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Gene: Clic6 (chloride intracellular channel 6) Rattus norvegicus
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Symbol: Clic6
Name: chloride intracellular channel 6
Description: Exhibits dopamine receptor binding activity; identical protein binding activity; and protein C-terminus binding activity. Predicted to be involved in chloride transmembrane transport and regulation of ion transmembrane transport. Localizes to plasma membrane. Orthologous to human CLIC6 (chloride intracellular channel 6); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chloride intracellular channel protein 6; Clic6b; intracellular chloride channel 6b
Orthologs:
Homo sapiens (human) : CLIC6 (chloride intracellular channel 6)  HGNC  Alliance
Mus musculus (house mouse) : Clic6 (chloride intracellular channel 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clic6 (chloride intracellular channel 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CLIC6 (chloride intracellular channel 6)
Canis lupus familiaris (dog) : CLIC6 (chloride intracellular channel 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clic6 (chloride intracellular channel 6)
Sus scrofa (pig) : CLIC6 (chloride intracellular channel 6)
Chlorocebus sabaeus (African green monkey) : CLIC6 (chloride intracellular channel 6)
Heterocephalus glaber (naked mole-rat) : Clic6 (chloride intracellular channel 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01132,655,653 - 32,698,004 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1132,655,616 - 32,699,382 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01136,259,974 - 36,302,131 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41132,516,492 - 32,559,195 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11132,572,734 - 32,615,438 (+)NCBI
Celera1131,389,140 - 31,431,254 (+)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Clic6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 727938
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.