Gm20916 (predicted gene, 20916) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Gm20916 (predicted gene, 20916) Mus musculus
Analyze
No known orthologs.
Symbol: Gm20916
Name: predicted gene, 20916
RGD ID: 7180385
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: X-linked lymphocyte-regulated protein PM1-like
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39Y79,332,257 - 79,356,780 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblY79,330,791 - 79,356,976 (+)EnsemblGRCm39 Ensembl
GRCm38Y79,320,988 - 79,345,511 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblY55,213,720 - 55,239,871 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 EnsemblY87,116,821 - 87,142,917 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 EnsemblY35,105,684 - 35,131,833 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 EnsemblY79,319,565 - 79,345,707 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 EnsemblY35,895,328 - 35,921,526 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic MapYDNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Gm20916
1 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_030251608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC182037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_030251608   ⟹   XP_030107468
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y79,332,257 - 79,356,780 (+)NCBI
GRCm38Y79,320,988 - 79,345,511 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_030107468 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000140607
Reference Protein Sequences
RefSeq Acc Id: XP_030107468   ⟸   XM_030251608
- UniProtKB: A0A087WRK1 (UniProtKB/TrEMBL),   A0A087WS79 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000094399 Ensembl
  ENSMUSG00000094570 Ensembl
  ENSMUSG00000094746 Ensembl, ENTREZGENE
  ENSMUSG00000095793 Ensembl
  ENSMUSG00000096650 Ensembl
Ensembl Transcript ENSMUST00000185338 ENTREZGENE
MGD MGI:5434272 ENTREZGENE
NCBI Gene Gm20916 ENTREZGENE
PhenoGen Gm20916 PhenoGen
UniProt A0A087WRK1 ENTREZGENE
  A0A087WS79 ENTREZGENE