Maged2 (MAGE family member D2) - Rat Genome Database

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Gene: Maged2 (MAGE family member D2) Rattus norvegicus
Analyze
Symbol: Maged2
Name: MAGE family member D2
RGD ID: 70899
Description: Predicted to be involved in female pregnancy; negative regulation of transcription by RNA polymerase II; and renal sodium ion absorption. Predicted to be located in cytosol; nucleolus; and nucleoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in Bartter disease type 5. Orthologous to human MAGED2 (MAGE family member D2); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: melanoma antigen family D, 2; melanoma antigen, family D, 2; melanoma-associated antigen D2; MGC124946
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X23,160,928 - 23,364,994 (-)NCBIGRCr8
mRatBN7.2X19,733,593 - 19,741,769 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX19,733,597 - 19,740,477 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX17,176,379 - 17,184,564 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X22,939,005 - 22,947,190 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X20,246,651 - 20,254,825 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0533,174,539 - 33,182,715 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl533,174,542 - 33,182,715 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0537,832,720 - 37,840,896 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X40,056,332 - 40,064,505 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X40,109,805 - 40,116,420 (-)NCBI
CeleraX19,993,517 - 20,001,690 (-)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4,6-tribromophenol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-chloropropane-1,2-diol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
actinomycin D  (ISO)
amitrole  (EXP)
ammonium chloride  (EXP)
amphetamine  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
avobenzone  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorohydrocarbon  (EXP)
choline  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
corticosterone  (EXP)
coumestrol  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
diuron  (EXP)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (EXP)
ethyl methanesulfonate  (ISO)
fenthion  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
furan  (EXP)
gentamycin  (EXP)
indole-3-methanol  (EXP)
indometacin  (ISO)
ivermectin  (ISO)
L-methionine  (ISO)
lithium chloride  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
methidathion  (ISO)
methimazole  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
Nutlin-3  (ISO)
oxaliplatin  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
piperonyl butoxide  (ISO)
pirinixic acid  (ISO)
rotenone  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (EXP)
thiram  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
triptonide  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IEA,ISO)
nucleolus  (IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11856887   PMID:12477932   PMID:17154719   PMID:19946888   PMID:27120771  


Genomics

Comparative Map Data
Maged2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X23,160,928 - 23,364,994 (-)NCBIGRCr8
mRatBN7.2X19,733,593 - 19,741,769 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX19,733,597 - 19,740,477 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX17,176,379 - 17,184,564 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X22,939,005 - 22,947,190 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X20,246,651 - 20,254,825 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0533,174,539 - 33,182,715 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl533,174,542 - 33,182,715 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0537,832,720 - 37,840,896 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X40,056,332 - 40,064,505 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X40,109,805 - 40,116,420 (-)NCBI
CeleraX19,993,517 - 20,001,690 (-)NCBICelera
Cytogenetic MapXq12NCBI
MAGED2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X54,807,745 - 54,816,015 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX54,807,599 - 54,816,015 (+)EnsemblGRCh38hg38GRCh38
GRCh37X54,834,178 - 54,842,448 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X54,850,896 - 54,859,170 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X54,718,513 - 54,725,466NCBI
CeleraX58,666,731 - 58,675,005 (+)NCBICelera
Cytogenetic MapXp11.21NCBI
HuRefX51,883,893 - 51,892,287 (+)NCBIHuRef
CHM1_1X54,824,736 - 54,833,010 (+)NCBICHM1_1
T2T-CHM13v2.0X54,098,628 - 54,106,898 (+)NCBIT2T-CHM13v2.0
Maged2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X149,589,417 - 149,597,358 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX149,589,366 - 149,597,341 (-)EnsemblGRCm39 Ensembl
GRCm38X150,806,421 - 150,814,362 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX150,806,370 - 150,814,345 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X147,240,964 - 147,248,825 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X146,147,137 - 146,154,998 (-)NCBIMGSCv36mm8
CeleraX133,569,891 - 133,573,893 (-)NCBICelera
Cytogenetic MapXF3NCBI
cM MapX68.46NCBI
Maged2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554752,038,189 - 2,046,290 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554752,038,189 - 2,046,240 (-)NCBIChiLan1.0ChiLan1.0
MAGED2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X56,195,451 - 56,203,889 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X56,199,138 - 56,207,496 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X47,010,009 - 47,018,370 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X55,241,161 - 55,249,577 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX55,241,161 - 55,249,256 (+)Ensemblpanpan1.1panPan2
MAGED2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X46,502,459 - 46,510,990 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX46,502,381 - 46,509,436 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX37,893,821 - 37,902,325 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X50,062,517 - 50,071,011 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX50,062,442 - 50,070,804 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X46,330,703 - 46,339,207 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X46,770,546 - 46,779,050 (+)NCBIUNSW_CanFamBas_1.0
Maged2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X39,299,605 - 39,307,769 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367511,639,276 - 1,647,180 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367511,639,276 - 1,647,494 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAGED2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X50,898,166 - 50,906,667 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX50,898,324 - 50,906,260 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660864,865,382 - 4,873,814 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Maged2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462491037,155 - 47,711 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Maged2
40 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:190
Count of miRNA genes:149
Interacting mature miRNAs:162
Transcripts:ENSRNOT00000044483
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X144812931706553Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
10755455Coatc13Coat color QTL 130coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7440600049406000Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X449454949494549Rat
634325Bw13Body weight QTL 130body mass (VT:0001259)body weight (CMO:0000012)X144797220991088Rat
631204Gluco15Glucose level QTL 150.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X162371522646544Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat

