Myo1b (myosin IB) - Rat Genome Database

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Gene: Myo1b (myosin IB) Mus musculus
Analyze
Symbol: Myo1b
Name: myosin IB
RGD ID: 731319
MGI Page MGI
Description: Predicted to enable several functions, including actin filament binding activity; anion binding activity; and calmodulin binding activity. Acts upstream of or within transferrin transport. Located in brush border. Is expressed in central nervous system and sensory organ. Orthologous to human MYO1B (myosin IB); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AA406997; MIH-L; MMI-alpha; MMIa; molecular motor; myosin I alpha; Myosin IA (Myosin I alpha) (MMI-alpha) (MMIa) (MIH-L); myosin-1b; myosin-Ib; unconventional myosin-Ib
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39151,788,917 - 51,955,143 (-)NCBIGRCm39mm39
GRCm39 Ensembl151,788,924 - 51,955,230 (-)Ensembl
GRCm38151,749,758 - 51,916,063 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl151,749,765 - 51,916,071 (-)EnsemblGRCm38mm10GRCm38
MGSCv37151,806,609 - 51,972,818 (-)NCBIGRCm37mm9NCBIm37
MGSCv36151,694,310 - 51,860,497 (-)NCBImm8
Celera152,287,894 - 52,454,494 (-)NCBICelera
Cytogenetic Map1C1.1NCBI
cM Map126.58NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-hydroxypropanoic acid  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroperoxycyclophosphamide  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
ammonium chloride  (ISO)
aristolochic acid  (ISO)
Aroclor 1254  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
chloroprene  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
clofibric acid  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (EXP)
CU-O LINKAGE  (ISO)
cyclosporin A  (EXP,ISO)
cyproconazole  (EXP)
decabromodiphenyl ether  (ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
enzalutamide  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
gallic acid  (ISO)
gentamycin  (ISO)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
isobutanol  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
melphalan  (ISO)
mercury atom  (EXP,ISO)
mercury(0)  (EXP,ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
N,N-diethyl-m-toluamide  (ISO)
nickel atom  (ISO)
nimesulide  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (ISO)
oxycodone  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP,ISO)
perfluorooctanoic acid  (ISO)
permethrin  (ISO)
phytoestrogen  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
progesterone  (ISO)
propiconazole  (EXP)
Propiverine  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
retinyl acetate  (EXP)
sodium arsenite  (EXP,ISO)
sulforaphane  (EXP)
thapsigargin  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
trichostatin A  (ISO)
urethane  (EXP)
valdecoxib  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Additional References at PubMed
PMID:8449986   PMID:8458427   PMID:8863742   PMID:8884266   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932  
PMID:12490950   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693   PMID:21267068   PMID:21666684   PMID:21862448  
PMID:21873635   PMID:22114352   PMID:24457600   PMID:26370502   PMID:26371508   PMID:26514267   PMID:28378742   PMID:28634551   PMID:29472548   PMID:29518331   PMID:29588377   PMID:30457570  
PMID:31162944   PMID:32098917   PMID:32253237   PMID:32325033   PMID:33013468  


Genomics

Comparative Map Data
Myo1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39151,788,917 - 51,955,143 (-)NCBIGRCm39mm39
GRCm39 Ensembl151,788,924 - 51,955,230 (-)Ensembl
GRCm38151,749,758 - 51,916,063 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl151,749,765 - 51,916,071 (-)EnsemblGRCm38mm10GRCm38
MGSCv37151,806,609 - 51,972,818 (-)NCBIGRCm37mm9NCBIm37
MGSCv36151,694,310 - 51,860,497 (-)NCBImm8
Celera152,287,894 - 52,454,494 (-)NCBICelera
Cytogenetic Map1C1.1NCBI
cM Map126.58NCBI
MYO1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2191,245,185 - 191,425,389 (+)EnsemblGRCh38hg38GRCh38
GRCh382191,245,400 - 191,425,386 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372192,110,130 - 192,290,112 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362191,818,375 - 191,998,287 (+)NCBINCBI36hg18NCBI36
Build 342191,935,635 - 192,115,548NCBI
Celera2185,704,728 - 185,884,766 (+)NCBI
Cytogenetic Map2q32.3NCBI
HuRef2183,969,542 - 184,149,826 (+)NCBIHuRef
CHM1_12192,115,938 - 192,295,960 (+)NCBICHM1_1
Myo1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2949,690,043 - 49,852,373 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl949,690,086 - 49,850,798 (+)Ensembl
Rnor_6.0954,706,005 - 54,766,054 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl954,558,202 - 54,766,054 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0954,267,753 - 54,414,264 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4946,756,678 - 46,917,169 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1946,758,091 - 46,918,583 (+)NCBI
