CSF1 (colony stimulating factor 1) - Rat Genome Database

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Gene: CSF1 (colony stimulating factor 1) Homo sapiens
Analyze
Symbol: CSF1
Name: colony stimulating factor 1
RGD ID: 731066
HGNC Page HGNC
Description: Exhibits cytokine activity; growth factor activity; and protein homodimerization activity. Involved in several processes, including positive regulation of cell differentiation; positive regulation of macromolecule metabolic process; and positive regulation of macrophage migration. Localizes to several cellular components, including extracellular space; nuclear body; and perinuclear region of cytoplasm. Implicated in interstitial cystitis. Biomarker of several diseases, including COVID-19; atherosclerosis; end stage renal disease; glomerulonephritis (multiple); and vesicoureteral reflux.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: colony stimulating factor 1 (macrophage); CSF-1; lanimostim; macrophage colony stimulating factor; macrophage colony stimulating factor 1; macrophage colony-stimulating factor 1; MCSF; MGC31930
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1109,910,242 - 109,930,992 (+)EnsemblGRCh38hg38GRCh38
GRCh381109,910,506 - 109,930,992 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371110,453,471 - 110,473,614 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361110,254,980 - 110,273,878 (+)NCBINCBI36hg18NCBI36
Build 341110,165,498 - 110,184,397NCBI
Celera1108,699,836 - 108,719,046 (+)NCBI
Cytogenetic Map1p13.3NCBI
HuRef1108,322,980 - 108,343,084 (+)NCBIHuRef
CHM1_11110,568,036 - 110,588,399 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-amphetamine  (ISO)
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-octadec-9-enoylglycero-3-phosphate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-tert-butylhydroquinone  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
5-azacytidine  (ISO)
5-fluorouracil  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B2  (EXP)
aldehydo-D-glucosamine  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
aripiprazole  (EXP)
aristolochic acid  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
asbestos  (EXP)
aspartame  (ISO)
atazanavir sulfate  (EXP)
benzalkonium chloride  (ISO)
benzamide  (ISO)
benzene  (EXP,ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (ISO)
benzoates  (EXP)
beta-D-glucosamine  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
calcitriol  (EXP)
carbon nanotube  (ISO)
chenodeoxycholic acid  (EXP)
cholesterol  (EXP)
choline  (ISO)
cisplatin  (ISO)
cobalt dichloride  (EXP)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (EXP)
crocidolite asbestos  (ISO)
crotonaldehyde  (EXP)
curcumin  (EXP)
cycloheximide  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (EXP,ISO)
DAPT  (ISO)
deoxycholic acid  (EXP)
dexamethasone  (ISO)
dextran sulfate  (ISO)
dibenz[a,h]anthracene  (ISO)
diclofenac  (ISO)
dioxygen  (ISO)
dorsomorphin  (EXP)
elemental selenium  (EXP)
endosulfan  (ISO)
enzyme inhibitor  (EXP,ISO)
ethanol  (EXP)
ethyl methanesulfonate  (EXP)
fenamidone  (ISO)
fenvalerate  (ISO)
finasteride  (ISO)
flutamide  (ISO)
folic acid  (EXP,ISO)
formaldehyde  (EXP)
fulvestrant  (EXP)
genistein  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
glycochenodeoxycholic acid  (EXP)
glycocholic acid  (EXP)
glycodeoxycholic acid  (EXP)
graphite  (ISO)
GTP  (ISO)
GW 4064  (EXP)
histamine  (ISO)
leflunomide  (EXP)
lipopolysaccharide  (EXP,ISO)
LY294002  (ISO)
methamphetamine  (ISO)
methotrexate  (EXP)
