Slc38a3 (solute carrier family 38, member 3) - Rat Genome Database
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Gene: Slc38a3 (solute carrier family 38, member 3) Mus musculus
Analyze
Symbol: Slc38a3
Name: solute carrier family 38, member 3
RGD ID: 730998
MGI Page MGI
Description: Exhibits L-glutamine transmembrane transporter activity and L-histidine transmembrane transporter activity. Involved in amino acid transport; cellular response to potassium ion starvation; and positive regulation of transcription from RNA polymerase II promoter in response to acidic pH. Localizes to apical plasma membrane and integral component of plasma membrane. Is expressed in several structures, including central nervous system; metanephros; pancreas; pericardium; and retina. Orthologous to human SLC38A3 (solute carrier family 38 member 3); PARTICIPATES IN glutamate signaling pathway; INTERACTS WITH 1,1-dichloroethene; 1,2-dichloroethane; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 0610012J02Rik; D9Ucl; D9Ucla2; mNAT; N system amino acids transporter NAT-1; N-system amino acid transporter 1; Na(+)-coupled neutral amino acid transporter 3; Nat1; Slc38-3; Sn; Sn1; Snat3; sodium-coupled neutral amino acid transporter 3; solute carrier family 38 member 3; system N amino acid transporter 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,528,353 - 107,546,167 (-)NCBIGRCm39mm39
GRCm389107,651,154 - 107,668,968 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,650,634 - 107,669,530 (-)EnsemblGRCm38mm10GRCm38
MGSCv379107,553,486 - 107,569,705 (-)NCBIGRCm37mm9NCBIm37
MGSCv369107,509,256 - 107,525,475 (-)NCBImm8
Celera9107,256,617 - 107,273,287 (-)NCBICelera
Cytogenetic Map9F1NCBI
cM Map958.69NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
3-chloropropane-1,2-diol  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acetylleucyl-leucyl-norleucinal  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin B2  (ISO)
ammonium chloride  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
Brodifacoum  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
clofibric acid  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
furan  (ISO)
glafenine  (ISO)
hydrogen chloride  (EXP)
ketamine  (ISO)
lactacystin  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
nickel sulfate  (ISO)
O-methyleugenol  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (EXP)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
rac-lactic acid  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tauroursodeoxycholic acid  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP)
troglitazone  (ISO)
valproic acid  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
zidovudine  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8662233   PMID:8672141   PMID:8827514   PMID:8889548   PMID:10349636   PMID:10716701   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15226823   PMID:15489334   PMID:15899884  
PMID:16141072   PMID:16141073   PMID:17003226   PMID:18689705   PMID:18799693   PMID:19458124   PMID:21267068   PMID:21364602   PMID:21677750   PMID:21812036   PMID:21873635   PMID:24854847  
PMID:25116356   PMID:26490457   PMID:29561757   PMID:30634395   PMID:32046769  


Genomics

Comparative Map Data
Slc38a3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,528,353 - 107,546,167 (-)NCBIGRCm39mm39
GRCm389107,651,154 - 107,668,968 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,650,634 - 107,669,530 (-)EnsemblGRCm38mm10GRCm38
MGSCv379107,553,486 - 107,569,705 (-)NCBIGRCm37mm9NCBIm37
MGSCv369107,509,256 - 107,525,475 (-)NCBImm8
Celera9107,256,617 - 107,273,287 (-)NCBICelera
Cytogenetic Map9F1NCBI
cM Map958.69NCBI
SLC38A3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl350,205,246 - 50,221,486 (+)EnsemblGRCh38hg38GRCh38
GRCh38350,205,268 - 50,221,486 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37350,242,692 - 50,258,406 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36350,217,696 - 50,233,410 (+)NCBINCBI36hg18NCBI36
Build 34350,217,708 - 50,233,406NCBI
Celera350,215,521 - 50,231,235 (+)NCBI
Cytogenetic Map3p21.31NCBI
HuRef350,298,378 - 50,314,094 (+)NCBIHuRef
CHM1_1350,194,954 - 50,210,686 (+)NCBICHM1_1
Slc38a3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08116,406,258 - 116,423,752 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8116,406,241 - 116,422,366 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08115,761,368 - 115,779,081 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48112,898,405 - 112,914,444 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18112,917,859 - 112,933,899 (-)NCBI
Celera8107,630,163 - 107,646,202 (-)NCBICelera
Cytogenetic Map8q32NCBI
Slc38a3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555322,023,694 - 2,050,708 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555322,023,694 - 2,046,556 (+)NCBIChiLan1.0ChiLan1.0