Markers in Region
RH129635  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X19,733,601 - 19,733,769 (+)MAPPERmRatBN7.2
Rnor_6.0533,174,548 - 33,174,715NCBIRnor6.0
Rnor_5.0537,832,729 - 37,832,896UniSTSRnor5.0
RGSC_v3.4X40,056,338 - 40,056,505UniSTSRGSC3.4
CeleraX19,993,523 - 19,993,690UniSTS
RH 3.4 MapX211.23UniSTS
Cytogenetic MapXq21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001271109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_080479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006237924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063279731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AJ293617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY724507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM059132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000044483   ⟹   ENSRNOP00000042515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl533,174,542 - 33,182,715 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000080358   ⟹   ENSRNOP00000074736
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX19,733,597 - 19,740,477 (-)Ensembl
Rnor_6.0 Ensembl533,174,542 - 33,182,147 (-)Ensembl
RefSeq Acc Id: NM_001271109   ⟹   NP_001258038
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X23,160,931 - 23,169,104 (-)NCBI
mRatBN7.2X19,733,596 - 19,741,769 (-)NCBI
Rnor_6.0533,174,542 - 33,182,715 (-)NCBI
Rnor_5.0537,832,720 - 37,840,896 (-)NCBI
CeleraX19,993,517 - 20,001,690 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001271110   ⟹   NP_001258039
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X23,160,931 - 23,168,520 (-)NCBI
mRatBN7.2X19,733,596 - 19,741,185 (-)NCBI
Rnor_6.0533,174,542 - 33,182,131 (-)NCBI
Rnor_5.0537,832,720 - 37,840,896 (-)NCBI
CeleraX19,993,517 - 20,001,106 (-)NCBI
Sequence:
RefSeq Acc Id: NM_080479   ⟹   NP_536727
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X23,160,931 - 23,169,104 (-)NCBI
mRatBN7.2X19,733,596 - 19,741,769 (-)NCBI
Rnor_6.0533,174,542 - 33,182,715 (-)NCBI
Rnor_5.0537,832,720 - 37,840,896 (-)NCBI
RGSC_v3.4X40,056,332 - 40,064,505 (-)RGD
CeleraX19,993,517 - 20,001,690 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006237924   ⟹   XP_006237986
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X23,160,928 - 23,167,833 (-)NCBI
mRatBN7.2X19,733,593 - 19,740,468 (-)NCBI
Rnor_6.0533,174,539 - 33,181,398 (-)NCBI
Rnor_5.0537,832,720 - 37,840,896 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593115   ⟹   XP_017448604
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X23,160,928 - 23,167,926 (-)NCBI
mRatBN7.2X19,733,593 - 19,740,645 (-)NCBI
Rnor_6.0533,174,539 - 33,181,542 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063279729   ⟹   XP_063135799
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X23,160,928 - 23,364,994 (-)NCBI
RefSeq Acc Id: XM_063279730   ⟹   XP_063135800
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X23,160,928 - 23,364,994 (-)NCBI
RefSeq Acc Id: XM_063279731   ⟹   XP_063135801
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X23,160,928 - 23,167,800 (-)NCBI
RefSeq Acc Id: NP_536727   ⟸   NM_080479
- UniProtKB: Q3B7U1 (UniProtKB/TrEMBL),   A0A0G2K8U1 (UniProtKB/TrEMBL),   Q9EPI7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258038   ⟸   NM_001271109
- UniProtKB: Q3B7U1 (UniProtKB/TrEMBL),   A0A0G2K8U1 (UniProtKB/TrEMBL),   Q9EPI7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258039   ⟸   NM_001271110
- UniProtKB: Q3B7U1 (UniProtKB/TrEMBL),   A0A0G2K8U1 (UniProtKB/TrEMBL),   Q9EPI7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006237986   ⟸   XM_006237924
- Peptide Label: isoform X1
- UniProtKB: Q3B7U1 (UniProtKB/TrEMBL),   A0A0G2K8U1 (UniProtKB/TrEMBL),   Q9EPI7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017448604   ⟸   XM_017593115
- Peptide Label: isoform X1
- UniProtKB: Q3B7U1 (UniProtKB/TrEMBL),   A0A0G2K8U1 (UniProtKB/TrEMBL),   Q9EPI7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074736   ⟸   ENSRNOT00000080358
Ensembl Acc Id: ENSRNOP00000042515   ⟸   ENSRNOT00000044483
RefSeq Acc Id: XP_063135800   ⟸   XM_063279730
- Peptide Label: isoform X1
- UniProtKB: Q9EPI7 (UniProtKB/TrEMBL),   A0A0G2K8U1 (UniProtKB/TrEMBL),   Q3B7U1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063135799   ⟸   XM_063279729
- Peptide Label: isoform X1
- UniProtKB: Q9EPI7 (UniProtKB/TrEMBL),   A0A0G2K8U1 (UniProtKB/TrEMBL),   Q3B7U1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063135801   ⟸   XM_063279731
- Peptide Label: isoform X1
- UniProtKB: Q9EPI7 (UniProtKB/TrEMBL),   A0A0G2K8U1 (UniProtKB/TrEMBL),   Q3B7U1 (UniProtKB/TrEMBL)
Protein Domains
MAGE

