  ENSMUSP00000136504 UniProtKB/TrEMBL
  ENSMUSP00000136726 UniProtKB/TrEMBL
  ENSMUSP00000136806 UniProtKB/TrEMBL
  ENSMUSP00000137092 UniProtKB/TrEMBL
  ENSMUSP00000137463 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000018710 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000135437 UniProtKB/TrEMBL
  ENSMUST00000141837 UniProtKB/TrEMBL
  ENSMUST00000142500 UniProtKB/TrEMBL
  ENSMUST00000152487 UniProtKB/TrEMBL
  ENSMUST00000178363 UniProtKB/TrEMBL
  ENSMUST00000179298 UniProtKB/TrEMBL
InterPro Glc_transpt_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_sugar_transport-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sugar/inositol_transpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sugar_transporter_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20528 UniProtKB/Swiss-Prot
Pfam Sugar_tr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc2a4 PhenoGen
PROSITE MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SUGAR_TRANSPORT_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SUGAR_TRANSPORT_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs TIGR00879 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GLUT4_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q3TPK6 UniProtKB/Swiss-Prot
  Q9JJN9 UniProtKB/Swiss-Prot