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Gene: Apoc4 (apolipoprotein C4) Rattus norvegicus
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Symbol: Apoc4
Name: apolipoprotein C4
Description: Predicted to be involved in positive regulation of sequestering of triglyceride and triglyceride homeostasis. Predicted to localize to the high-density lipoprotein particle and very-low-density lipoprotein particle. Orthologous to human APOC4 (apolipoprotein C4); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Acl; apo-CIV; apoC-IV; apolipoprotein C-IV; apolipoprotein C2 linked; apolipoprotein CIV; apolipoprotein E-linked; ECL; LOC680551; similar to Apolipoprotein C-IV precursor (Apo-CIV) (ApoC-IV) (Apolipoprotein C2-linked) (ACL)
Orthologs:
Homo sapiens (human) : APOC4 (apolipoprotein C4)  HGNC  Alliance
Mus musculus (house mouse) : Apoc4 (apolipoprotein C-IV)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Apoc4 (apolipoprotein C4)
Pan paniscus (bonobo/pygmy chimpanzee) : APOC4 (apolipoprotein C4)
Canis lupus familiaris (dog) : APOC4 (apolipoprotein C4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Apoc4 (apolipoprotein C4)
Sus scrofa (pig) : APOC4 (apolipoprotein C4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0180,595,339 - 80,599,525 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0181,860,928 - 81,865,003 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,985,350 - 78,989,564 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1179,063,617 - 79,067,655 (+)NCBI
Celera173,795,049 - 73,799,140 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Apoc4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 70959
Created: 2002-07-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.