Lgsn (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 9 | 40,912,398 - 40,943,955 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 33,416,362 - 33,447,919 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 9 | 33,420,484 - 33,447,907 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 9 | 41,913,213 - 41,940,643 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 9 | 47,045,193 - 47,072,615 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 9 | 45,327,050 - 45,354,472 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 9 | 37,458,603 - 37,490,117 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 9 | 37,462,693 - 37,490,108 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 36,263,149 - 36,294,523 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 29,844,176 - 29,871,557 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 9 | 29,845,589 - 29,872,970 (+) | NCBI | | | | | Celera | 9 | 31,238,716 - 31,265,934 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q21 | NCBI | | | | |
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LGSN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 63,275,951 - 63,573,607 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 63,275,951 - 63,319,983 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 63,985,856 - 64,029,888 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 64,047,515 - 64,087,841 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 64,047,520 - 64,087,841 | NCBI | | | | | Celera | 6 | 62,145,321 - 62,189,340 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q12 | NCBI | | | | | HuRef | 6 | 61,165,803 - 61,209,830 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 64,152,120 - 64,196,163 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 64,421,831 - 64,588,322 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Lgsn (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 31,215,362 - 31,243,806 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 31,215,482 - 31,243,806 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 31,176,281 - 31,204,725 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 31,176,401 - 31,204,725 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 31,233,280 - 31,261,570 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 31,120,981 - 31,149,271 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 30,973,296 - 31,001,446 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | B | NCBI | | | | | cM Map | 1 | 11.53 | NCBI | | | | |
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Lgsn (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955502 | 483,191 - 552,272 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955502 | 522,492 - 551,842 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LGSN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 5 | 78,141,446 - 78,185,404 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 72,801,340 - 72,845,297 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 60,964,873 - 61,008,833 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 66,235,347 - 66,279,272 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 66,239,052 - 66,280,600 (-) | Ensembl | panpan1.1 | | panPan2 | |
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LGSN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 12 | 26,852,832 - 26,884,307 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 26,852,851 - 26,919,138 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 26,761,476 - 26,792,749 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 27,389,310 - 27,419,270 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 27,389,326 - 27,454,223 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 26,894,374 - 26,924,142 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 26,976,959 - 27,006,723 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 27,074,028 - 27,103,801 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Lgsn (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404946 | 62,303,468 - 62,335,915 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936476 | 1,624,222 - 1,659,510 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936476 | 1,624,287 - 1,656,734 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LGSN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 82,360,774 - 82,387,717 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 82,360,058 - 82,388,479 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 92,641,343 - 92,671,894 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LGSN (Chlorocebus sabaeus - green monkey) |
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Lgsn (Heterocephalus glaber - naked mole-rat) |
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