SLC38A3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1351,367,939 - 51,383,657 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl351,367,939 - 51,383,657 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0350,133,631 - 50,149,394 (+)NCBIMhudiblu_PPA_v0panPan3
SLC38A3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2039,109,211 - 39,114,849 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12039,108,387 - 39,122,526 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Slc38a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365291,749,919 - 1,765,885 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC38A3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1332,683,191 - 32,704,535 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11332,683,131 - 32,699,803 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21335,861,884 - 35,878,403 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC38A3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl2211,591,717 - 11,606,355 (+)Ensembl
ChlSab1.12211,591,680 - 11,606,291 (+)NCBI
Slc38a3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247304,078,084 - 4,092,330 (+)NCBI

Position Markers
D9Dcr102  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,669,556 - 107,669,647UniSTSGRCm38
MGSCv379107,571,887 - 107,571,978UniSTSGRCm37
Celera9107,275,457 - 107,275,540UniSTS
Cytogenetic Map9F1UniSTS
cM Map9 UniSTS
UniSTS:236245  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,651,171 - 107,651,425UniSTSGRCm38
MGSCv379107,553,502 - 107,553,756UniSTSGRCm37
Celera9107,256,633 - 107,256,887UniSTS
Cytogenetic Map9F1UniSTS
cM Map963.0UniSTS
Slc38a3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9F1UniSTS
cM Map958.69UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1420
Count of miRNA genes:408
Interacting mature miRNAs:475
Transcripts:ENSMUST00000010208, ENSMUST00000167868, ENSMUST00000177567
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001199217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001199218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_023805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_871103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC162905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF159856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC055339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ183778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000010208   ⟹   ENSMUSP00000010208
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,651,155 - 107,667,374 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167868   ⟹   ENSMUSP00000130414
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,650,634 - 107,659,528 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177567   ⟹   ENSMUSP00000137561
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,651,161 - 107,668,968 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191923
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,656,897 - 107,659,219 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192211   ⟹   ENSMUSP00000141569
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,655,050 - 107,656,229 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192323   ⟹   ENSMUSP00000141850
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,657,630 - 107,669,530 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192990   ⟹   ENSMUSP00000141528
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,657,811 - 107,669,000 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193495
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,659,219 - 107,669,013 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193932   ⟹   ENSMUSP00000142087
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,651,161 - 107,667,426 (-)Ensembl
RefSeq Acc Id: ENSMUST00000194230
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,655,070 - 107,656,020 (-)Ensembl
RefSeq Acc Id: ENSMUST00000194895
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,651,157 - 107,669,003 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195033
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,656,402 - 107,657,261 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195739   ⟹   ENSMUSP00000141484
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,655,020 - 107,656,642 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195843   ⟹   ENSMUSP00000141552
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,658,636 - 107,665,461 (-)Ensembl
RefSeq Acc Id: NM_001199217   ⟹   NP_001186146
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,528,354 - 107,544,598 (-)NCBI
GRCm389107,651,155 - 107,667,399 (-)NCBI
Celera9107,256,617 - 107,274,878 (-)ENTREZGENE
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001199218   ⟹   NP_001186147
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,528,354 - 107,546,167 (-)NCBI
GRCm389107,651,155 - 107,668,968 (-)NCBI
Celera9107,256,617 - 107,274,878 (-)ENTREZGENE
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_023805   ⟹   NP_076294