Celera947,338,666 - 47,497,975 (+)NCBICelera
Cytogenetic Map9q22NCBI
Myo1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554037,826,058 - 7,966,624 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554037,826,058 - 7,966,457 (-)NCBIChiLan1.0ChiLan1.0
MYO1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B196,465,078 - 196,644,188 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B196,465,078 - 196,644,188 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B78,549,494 - 78,728,819 (+)NCBIMhudiblu_PPA_v0panPan3
MYO1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1371,748,287 - 1,921,360 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl371,747,974 - 1,920,349 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha372,693,497 - 2,869,182 (+)NCBI
ROS_Cfam_1.0371,632,808 - 1,808,623 (+)NCBI
UMICH_Zoey_3.1371,642,176 - 1,819,468 (+)NCBI
UNSW_CanFamBas_1.0371,610,548 - 1,786,134 (+)NCBI
UU_Cfam_GSD_1.0371,638,672 - 1,814,273 (+)NCBI
Myo1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303149,833,909 - 150,005,201 (+)NCBI
SpeTri2.0NW_0049365066,832,132 - 7,004,262 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYO1B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1595,874,411 - 96,066,991 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11595,874,398 - 96,066,408 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215107,300,243 - 107,411,362 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYO1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11076,773,372 - 76,951,006 (+)NCBI
ChlSab1.1 Ensembl1076,773,042 - 76,951,235 (+)Ensembl
Vero_WHO_p1.0NW_023666040122,527,490 - 122,705,871 (-)NCBI
Myo1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248544,738,061 - 4,896,030 (-)NCBI

Position Markers
RH126810  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38151,778,942 - 51,779,151UniSTSGRCm38
MGSCv37151,835,786 - 51,835,995UniSTSGRCm37
Celera152,317,184 - 52,317,393UniSTS
Cytogenetic Map1C1.1UniSTS
RH129682  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38151,899,736 - 51,899,915UniSTSGRCm38
MGSCv37151,956,580 - 51,956,759UniSTSGRCm37
Celera152,438,230 - 52,438,409UniSTS
Cytogenetic Map1C1.1UniSTS
AW557864  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38151,899,695 - 51,899,790UniSTSGRCm38
GRCm389122,930,770 - 122,930,865UniSTSGRCm38
MGSCv37151,956,539 - 51,956,634UniSTSGRCm37
MGSCv379122,839,888 - 122,839,983UniSTSGRCm37
Celera9123,384,065 - 123,384,160UniSTS
Celera152,438,189 - 52,438,284UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map9F4UniSTS
cM Map972.0UniSTS
AF045565  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389122,930,847 - 122,930,980UniSTSGRCm38
GRCm38151,899,772 - 51,899,905UniSTSGRCm38
MGSCv37151,956,616 - 51,956,749UniSTSGRCm37
MGSCv379122,839,965 - 122,840,098UniSTSGRCm37
Celera9123,384,142 - 123,384,275UniSTS
Celera152,438,266 - 52,438,399UniSTS
Cytogenetic Map9F4UniSTS
Cytogenetic Map1C1.1UniSTS
cM Map972.0UniSTS
Whitehead/MRC_RH91220.95UniSTS
RH124549  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38151,750,084 - 51,750,308UniSTSGRCm38
MGSCv37151,806,928 - 51,807,152UniSTSGRCm37
Celera152,288,212 - 52,288,436UniSTS
Cytogenetic Map1C1.1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1301240Sluc15_msusceptibility to lung cancer 15 (mouse)Not determined11902627053026373Mouse
1301073Orch5_mautoimmune orchitis resistance 5 (mouse)Not determined11902627053026373Mouse
1301756Pgia1_mproteoglycan induced arthritis 1 (mouse)Not determined11902627053026373Mouse
12880407V125Dq2_mvitamin D active form serum level QTL 2 (mouse)11930000053300000Mouse
1357475w3q13_mweight 3 weeks QTL 13 (mouse)Not determined12307051073937756Mouse
4142433Hbnr1_mHeligmosomoides bakeri nematode resistance 1 (mouse)Not determined2551111058234112Mouse
11100001Col4a1m1_mcollagen, type IV, alpha 1 modifier 1 (mouse)12551111062907723Mouse
12880409V125Dq1_mvitamin D active form serum level QTL 1 (mouse)12600000060000000Mouse
1357822Lvrq3_mliver weight QTL 3 (mouse)Not determined13472105773937756Mouse
1357759W3q12_mweight 3 weeks QTL 12 (mouse)Not determined13472105773937756Mouse
1357651Lgq5_mlate growth QTL 5 (mouse)Not determined13472105773937756Mouse
1357506W10q6_mweight 10 weeks QTL 6 (mouse)Not determined13472105773937756Mouse
1357524W6q14_mweight 6 weeks QTL 14 (mouse)Not determined13472105773937756Mouse
1357824Estoq4_membryo survival total QTL 4 (mouse)Not determined13472105773937756Mouse
39128207Lwq16_mliver weight QTL 16 (mouse)13472105773937756Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134721057150318120Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134721057150318120Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134721057150318120Mouse
