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Gene: Smagp (small cell adhesion glycoprotein) Rattus norvegicus
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Symbol: Smagp
Name: small cell adhesion glycoprotein
Description: Predicted to localize to the cell junction; nucleoplasm; and plasma membrane. Orthologous to human SMAGP (small cell adhesion glycoprotein); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; amitriptyline.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC124543; small cell transmembrane and glycosylated protein; small trans-membrane and glycosylated protein; small transmembrane and glycosylated protein
Orthologs:
Homo sapiens (human) : SMAGP (small cell adhesion glycoprotein)  HGNC  Alliance
Mus musculus (house mouse) : Smagp (small cell adhesion glycoprotein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smagp (small cell adhesion glycoprotein)
Pan paniscus (bonobo/pygmy chimpanzee) : SMAGP (small cell adhesion glycoprotein)
Canis lupus familiaris (dog) : SMAGP (small cell adhesion glycoprotein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smagp (small cell adhesion glycoprotein)
Sus scrofa (pig) : SMAGP (small cell adhesion glycoprotein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07142,244,295 - 142,260,896 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7142,244,295 - 142,260,896 (-)Ensembl
Rnor_5.07140,048,950 - 140,066,042 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47139,367,386 - 139,403,817 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17139,443,822 - 139,480,254 (-)NCBI
Celera7128,195,494 - 128,213,797 (-)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smagp
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 727777
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.