methyl methanesulfonate  (EXP)
monosodium L-glutamate  (ISO)
N-nitrosodimethylamine  (ISO)
nefazodone  (EXP,ISO)
nickel atom  (EXP)
nickel dichloride  (EXP)
niclosamide  (ISO)
nitric oxide  (EXP,ISO)
o-anisidine  (EXP)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
pentachlorophenol  (ISO)
phenylmercury acetate  (EXP)
pirinixic acid  (ISO)
raloxifene  (EXP)
resveratrol  (EXP,ISO)
Risedronate sodium  (ISO)
rotenone  (ISO)
SB 431542  (EXP)
selenium atom  (EXP)
Shikonin  (ISO)
silicon dioxide  (EXP,ISO)
sirolimus  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
succimer  (ISO)
sulindac  (ISO)
T-2 toxin  (ISO)
tacrolimus hydrate  (ISO)
tamoxifen  (ISO)
tert-butyl hydroperoxide  (EXP)
testosterone  (EXP)
tetracycline  (ISO)
thymidine  (EXP)
titanium dioxide  (ISO)
topotecan  (ISO)
triadimefon  (EXP)
trichloroethene  (ISO)
triclosan  (EXP)
triptonide  (ISO)
troglitazone  (ISO)
urethane  (EXP)
zinc atom  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)
zoledronic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
branching involved in mammary gland duct morphogenesis  (IEA,ISO)
cell population proliferation  (ISO)
cellular protein metabolic process  (TAS)
cytokine-mediated signaling pathway  (TAS)
developmental process involved in reproduction  (ISS)
homeostasis of number of cells within a tissue  (IEA,ISO)
inflammatory response  (IEA)
innate immune response  (IEA)
macrophage colony-stimulating factor signaling pathway  (IEA)
macrophage differentiation  (ISO,TAS)
mammary duct terminal end bud growth  (IEA,ISO)
mammary gland fat development  (IEA,ISO)
microglial cell proliferation  (IEA)
monocyte activation  (NAS)
negative regulation of neuron death  (IDA)
odontogenesis  (ISO)
ossification  (ISO)
osteoclast differentiation  (IBA,IDA,ISO)
osteoclast proliferation  (IEA,ISO)
positive regulation of cell migration  (ISO,ISS)
positive regulation of cell population proliferation  (IDA,TAS)
positive regulation of cell-matrix adhesion  (ISO,ISS)
positive regulation of cellular protein metabolic process  (IDA)
positive regulation of gene expression  (IDA)
positive regulation of macrophage chemotaxis  (IDA)
positive regulation of macrophage colony-stimulating factor signaling pathway  (IDA)
positive regulation of macrophage derived foam cell differentiation  (IDA)
positive regulation of macrophage differentiation  (IBA,IDA,ISO)
positive regulation of macrophage migration  (IMP)
positive regulation of microglial cell migration  (IDA)
positive regulation of monocyte differentiation  (ISO,ISS)
positive regulation of mononuclear cell proliferation  (IDA)
positive regulation of multicellular organism growth  (IEA,ISO)
positive regulation of odontogenesis of dentin-containing tooth  (IEA,ISO)
positive regulation of osteoclast differentiation  (IDA,ISO)
positive regulation of protein kinase activity  (ISO,ISS)
positive regulation of Ras protein signal transduction  (IEA,ISO)
post-translational protein modification  (TAS)
regulation of macrophage derived foam cell differentiation  (NAS)
regulation of ossification  (IEA,ISO)
response to ischemia  (IDA)
signal transduction  (IEA)
transmembrane receptor protein tyrosine kinase signaling pathway  (IDA)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
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3. Fraser DD, etal., Crit Care Explor. 2020 Jun 22;2(6):e0144. doi: 10.1097/CCE.0000000000000144. eCollection 2020 Jun.
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5. Isbel NM, etal., Nephrol Dial Transplant. 2001 Aug;16(8):1638-47.