1301954Lrnx11_mlearning-contextual 11 (mouse)Not determined13909372774477206Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139093727126517573Mouse
12910780Pwgrq11_mpost-weaning growth rate QTL 11 (mouse)14082884867231097Mouse
12910786Pwgrq10_mpost-weaning growth rate QTL 10 (mouse)14082884867231097Mouse
12910788Pwgrq9_mpost-weaning growth rate QTL 9 (mouse)14082884867231097Mouse
1301166Thypr2_mthymocyte proliferative response 2 (mouse)Not determined14123396575234112Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14123624075236240Mouse
4141032Wbcc1_mwhite blood cell count 1 (mouse)Not determined4222050876220508Mouse
1301714Vertcling_mvertical clinging (mouse)Not determined14289887276899008Mouse
12879917Shm3_msperm head morphology 3 (mouse)14414774462907723Mouse
10412179Habiir1_mhyperoxic acute lung injury imprinted region 1 (mouse)Not determined14537861351924960Mouse
1558855Eae30_mexperimental allergic encephalomyelitis susceptibility 30 (mouse)Not determined14537861372935898Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
1301670Ssta1_msusceptibility to Salmonella typhimurium antigens 1 (mouse)Not determined14590759679907723Mouse
1301225Sle7_msystematic lupus erythematosus susceptibility 7 (mouse)Not determined14681553180815680Mouse
1301616Yaa2_mY-linked autoimmune acceleration 2 (mouse)Not determined14681553180815680Mouse
1558905Gct7_mgranulosa cell tumorigenesis 7 (mouse)Not determined14731073581310854Mouse
1558822Vas1_mautoimmune vasitis resistance 1 (mouse)Not determined14884984782850051Mouse
1301211Bbaa11_mB.burgdorferi-associated arthritis 11 (mouse)Not determined14884984782850051Mouse
1301430Cdcs2_mcytokine deficiency colitis susceptibility 2 (mouse)Not determined14885318682853326Mouse
10043965Obq24_mobesity QTL 24 (mouse)Not determined15085105784851057Mouse
4141305Tgq9_mtriglyceride QTL 9 (mouse)Not determined5138244685382446Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2724
Count of miRNA genes:748
Interacting mature miRNAs:972
Transcripts:ENSMUST00000018561, ENSMUST00000046390, ENSMUST00000114537, ENSMUST00000114541, ENSMUST00000123299, ENSMUST00000126657, ENSMUST00000126952, ENSMUST00000135125, ENSMUST00000136273, ENSMUST00000136701, ENSMUST00000140731, ENSMUST00000140930, ENSMUST00000144694, ENSMUST00000145367, ENSMUST00000151525
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001161817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC108840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC123555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC138680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF426463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB768105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE950809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY759345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA463624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ046000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L00923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LXEJ02005469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000018561   ⟹   ENSMUSP00000018561
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,789,153 - 51,955,087 (-)Ensembl
GRCm38.p6 Ensembl151,749,994 - 51,915,928 (-)Ensembl
RefSeq Acc Id: ENSMUST00000046390   ⟹   ENSMUSP00000040447
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,788,924 - 51,955,230 (-)Ensembl
GRCm38.p6 Ensembl151,749,765 - 51,916,071 (-)Ensembl
RefSeq Acc Id: ENSMUST00000114537   ⟹   ENSMUSP00000110184
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,789,141 - 51,955,100 (-)Ensembl
GRCm38.p6 Ensembl151,749,982 - 51,915,941 (-)Ensembl
RefSeq Acc Id: ENSMUST00000114541   ⟹   ENSMUSP00000110188
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,789,148 - 51,946,475 (-)Ensembl
GRCm38.p6 Ensembl151,749,989 - 51,907,316 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123299
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,873,623 - 51,890,265 (-)Ensembl
GRCm38.p6 Ensembl151,834,464 - 51,851,106 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126657
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,901,804 - 51,955,080 (-)Ensembl
GRCm38.p6 Ensembl151,862,645 - 51,915,921 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126952
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,818,874 - 51,821,363 (-)Ensembl
GRCm38.p6 Ensembl151,779,715 - 51,782,204 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135125
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,838,695 - 51,859,705 (-)Ensembl
GRCm38.p6 Ensembl151,799,536 - 51,820,546 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136273