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,528,354 - 107,544,598 (-)NCBI
GRCm389107,651,155 - 107,667,399 (-)NCBI
MGSCv379107,553,486 - 107,569,705 (-)RGD
Celera9107,256,617 - 107,274,878 (-)ENTREZGENE
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030244696   ⟹   XP_030100556
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,528,353 - 107,544,583 (-)NCBI
GRCm389107,651,154 - 107,667,394 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244697   ⟹   XP_030100557
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,528,353 - 107,544,593 (-)NCBI
GRCm389107,651,154 - 107,667,394 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036155378   ⟹   XP_036011271
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,528,353 - 107,544,620 (-)NCBI
RefSeq Acc Id: XR_871103
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,528,354 - 107,544,656 (-)NCBI
GRCm389107,651,155 - 107,667,421 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_076294   ⟸   NM_023805
- UniProtKB: Q9DCP2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001186147   ⟸   NM_001199218
- UniProtKB: Q9DCP2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001186146   ⟸   NM_001199217
- UniProtKB: Q9DCP2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030100557   ⟸   XM_030244697
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030100556   ⟸   XM_030244696
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000137561   ⟸   ENSMUST00000177567
RefSeq Acc Id: ENSMUSP00000142087   ⟸   ENSMUST00000193932
RefSeq Acc Id: ENSMUSP00000141569   ⟸   ENSMUST00000192211
RefSeq Acc Id: ENSMUSP00000141850   ⟸   ENSMUST00000192323
RefSeq Acc Id: ENSMUSP00000130414   ⟸   ENSMUST00000167868
RefSeq Acc Id: ENSMUSP00000141528   ⟸   ENSMUST00000192990
RefSeq Acc Id: ENSMUSP00000010208   ⟸   ENSMUST00000010208
RefSeq Acc Id: ENSMUSP00000141484   ⟸   ENSMUST00000195739
RefSeq Acc Id: ENSMUSP00000141552   ⟸   ENSMUST00000195843
RefSeq Acc Id: XP_036011271   ⟸   XM_036155378
- Peptide Label: isoform X1
Protein Domains
Aa_trans

Promoters
RGD ID:6848473
Promoter ID:MM_ACW:51959
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Liver,   Spleen
Transcripts:SLC38A3.GSEP07,   SLC38A3.ISEP07,   SLC38A3.JSEP07,   SLC38A3.KSEP07,   SLC38A3.LSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,557,801 - 107,560,102 (-)MPROMDB
RGD ID:6845170
Promoter ID:MM_KWN:58735
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:UC009RMN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,562,351 - 107,562,851 (-)MPROMDB
RGD ID:6848469
Promoter ID:MM_ACW:51960
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:SLC38A3.ESEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,567,451 - 107,567,951 (-)MPROMDB
RGD ID:6845169
Promoter ID:MM_KWN:58736
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Liver
Transcripts:NM_023805,   UC009RMP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,569,446 - 107,569,946 (-)MPROMDB
RGD ID:6845172
Promoter ID:MM_KWN:58737
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:UC009RMQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,571,051 - 107,571,551 (-)MPROMDB
RGD ID:8670820
Promoter ID:EPDNEW_M13440
Type:multiple initiation site
Name:Slc38a3_1
Description:Mus musculus solute carrier family 38, member 3 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389107,667,382 - 107,667,442EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1923507 AgrOrtholog
Ensembl Genes ENSMUSG00000010064 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000010208 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000130414 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000137561 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000141484 UniProtKB/TrEMBL
  ENSMUSP00000141528 UniProtKB/TrEMBL
  ENSMUSP00000141552 UniProtKB/TrEMBL
  ENSMUSP00000141569 UniProtKB/TrEMBL
  ENSMUSP00000141850 UniProtKB/TrEMBL
  ENSMUSP00000142087 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000010208 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000167868 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000177567 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000192211 UniProtKB/TrEMBL
  ENSMUST00000192323 UniProtKB/TrEMBL
  ENSMUST00000192990 UniProtKB/TrEMBL
  ENSMUST00000193932 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000195739 UniProtKB/TrEMBL
  ENSMUST00000195843 UniProtKB/TrEMBL
InterPro AA_transpt_TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:76257 UniProtKB/Swiss-Prot
MGD MGI:1923507 ENTREZGENE
NCBI Gene 76257 ENTREZGENE
Pfam Aa_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc38a3 PhenoGen
UniGene Mm.296560 ENTREZGENE
UniProt A0A0A6YWC0_MOUSE UniProtKB/TrEMBL
  A0A0A6YWF5_MOUSE UniProtKB/TrEMBL
  A0A0A6YWH4_MOUSE UniProtKB/TrEMBL
  A0A0A6YWI8_MOUSE UniProtKB/TrEMBL
  A0A0A6YX60_MOUSE UniProtKB/TrEMBL
  Q9DCP2 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8BS53 UniProtKB/Swiss-Prot
  Q9JLL8 UniProtKB/Swiss-Prot