Gene: Opn5 (opsin 5) Rattus norvegicus
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Symbol: Opn5
Name: opsin 5
Description: ENCODES a protein that exhibits 11-cis retinal binding (ortholog); G-protein coupled receptor activity (ortholog); INVOLVED IN detection of visible light (inferred); G-protein coupled receptor signaling pathway (inferred); protein-chromophore linkage (inferred); FOUND IN integral component of membrane (inferred); INTERACTS WITH bisphenol A; 13-BETA-ETHYL-17-ALPHA-ETHYNYL-17-BETA-HYDROXYGON-4-EN-3-ONE (ortholog); arsane (ortholog)
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: G protein-coupled receptor 136; Gpr136; opsin-5
Orthologs:
Homo sapiens (human) : OPN5 (opsin 5)  HGNC  Alliance
Mus musculus (house mouse) : Opn5 (opsin 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Opn5 (opsin 5)
Pan paniscus (bonobo/pygmy chimpanzee) : OPN5 (opsin 5)
Canis lupus familiaris (dog) : OPN5 (opsin 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Opn5 (opsin 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0921,045,457 - 21,092,517 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0919,906,290 - 19,953,532 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4914,124,601 - 14,171,851 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1914,121,922 - 14,169,169 (+)NCBI
Celera916,070,854 - 16,117,985 (+)NCBICelera
Cytogenetic Map9q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Opn5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 727869
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2018-06-05
Status: ACTIVE