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,806,035 - 51,815,595 (-)Ensembl
GRCm38.p6 Ensembl151,766,876 - 51,776,436 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136701
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,815,552 - 51,834,384 (-)Ensembl
GRCm38.p6 Ensembl151,776,393 - 51,795,225 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140731
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,801,681 - 51,810,038 (-)Ensembl
GRCm38.p6 Ensembl151,762,522 - 51,770,879 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140930
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,801,749 - 51,806,551 (-)Ensembl
GRCm38.p6 Ensembl151,762,590 - 51,767,392 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144694   ⟹   ENSMUSP00000114603
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,836,562 - 51,935,460 (-)Ensembl
GRCm38.p6 Ensembl151,797,403 - 51,896,301 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145367
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,799,512 - 51,803,629 (-)Ensembl
GRCm38.p6 Ensembl151,760,353 - 51,764,470 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151525
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl151,849,840 - 51,955,071 (-)Ensembl
GRCm38.p6 Ensembl151,810,681 - 51,915,912 (-)Ensembl
RefSeq Acc Id: NM_001161817   ⟹   NP_001155289
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,788,917 - 51,955,137 (-)NCBI
GRCm38151,749,758 - 51,915,978 (-)NCBI
MGSCv37151,806,609 - 51,972,818 (-)RGD
Celera152,287,887 - 52,454,498 (-)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001290982   ⟹   NP_001277911
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,788,917 - 51,955,137 (-)NCBI
GRCm38151,749,758 - 51,915,978 (-)NCBI
Celera152,287,887 - 52,454,498 (-)NCBI
Sequence:
RefSeq Acc Id: NM_010863   ⟹   NP_034993
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,788,917 - 51,955,137 (-)NCBI
GRCm38151,749,758 - 51,915,978 (-)NCBI
MGSCv37151,806,609 - 51,972,818 (-)RGD
Celera152,287,887 - 52,454,498 (-)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006495764   ⟹   XP_006495827
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,789,148 - 51,955,143 (-)NCBI
GRCm38151,749,989 - 51,916,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495765   ⟹   XP_006495828
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,789,033 - 51,935,995 (-)NCBI
GRCm38151,749,874 - 51,896,855 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495766   ⟹   XP_006495829
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,789,148 - 51,955,143 (-)NCBI
GRCm38151,749,989 - 51,916,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495767   ⟹   XP_006495830
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,789,148 - 51,955,143 (-)NCBI
GRCm38151,749,989 - 51,916,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495769   ⟹   XP_006495832
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,789,033 - 51,918,762 (-)NCBI
GRCm38151,749,874 - 51,879,603 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319213   ⟹   XP_017174702
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,789,033 - 51,918,762 (-)NCBI
GRCm38151,749,874 - 51,879,603 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252028   ⟹   XP_030107888
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,789,033 - 51,935,994 (-)NCBI
GRCm38151,749,874 - 51,896,854 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162635   ⟹   XP_036018528
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39151,789,033 - 51,918,762 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_034993   ⟸   NM_010863
- Peptide Label: isoform 2
- UniProtKB: P46735 (UniProtKB/Swiss-Prot),   Q7TQD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001155289   ⟸   NM_001161817
- Peptide Label: isoform 1
- UniProtKB: Q7TQD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495828   ⟸   XM_006495765
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006495832   ⟸   XM_006495769
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006495830   ⟸   XM_006495767
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006495829   ⟸   XM_006495766
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006495827   ⟸   XM_006495764
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001277911   ⟸   NM_001290982
- Peptide Label: isoform 3
- UniProtKB: E9QNH6 (UniProtKB/TrEMBL),   Q3TTZ3 (UniProtKB/TrEMBL),   Q7TQD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017174702   ⟸   XM_017319213
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_030107888   ⟸   XM_030252028
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000040447   ⟸   ENSMUST00000046390
RefSeq Acc Id: ENSMUSP00000114603   ⟸   ENSMUST00000144694
