EEF1GP7 (eukaryotic translation elongation factor 1 gamma pseudogene 7) - Rat Genome Database

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Gene: EEF1GP7 (eukaryotic translation elongation factor 1 gamma pseudogene 7) Homo sapiens
Analyze
Symbol: EEF1GP7
Name: eukaryotic translation elongation factor 1 gamma pseudogene 7
RGD ID: 7174918
HGNC Page HGNC:44562
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: EEF1G  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38152,573,107 - 52,573,899 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl152,573,114 - 52,573,816 (+)EnsemblGRCh38hg38GRCh38
GRCh37153,038,779 - 53,039,571 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36152,793,038 - 52,812,081 (+)NCBINCBI36Build 36hg18NCBI36
Celera151,325,485 - 51,326,188 (+)NCBICelera
Cytogenetic Map1p32.3NCBI
HuRef151,154,706 - 51,155,409 (+)NCBIHuRef
CHM1_1153,156,136 - 53,156,839 (+)NCBICHM1_1
T2T-CHM13v2.0152,454,577 - 52,455,369 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:85
Count of miRNA genes:84
Interacting mature miRNAs:84
Transcripts:ENST00000422983
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 15 10 57 5 121 5 55 12 88 22 453 54 39
Below cutoff 608 517 816 118 526 70 1208 430 1362 145 510 693 52 303 747 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000422983
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl152,573,114 - 52,573,816 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC EEF1GP7 COSMIC
Ensembl Genes ENSG00000236290 Ensembl, ENTREZGENE
GTEx ENSG00000236290 GTEx
HGNC ID HGNC:44562 ENTREZGENE
Human Proteome Map EEF1GP7 Human Proteome Map
NCBI Gene EEF1GP7 ENTREZGENE