6. Iyoda M, etal., Kidney Int. 2009 May;75(10):1060-70. doi: 10.1038/ki.2009.43. Epub 2009 Feb 25.
7. Jang MH, etal., J Immunol. 2006 Sep 15;177(6):4055-63.
8. Jeffes EW, etal., J Immunol. 2005 Mar 1;174(5):2533-43.
9. Jin Y, etal., Lab Invest. 2013 Jul;93(7):801-11. doi: 10.1038/labinvest.2013.64. Epub 2013 Apr 29.
10. Juniantito V, etal., Vet Pathol. 2013 Jan;50(1):76-85. doi: 10.1177/0300985812450718. Epub 2012 Jun 13.
11. Kirma N, etal., Cancer Res. 2004 Jun 15;64(12):4162-70.
12. Le Meur Y, etal., Transplantation. 2002 Apr 27;73(8):1318-24.
13. Lenda DM, etal., J Immunol. 2004 Oct 1;173(7):4744-54.
14. Menke J, etal., Cancer Res. 2012 Jan 1;72(1):187-200. doi: 10.1158/0008-5472.CAN-11-1232. Epub 2011 Nov 3.
15. Menke J, etal., J Am Soc Nephrol. 2011 Oct;22(10):1821-33. doi: 10.1681/ASN.2011010038. Epub 2011 Sep 1.
16. Menke J, etal., J Immunol. 2008 Nov 15;181(10):7367-79.
17. Miyazaki K, etal., Clin Exp Immunol. 1997 May;108(2):318-23.
18. Paulus P, etal., Cancer Res. 2006 Apr 15;66(8):4349-56.
19. Pipeline to import KEGG annotations from KEGG into RGD
20. Rajavashisth T, etal., J Clin Invest 1998 Jun 15;101(12):2702-10.
21. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
22. RGD automated import pipeline for gene-chemical interactions
23. Richardsen E, etal., Histopathology. 2008 May 28;.
24. Rolle U, etal., Kidney Int. 2002 Aug;62(2):507-13.
25. Rysava R, etal., Cas Lek Cesk. 2002 Apr 26;141(8):244-7.
26. Saionji K and Ohsaka A, Acta Haematol. 2001;105(1):21-6.
27. Singh KA, etal., Transpl Int. 2009 Jul;22(7):730-7. doi: 10.1111/j.1432-2277.2009.00840.x. Epub 2009 Jan 29.
28. Tamimi RM, etal., Cancer Res. 2008 Jan 1;68(1):18-21.
29. Tian S, etal., Inflamm Res. 2007 Jul;56(7):304-10.
30. Utsunomiya K, etal., J Diabetes Complications. 1995 Oct-Dec;9(4):292-5.
31. Van Wesenbeeck L, etal., Proc Natl Acad Sci U S A 2002 Oct 29;99(22):14303-8.
32. Yamamoto S, etal., J Neurochem. 2010 Nov;115(4):1057-67. doi: 10.1111/j.1471-4159.2010.06996.x. Epub 2010 Oct 12.
33. Yang Y, etal., J Allergy Clin Immunol. 2020 Apr 29. pii: S0091-6749(20)30576-5. doi: 10.1016/j.jaci.2020.04.027.
34. Zhang MZ, etal., J Clin Invest. 2012 Dec 3;122(12):4519-32. doi: 10.1172/JCI60363. Epub 2012 Nov 12.
Additional References at PubMed
PMID:1455231   PMID:1531650   PMID:1540160   PMID:1571567   PMID:1733926   PMID:1739124   PMID:1791839   PMID:2145044   PMID:2408759   PMID:2460758   PMID:2660794   PMID:2996129  
PMID:3039346   PMID:3259875   PMID:3264877   PMID:3264878   PMID:3493529   PMID:3498652   PMID:3500041   PMID:7696959   PMID:8086034   PMID:8262907   PMID:8336080   PMID:8355686  
PMID:8422357   PMID:8804363   PMID:8922060   PMID:8981357   PMID:9131001   PMID:9147389   PMID:9632647   PMID:10652277   PMID:10666185   PMID:10857771   PMID:11248655   PMID:11297560  
PMID:11369790   PMID:11387343   PMID:11739737   PMID:11792569   PMID:11843897   PMID:12032835   PMID:12372416   PMID:12393446   PMID:12411027   PMID:12456016   PMID:12477932   PMID:12501178  
PMID:12548211   PMID:12684699   PMID:12749918   PMID:12790839   PMID:12865350   PMID:12890905   PMID:12894871   PMID:12928417   PMID:12929928   PMID:14605992   PMID:14634568   PMID:14654075  
PMID:15001836   PMID:15116247   PMID:15256272   PMID:15261158   PMID:15304486   PMID:15358207   PMID:15489334   PMID:15494511   PMID:15576295   PMID:15624698   PMID:15640942   PMID:15728521  
PMID:15780937   PMID:15820145   PMID:15866728   PMID:15919699   PMID:15944252   PMID:16204228   PMID:16267391   PMID:16318581   PMID:16320327   PMID:16344560   PMID:16407111   PMID:16673212  
PMID:16844084   PMID:16859503   PMID:17108334   PMID:17192722   PMID:17243911   PMID:17244792   PMID:17353186   PMID:17355643   PMID:17368603   PMID:17420255   PMID:17431224   PMID:17443671  
PMID:17516513   PMID:17532041   PMID:17589498   PMID:17907802   PMID:17916748   PMID:17918257   PMID:17922812   PMID:17967422   PMID:18219369   PMID:18322228   PMID:18435789   PMID:18467591  
PMID:18566389   PMID:18606301   PMID:18619508   PMID:18632616   PMID:18668547   PMID:18676750   PMID:18708368   PMID:18718581   PMID:18724005   PMID:18751872   PMID:18852899   PMID:18996518  
PMID:19004987   PMID:19008293   PMID:19017797   PMID:19100238   PMID:19432671   PMID:19443701   PMID:19453261   PMID:19561083   PMID:19641137   PMID:19711348   PMID:19913121   PMID:19926892  
