Gm21209 (predicted gene, 21209) - Rat Genome Database

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Gene: Gm21209 (predicted gene, 21209) Mus musculus
Analyze
No known orthologs.
Symbol: Gm21209
Name: predicted gene, 21209
RGD ID: 7179522
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: X-linked lymphocyte-regulated protein PM1; X-linked lymphocyte-regulated protein PM1-like
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39Y49,569,158 - 49,593,809 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblY49,567,735 - 49,594,004 (+)EnsemblGRCm39 Ensembl
GRCm38Y49,572,579 - 49,597,230 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblY49,571,156 - 49,597,425 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic MapYC1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_017318707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC239756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000178556   ⟹   ENSMUSP00000136754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY49,567,745 - 49,593,996 (+)Ensembl
GRCm38.p6 EnsemblY49,572,579 - 49,597,230 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189354   ⟹   ENSMUSP00000139400
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblY49,567,735 - 49,594,004 (+)Ensembl
GRCm38.p6 EnsemblY49,571,156 - 49,597,425 (+)Ensembl
RefSeq Acc Id: XM_017318707   ⟹   XP_017174196
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39Y49,569,158 - 49,593,809 (+)NCBI
GRCm38Y49,572,579 - 49,597,230 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_017174196   ⟸   XM_017318707
- UniProtKB: A0A9L6KE01 (UniProtKB/TrEMBL),   A0A9L6KE25 (UniProtKB/TrEMBL),   A0A9L6KEG3 (UniProtKB/TrEMBL),   A0A9L6KEH4 (UniProtKB/TrEMBL),   J3QNI1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000136754   ⟸   ENSMUST00000178556
RefSeq Acc Id: ENSMUSP00000139400   ⟸   ENSMUST00000189354
Protein Domains
XLR/SYCP3/FAM9

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A087WQA3-F1-model_v2 AlphaFold A0A087WQA3 1-222 view protein structure


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000094616 UniProtKB/TrEMBL
  ENSMUSG00000094647 UniProtKB/TrEMBL
  ENSMUSG00000094821 UniProtKB/TrEMBL
  ENSMUSG00000095979 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSG00000096016 UniProtKB/TrEMBL
  ENSMUSG00000096902 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000178115.3 UniProtKB/TrEMBL
  ENSMUST00000178505.3 UniProtKB/TrEMBL
  ENSMUST00000178556 ENTREZGENE
  ENSMUST00000178556.3 UniProtKB/TrEMBL
  ENSMUST00000179073.3 UniProtKB/TrEMBL
  ENSMUST00000180329.2 UniProtKB/TrEMBL
  ENSMUST00000186890.7 UniProtKB/TrEMBL
  ENSMUST00000186938.7 UniProtKB/TrEMBL
  ENSMUST00000189084.7 UniProtKB/TrEMBL
  ENSMUST00000189354.7 UniProtKB/TrEMBL
  ENSMUST00000189422.7 UniProtKB/TrEMBL
  ENSMUST00000191305.7 UniProtKB/TrEMBL
InterPro Cor1/Xlr/Xmr UniProtKB/TrEMBL
KEGG Report mmu:108168515 UniProtKB/TrEMBL
  mmu:108168520 UniProtKB/TrEMBL
  mmu:108168524 UniProtKB/TrEMBL
  mmu:108168525 UniProtKB/TrEMBL
  mmu:108168527 UniProtKB/TrEMBL
  mmu:108168530 UniProtKB/TrEMBL
  mmu:108168532 UniProtKB/TrEMBL
  mmu:108168533 UniProtKB/TrEMBL
  mmu:108168595 UniProtKB/TrEMBL
MGD MGI:5434564 ENTREZGENE
NCBI Gene Gm21209 ENTREZGENE
PANTHER EG546282 PROTEIN-RELATED UniProtKB/TrEMBL
  XLR/SCP3/FAM9 UniProtKB/TrEMBL
Pfam Cor1 UniProtKB/TrEMBL
PhenoGen Gm21209 PhenoGen
UniProt A0A087WQA3_MOUSE UniProtKB/TrEMBL
  A0A9L6KE01 ENTREZGENE
  A0A9L6KE25 ENTREZGENE
  A0A9L6KEG3 ENTREZGENE
  A0A9L6KEH4 ENTREZGENE
  J3QNI1 ENTREZGENE, UniProtKB/TrEMBL