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3B7U1-F1-model_v2 AlphaFold Q3B7U1 1-618 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693585
Promoter ID:EPDNEW_R4110
Type:initiation region
Name:Maged2_2
Description:MAGE family member D2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R4111  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0533,182,120 - 33,182,180EPDNEW
RGD ID:13693586
Promoter ID:EPDNEW_R4111
Type:multiple initiation site
Name:Maged2_1
Description:MAGE family member D2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R4110  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0533,182,729 - 33,182,789EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:70899 AgrOrtholog
BioCyc Gene G2FUF-2804 BioCyc
Ensembl Genes ENSRNOG00000002449 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000080358.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.1200 UniProtKB/TrEMBL
  1.10.10.1210 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7135182 IMAGE-MGC_LOAD
  IMAGE:7459969 IMAGE-MGC_LOAD
InterPro MAGE UniProtKB/TrEMBL
  MAGE UniProtKB/TrEMBL
  MAGE_WH1 UniProtKB/TrEMBL
  MAGE_WH2 UniProtKB/TrEMBL
KEGG Report rno:113947 UniProtKB/TrEMBL
MGC_CLONE MGC:124946 IMAGE-MGC_LOAD
  MGC:93244 IMAGE-MGC_LOAD
NCBI Gene 113947 ENTREZGENE
PANTHER PTHR11736 UniProtKB/TrEMBL
  PTHR11736:SF11 UniProtKB/TrEMBL
Pfam MAGE UniProtKB/TrEMBL
PhenoGen Maged2 PhenoGen
PROSITE MAGE UniProtKB/TrEMBL
RatGTEx ENSRNOG00000002449 RatGTEx
SMART MAGE UniProtKB/TrEMBL
UniProt A0A0G2K8U1 ENTREZGENE, UniProtKB/TrEMBL
  A6KL91_RAT UniProtKB/TrEMBL
  Q3B7U1 ENTREZGENE, UniProtKB/TrEMBL
  Q9EPI7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-10 Maged2  MAGE family member D2  Maged2  melanoma antigen, family D, 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-07-09 Maged2  melanoma antigen, family D, 2      Symbol and Name updated to reflect Human and Mouse nomenclature 70877 APPROVED

RGD Curation Notes
Note Type Note Reference