PMID:19950360   PMID:20237496   PMID:20436471   PMID:20452482   PMID:20455868   PMID:20485444   PMID:20504948   PMID:20628086   PMID:20628624   PMID:20673868   PMID:20839008   PMID:20839921  
PMID:20869948   PMID:20925194   PMID:21239715   PMID:21481374   PMID:21623375   PMID:21717212   PMID:21791433   PMID:21854753   PMID:21873635   PMID:21895511   PMID:21938481   PMID:21945122  
PMID:22028782   PMID:22082370   PMID:22153499   PMID:22186992   PMID:22483114   PMID:22678116   PMID:22826234   PMID:22902366   PMID:23061794   PMID:23233531   PMID:23251661   PMID:23260168  
PMID:23285029   PMID:23333304   PMID:23376485   PMID:23471483   PMID:23520016   PMID:23684409   PMID:23688065   PMID:23834954   PMID:23870818   PMID:23924854   PMID:24016870   PMID:24157873  
PMID:24178511   PMID:24415783   PMID:24592910   PMID:24604026   PMID:24748497   PMID:24769444   PMID:24956020   PMID:25066464   PMID:25138985   PMID:25196912   PMID:25313137   PMID:25416956  
PMID:25418473   PMID:25420919   PMID:25721620   PMID:25854167   PMID:25891874   PMID:25935153   PMID:26029847   PMID:26095744   PMID:26235028   PMID:26245897   PMID:26359491   PMID:26376111  
PMID:26439863   PMID:26642091   PMID:26686751   PMID:27013192   PMID:27038418   PMID:27107415   PMID:27173404   PMID:27445439   PMID:27599777   PMID:28131007   PMID:28273887   PMID:28655719  
PMID:28656272   PMID:28687620   PMID:28779164   PMID:28875266   PMID:29117863   PMID:29323162   PMID:29363207   PMID:29422647   PMID:29507755   PMID:29734839   PMID:29767252   PMID:29801457  
PMID:29991678   PMID:30012324   PMID:30052166   PMID:30317027   PMID:30342176   PMID:30580386   PMID:30592292   PMID:30816518   PMID:31028249   PMID:31035945   PMID:31107544   PMID:31217507  
PMID:31469468   PMID:31536655   PMID:31911555   PMID:31994318   PMID:32149159   PMID:32178869   PMID:32264887   PMID:32296183   PMID:32356483   PMID:32487125   PMID:33652607  


Genomics

Comparative Map Data
CSF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1109,910,242 - 109,930,992 (+)EnsemblGRCh38hg38GRCh38
GRCh381109,910,506 - 109,930,992 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371110,453,471 - 110,473,614 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361110,254,980 - 110,273,878 (+)NCBINCBI36hg18NCBI36
Build 341110,165,498 - 110,184,397NCBI
Celera1108,699,836 - 108,719,046 (+)NCBI
Cytogenetic Map1p13.3NCBI
HuRef1108,322,980 - 108,343,084 (+)NCBIHuRef
CHM1_11110,568,036 - 110,588,399 (+)NCBICHM1_1
Csf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393107,648,364 - 107,668,048 (-)NCBIGRCm39mm39
GRCm39 Ensembl3107,648,364 - 107,667,785 (-)Ensembl
GRCm383107,741,048 - 107,760,469 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3107,741,048 - 107,760,469 (-)EnsemblGRCm38mm10GRCm38
MGSCv373107,543,966 - 107,563,387 (-)NCBIGRCm37mm9NCBIm37
MGSCv363107,869,116 - 107,888,525 (-)NCBImm8
Celera3110,073,392 - 110,092,813 (-)NCBICelera
Cytogenetic Map3F2.3NCBI
cM Map346.83NCBI
Csf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22195,377,215 - 195,396,608 (-)NCBI
Rnor_6.0 Ensembl2210,522,375 - 210,550,560 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.02210,522,370 - 210,550,546 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02229,989,430 - 230,017,945 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42203,292,765 - 203,307,968 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12203,255,518 - 203,270,701 (-)NCBI
Celera2188,024,644 - 188,043,645 (-)NCBICelera
Cytogenetic Map2q34NCBI
Csf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543513,404,508 - 13,424,247 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543513,404,236 - 13,423,059 (+)NCBIChiLan1.0ChiLan1.0
CSF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11127,764,916 - 127,864,188 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1127,764,916 - 127,781,943 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01112,555,755 - 112,575,894 (+)NCBIMhudiblu_PPA_v0panPan3
CSF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1642,028,454 - 42,047,028 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl642,034,149 - 42,049,371 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha644,804,295 - 44,823,439 (-)NCBI
ROS_Cfam_1.0642,360,013 - 42,379,162 (-)NCBI
UMICH_Zoey_3.1642,092,785 - 42,111,910 (-)NCBI
UNSW_CanFamBas_1.0642,050,361 - 42,070,486 (-)NCBI