RefSeq Acc Id: ENSMUSP00000110184   ⟸   ENSMUST00000114537
RefSeq Acc Id: ENSMUSP00000110188   ⟸   ENSMUST00000114541
RefSeq Acc Id: ENSMUSP00000018561   ⟸   ENSMUST00000018561
RefSeq Acc Id: XP_036018528   ⟸   XM_036162635
- Peptide Label: isoform X6
Protein Domains
IQ   Myosin motor   TH1

Promoters
RGD ID:6818138
Promoter ID:MM_KWN:680
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000039709
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,824,891 - 51,825,391 (-)MPROMDB
RGD ID:6818137
Promoter ID:MM_KWN:681
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Lung
Transcripts:OTTMUST00000039708
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,827,441 - 51,828,092 (-)MPROMDB
RGD ID:6818139
Promoter ID:MM_KWN:682
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000041662
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,833,741 - 51,834,241 (-)MPROMDB
RGD ID:6818136
Promoter ID:MM_KWN:683
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Lung
Transcripts:OTTMUST00000039707
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,838,774 - 51,839,274 (-)MPROMDB
RGD ID:6818135
Promoter ID:MM_KWN:684
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Lung
Transcripts:OTTMUST00000039706
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,852,149 - 51,852,649 (-)MPROMDB
RGD ID:6818132
Promoter ID:MM_KWN:685
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Lung
Transcripts:OTTMUST00000039705
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,877,639 - 51,878,139 (-)MPROMDB
RGD ID:6818141
Promoter ID:MM_KWN:686
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000041663
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,908,541 - 51,909,041 (-)MPROMDB
RGD ID:6873662
Promoter ID:EPDNEW_M282
Type:initiation region
Name:Myo1b_1
Description:Mus musculus myosin IB , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38151,915,948 - 51,916,008EPDNEW
RGD ID:6846625
Promoter ID:MM_ACW:787
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:MYO1B.FSEP07,   MYO1B.TSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,936,269 - 51,936,769 (-)MPROMDB
RGD ID:6818131
Promoter ID:MM_KWN:687
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Lung
Transcripts:OTTMUST00000039704
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,952,899 - 51,953,399 (-)MPROMDB
RGD ID:6818133
Promoter ID:MM_KWN:689
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   BoneMarrow_2Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:ENSMUST00000018561,   ENSMUST00000114537,   OTTMUST00000039699,   UC007AXT.1,   UC007AXU.1,   UC007AXV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36151,972,421 - 51,972,921 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107752 AgrOrtholog
Ensembl Genes ENSMUSG00000018417 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000018561 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000040447 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000110184 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000110188 UniProtKB/TrEMBL
  ENSMUSP00000114603 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000018561 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000046390 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000114537 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000114541 UniProtKB/TrEMBL
  ENSMUST00000144694 UniProtKB/TrEMBL
Gene3D-CATH 3.40.850.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro IQ_motif_EF-hand-BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_head_motor_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_TH1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYSc_Myo1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:17912 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:107752 ENTREZGENE
NCBI Gene 17912 ENTREZGENE
Pfam Myosin_head UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Myosin_TH1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00612 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Myo1b PhenoGen
PRINTS MYOSINHEAVY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE MYOSIN_MOTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50096 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TH1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART MYSc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00015 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YV80_MOUSE UniProtKB/TrEMBL
  E9Q580_MOUSE UniProtKB/TrEMBL
  E9QNH6 ENTREZGENE, UniProtKB/TrEMBL
  MYO1B_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TEP4_MOUSE UniProtKB/TrEMBL
  Q3TTZ3 ENTREZGENE, UniProtKB/TrEMBL
  Q3UEQ4_MOUSE UniProtKB/TrEMBL
  Q7TQD7 ENTREZGENE, UniProtKB/TrEMBL
  Q91ZI6_MOUSE UniProtKB/TrEMBL
UniProt Secondary P70244 UniProtKB/Swiss-Prot
  Q80VD8 UniProtKB/Swiss-Prot