UU_Cfam_GSD_1.0642,485,555 - 42,505,704 (-)NCBI
Csf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505818,720,989 - 18,742,009 (-)NCBI
SpeTri2.0NW_0049367041,372,137 - 1,393,355 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CSF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4110,178,478 - 110,197,901 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14110,178,466 - 110,198,232 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24120,592,959 - 120,605,764 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CSF1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12023,615,107 - 23,635,399 (-)NCBI
Vero_WHO_p1.0NW_02366603834,824,127 - 34,844,440 (+)NCBI
Csf1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247725,663,374 - 5,705,965 (+)NCBI

Position Markers
D1S3360  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371110,473,338 - 110,473,447UniSTSGRCh37
Build 361110,274,861 - 110,274,970RGDNCBI36
Celera1108,720,029 - 108,720,138RGD
Cytogenetic Map1p13.3UniSTS
HuRef1108,342,806 - 108,342,915UniSTS
Whitehead-YAC Contig Map1 UniSTS
SHGC-75281  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371110,471,508 - 110,471,649UniSTSGRCh37
Build 361110,273,031 - 110,273,172RGDNCBI36
Celera1108,718,199 - 108,718,340RGD
Cytogenetic Map1p13.3UniSTS
HuRef1108,340,976 - 108,341,117UniSTS
TNG Radiation Hybrid Map160015.0UniSTS
GeneMap99-GB4 RH Map1339.02UniSTS
GDB:624800  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p13.3UniSTS
GDB:624803  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p13.3UniSTS

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR130Bhsa-miR-130b-3pMirtarbaseexternal_infoELISA//Luciferase reporter assay//qRT-PCRFunctional MTI22005523
MIR130Bhsa-miR-130b-3pOncomiRDBexternal_infoNANA22005523
MIR130Ahsa-miR-130a-3pMirtarbaseexternal_infoLuciferase reporter assay//Reporter assayFunctional MTI14697198
MIR130Ahsa-miR-130a-3pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI18823650
MIR130Ahsa-miR-130a-5pMirecordsexternal_infoNANA14697198
MIR130Ahsa-miR-130a-5pMirecordsexternal_infoNANA18823650

Predicted Target Of
Summary Value
Count of predictions:4137
Count of miRNA genes:1126
Interacting mature miRNAs:1433
Transcripts:ENST00000329608, ENST00000344188, ENST00000357302, ENST00000369801, ENST00000369802, ENST00000420111, ENST00000488198, ENST00000525659, ENST00000526001, ENST00000527192
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 1 1
Medium 2205 1917 1246 332 956 189 3286 1205 1544 271 1019 1450 154 1204 2049 1
Low 199 1053 477 292 861 276 1069 989 2171 148 436 135 20 1 739 3 2
Below cutoff 30 19 1 100 1 3 14 3 24 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_030008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_000757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017000369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB208952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH005300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI758702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK300401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL450468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS166282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS166284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS166286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA414355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB287787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HG005314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI519552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI638410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI638412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI638414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JA312075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JA312077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JA312079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF803735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC461699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M27087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M37435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M64592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M76453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U22386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X05825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X06106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000329608   ⟹   ENSP00000327513
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,910,849 - 109,930,992 (+)Ensembl
RefSeq Acc Id: ENST00000357302   ⟹   ENSP00000349854
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,910,605 - 109,917,425 (+)Ensembl
RefSeq Acc Id: ENST00000369801   ⟹   ENSP00000358816
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,910,986 - 109,925,198 (+)Ensembl
RefSeq Acc Id: ENST00000369802   ⟹   ENSP00000358817
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,910,899 - 109,926,743 (+)Ensembl
RefSeq Acc Id: ENST00000420111   ⟹   ENSP00000407317
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,910,908 - 109,929,034 (+)Ensembl
RefSeq Acc Id: ENST00000488198   ⟹   ENSP00000433837
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,910,870 - 109,923,599 (+)Ensembl
RefSeq Acc Id: ENST00000525659   ⟹   ENSP00000431547
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,910,506 - 109,921,913 (+)Ensembl
RefSeq Acc Id: ENST00000526001
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,915,657 - 109,922,549 (+)Ensembl
RefSeq Acc Id: ENST00000527192   ⟹   ENSP00000434527
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1109,910,242 - 109,921,880 (+)Ensembl
RefSeq Acc Id: NM_000757   ⟹   NP_000748
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381109,910,849 - 109,930,992 (+)NCBI
GRCh371110,453,233 - 110,473,616 (+)NCBI
Build 361110,254,980 - 110,273,878 (+)NCBI Archive
HuRef1108,322,980 - 108,343,084 (+)NCBI
CHM1_11110,568,036 - 110,588,399 (+)NCBI
Sequence:
RefSeq Acc Id: NM_172210   ⟹   NP_757349
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381109,910,849 - 109,925,202 (+)NCBI
GRCh371110,453,233 - 110,473,616 (+)NCBI
Build 361110,254,980 - 110,269,347 (+)NCBI Archive
HuRef1108,322,980 - 108,343,084 (+)NCBI
CHM1_11110,568,036 - 110,582,607 (+)NCBI
Sequence:
RefSeq Acc Id: NM_172211   ⟹   NP_757350
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381109,910,849 - 109,930,992 (+)NCBI
GRCh371110,453,233 - 110,473,616 (+)NCBI
Build 361110,254,980 - 110,273,878 (+)NCBI Archive
HuRef1108,322,980 - 108,343,084 (+)NCBI
CHM1_11110,568,036 - 110,588,399 (+)NCBI
Sequence:
RefSeq Acc Id: NM_172212   ⟹   NP_757351
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381109,910,849 - 109,926,744 (+)NCBI
GRCh371110,453,233 - 110,473,616 (+)NCBI
Build 361110,254,980 - 110,270,888 (+)NCBI Archive
HuRef1108,322,980 - 108,343,084 (+)NCBI
CHM1_11110,568,036 - 110,584,148 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017000369   ⟹   XP_016855858
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381109,910,506 - 109,930,992 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_000748 (Get FASTA)   NCBI Sequence Viewer  
  NP_757349 (Get FASTA)   NCBI Sequence Viewer  
  NP_757350 (Get FASTA)   NCBI Sequence Viewer  
  NP_757351 (Get FASTA)   NCBI Sequence Viewer  
  XP_016855858 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA52117 (Get FASTA)   NCBI Sequence Viewer  
  AAA52120 (Get FASTA)   NCBI Sequence Viewer  
  AAA59572 (Get FASTA)   NCBI Sequence Viewer  
  AAA59573 (Get FASTA)   NCBI Sequence Viewer  
  AAA64849 (Get FASTA)   NCBI Sequence Viewer  
  AAB59527 (Get FASTA)   NCBI Sequence Viewer  
  AAH21117 (Get FASTA)   NCBI Sequence Viewer  
  AEF12310 (Get FASTA)   NCBI Sequence Viewer  
  BAD92189 (Get FASTA)   NCBI Sequence Viewer  
  BAF84349 (Get FASTA)   NCBI Sequence Viewer  
  BAG62132 (Get FASTA)   NCBI Sequence Viewer  
  CAA29265 (Get FASTA)   NCBI Sequence Viewer  
  CAA29479 (Get FASTA)   NCBI Sequence Viewer  
  CAJ32234 (Get FASTA)   NCBI Sequence Viewer  
  CAJ32235 (Get FASTA)   NCBI Sequence Viewer  
  CAJ32236 (Get FASTA)   NCBI Sequence Viewer  
  CBX54357 (Get FASTA)   NCBI Sequence Viewer  
  CBX55878 (Get FASTA)   NCBI Sequence Viewer  
  CBX55879 (Get FASTA)   NCBI Sequence Viewer  
  CBX55880 (Get FASTA)   NCBI Sequence Viewer  
  CCA65433 (Get FASTA)   NCBI Sequence Viewer  
  CCA65434 (Get FASTA)   NCBI Sequence Viewer  
  CCA65435 (Get FASTA)   NCBI Sequence Viewer  
  EAW56416 (Get FASTA)   NCBI Sequence Viewer  
  EAW56417 (Get FASTA)   NCBI Sequence Viewer  
  EAW56418 (Get FASTA)   NCBI Sequence Viewer  
  EAW56419 (Get FASTA)   NCBI Sequence Viewer  
  EAW56420 (Get FASTA)   NCBI Sequence Viewer  
  EAW56421 (Get FASTA)   NCBI Sequence Viewer  
  P09603 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_000748   ⟸   NM_000757
- Peptide Label: isoform a precursor
- Sequence:
RefSeq Acc Id: NP_757350   ⟸   NM_172211
- Peptide Label: isoform c precursor
- Sequence:
RefSeq Acc Id: NP_757351   ⟸   NM_172212
- Peptide Label: isoform a precursor
- Sequence:
RefSeq Acc Id: NP_757349   ⟸   NM_172210
- Peptide Label: isoform b precursor
- Sequence:
RefSeq Acc Id: XP_016855858   ⟸   XM_017000369
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSP00000327513   ⟸   ENST00000329608
RefSeq Acc Id: ENSP00000431547   ⟸   ENST00000525659
RefSeq Acc Id: ENSP00000358817   ⟸   ENST00000369802
RefSeq Acc Id: ENSP00000358816   ⟸   ENST00000369801
RefSeq Acc Id: ENSP00000407317   ⟸   ENST00000420111
RefSeq Acc Id: ENSP00000434527   ⟸   ENST00000527192
RefSeq Acc Id: ENSP00000433837   ⟸   ENST00000488198
RefSeq Acc Id: ENSP00000349854   ⟸   ENST00000357302

Promoters
RGD ID:6856530
Promoter ID:EPDNEW_H1430
Type:initiation region
Name:CSF1_2
Description:colony stimulating factor 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1431  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381109,910,621 - 109,910,681EPDNEW
RGD ID:6856532
Promoter ID:EPDNEW_H1431
Type:initiation region
Name:CSF1_1
Description:colony stimulating factor 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1430  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381109,910,849 - 109,910,909EPDNEW
RGD ID:6784973
Promoter ID:HG_KWN:4030
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000344188,   ENST00000357302,   NM_172210,   NM_172212,   OTTHUMT00000032208,   OTTHUMT00000032212
Position:
Human AssemblyChrPosition (strand)Source
Build 361110,254,756 - 110,255,256 (+)MPROMDB
RGD ID:6850146
Promoter ID:EP37006
Type:single initiation site
Name:HS_CSF1
Description:Colony-stimulating factor-1, CSF1 gene.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Notes:homology_group=Homology group 213; Mammalian colony stimulating factor 1
Experiment Methods:Sequencing of a full-length cDNA; Primer extension with homologous sequence ladder; experiments; performed with closely related gene
Regulation:various tissues; (induced by or strongly expressed in) proliferation
Position:
Human AssemblyChrPosition (strand)Source
Build 361110,254,991 - 110,255,051EPD
RGD ID:6784971
Promoter ID:HG_KWN:4031
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000032211
Position:
Human AssemblyChrPosition (strand)Source
Build 361110,258,251 - 110,258,751 (+)MPROMDB

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1p13.3-12(chr1:109756630-118650204)x3 copy number gain See cases [RCV000051827] Chr1:109756630..118650204 [GRCh38]
Chr1:110299252..119192827 [GRCh37]
Chr1:110100775..118994350 [NCBI36]
Chr1:1p13.3-12
pathogenic
GRCh38/hg38 1p21.2-13.2(chr1:101618097-111703028)x1 copy number loss See cases [RCV000053879] Chr1:101618097..111703028 [GRCh38]
Chr1:102083653..112245650 [GRCh37]
Chr1:101856241..112047173 [NCBI36]
Chr1:1p21.2-13.2
pathogenic
GRCh38/hg38 1p21.1-13.3(chr1:106074587-110144290)x1 copy number loss See cases [RCV000053881] Chr1:106074587..110144290 [GRCh38]
Chr1:106617209..110686912 [GRCh37]
Chr1:106418732..110488435 [NCBI36]
Chr1:1p21.1-13.3
pathogenic
GRCh38/hg38 1p21.3-13.3(chr1:97410602-110670510)x1 copy number loss See cases [RCV000053877] Chr1:97410602..110670510 [GRCh38]
Chr1:97876158..111213132 [GRCh37]
Chr1:97648746..111014655 [NCBI36]
Chr1:1p21.3-13.3
pathogenic
NM_000757.5(CSF1):c.648C>T (p.Ala216=) single nucleotide variant Malignant melanoma [RCV000064008] Chr1:109923269 [GRCh38]
Chr1:110465891 [GRCh37]
Chr1:110267414 [NCBI36]
Chr1:1p13.3
not provided
NM_000757.5(CSF1):c.653T>G (p.Val218Gly) single nucleotide variant Malignant melanoma [RCV000064009] Chr1:109923274 [GRCh38]
Chr1:110465896 [GRCh37]
Chr1:110267419 [NCBI36]
Chr1:1p13.3
not provided
NM_000757.5(CSF1):c.1418C>T (p.Ser473Phe) single nucleotide variant Malignant melanoma [RCV000064010] Chr1:109924039 [GRCh38]
Chr1:110466661 [GRCh37]
Chr1:110268184 [NCBI36]
Chr1:1p13.3
not provided
GRCh38/hg38 1p21.1-12(chr1:104325484-119977655)x3 copy number gain See cases [RCV000142953] Chr1:104325484..119977655 [GRCh38]
Chr1:104868106..120471049 [GRCh37]
Chr1:104669629..120321801 [NCBI36]
Chr1:1p21.1-12
pathogenic
GRCh38/hg38 1p21.1-13.2(chr1:105468292-112190626)x1 copy number loss See cases [RCV000142760] Chr1:105468292..112190626 [GRCh38]
Chr1:106010914..112733248 [GRCh37]
Chr1:105812437..112534771 [NCBI36]
Chr1:1p21.1-13.2
pathogenic
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3 copy number loss not provided [RCV000762767] Chr1:20608823..120546301 [GRCh37]
Chr1:1p36.12-12
likely benign
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p22.1-11.2(chr1:93837992-121343783)x3 copy number gain See cases [RCV000512354] Chr1:93837992..121343783 [GRCh37]
Chr1:1p22.1-11.2
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44
pathogenic
NC_000001.11:g.(?_103175204)_(111410059_?)del deletion Autistic disorder of childhood onset [RCV000754122] Chr1:103175204..111410059 [GRCh38]
Chr1:1p21.1-13.2
likely pathogenic
GRCh37/hg19 1p22.1-13.3(chr1:94054724-111671707)x3 copy number gain not provided [RCV000749068] Chr1:94054724..111671707 [GRCh37]
Chr1:1p22.1-13.3
pathogenic
NM_000757.6(CSF1):c.1592C>T (p.Ala531Val) single nucleotide variant not provided [RCV000922333] Chr1:109924798 [GRCh38]
Chr1:110467420 [GRCh37]
Chr1:1p13.3
likely benign
Single allele deletion 1p13.3 deletion syndrome [RCV000786772] Chr1:107779092..111199205 [GRCh37]
Chr1:1p13.3
likely pathogenic
Single allele deletion not provided [RCV000844956] Chr1:108926313..111266497 [GRCh37]
Chr1:1p13.3
not provided
NM_000757.6(CSF1):c.1533C>T (p.Ala511=) single nucleotide variant not provided [RCV000893543] Chr1:109924154 [GRCh38]
Chr1:110466776 [GRCh37]
Chr1:1p13.3
benign
GRCh37/hg19 1p13.3(chr1:110295035-110587956)x1 copy number loss not provided [RCV000847637] Chr1:110295035..110587956 [GRCh37]
Chr1:1p13.3
uncertain significance
NM_000757.6(CSF1):c.1212G>A (p.Arg404=) single nucleotide variant not provided [RCV000911636] Chr1:109923833 [GRCh38]
Chr1:110466455 [GRCh37]
Chr1:1p13.3
benign
NM_000757.6(CSF1):c.876G>A (p.Glu292=) single nucleotide variant not provided [RCV000955743] Chr1:109923497 [GRCh38]
Chr1:110466119 [GRCh37]
Chr1:1p13.3
benign
GRCh37/hg19 1p21.2-12(chr1:102021465-119737478) copy number loss Seizures [RCV001352640] Chr1:102021465..119737478 [GRCh37]
Chr1:1p21.2-12
pathogenic

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:2432 AgrOrtholog
COSMIC CSF1 COSMIC
Ensembl Genes ENSG00000184371 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000327513 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000349854 UniProtKB/TrEMBL
  ENSP00000358816 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000358817 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000407317 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000431547 UniProtKB/TrEMBL
  ENSP00000433837 UniProtKB/TrEMBL
  ENSP00000434527 UniProtKB/TrEMBL
Ensembl Transcript ENST00000329608 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000357302 UniProtKB/TrEMBL
  ENST00000369801 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000369802 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000420111 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000488198 UniProtKB/TrEMBL
  ENST00000525659 UniProtKB/TrEMBL
  ENST00000527192 UniProtKB/TrEMBL
GTEx ENSG00000184371 GTEx
HGNC ID HGNC:2432 ENTREZGENE
Human Proteome Map CSF1 Human Proteome Map
InterPro 4_helix_cytokine-like_core UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MCSF-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:1435 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 1435 ENTREZGENE
OMIM 120420 OMIM
PANTHER PTHR10058 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CSF-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA26935 PharmGKB
PIRSF MCSF-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47266 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A024R0A1_HUMAN UniProtKB/TrEMBL
  CSF1_HUMAN UniProtKB/Swiss-Prot
  E9PJA2_HUMAN UniProtKB/TrEMBL
  E9PKP4_HUMAN UniProtKB/TrEMBL
  E9PQ08_HUMAN UniProtKB/TrEMBL
  H7BY18_HUMAN UniProtKB/TrEMBL
  P09603 ENTREZGENE
UniProt Secondary A8K6J5 UniProtKB/Swiss-Prot
  Q13130 UniProtKB/Swiss-Prot
  Q14086 UniProtKB/Swiss-Prot
  Q14806 UniProtKB/Swiss-Prot
  Q5VVF3 UniProtKB/Swiss-Prot
  Q5VVF4 UniProtKB/Swiss-Prot
  Q9UQR8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-19 CSF1  colony stimulating factor 1    colony stimulating factor 1 (macrophage)  Symbol and/or name change 5135510 APPROVED