Akap14 (A-kinase anchoring protein 14) - Rat Genome Database

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Gene: Akap14 (A-kinase anchoring protein 14) Rattus norvegicus
Analyze
Symbol: Akap14
Name: A-kinase anchoring protein 14
RGD ID: 708510
Description: Enables protein kinase A binding activity. Involved in spermatogenesis. Located in sperm fibrous sheath. Orthologous to human AKAP14 (A-kinase anchoring protein 14); PARTICIPATES IN protein kinase A (PKA) signaling pathway; INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: A kinase (PRKA) anchor protein 14; A-kinase anchor protein 14; AKAP-14; LOC60332; TAKAP-1.2; testis-specific A-kinase-anchoring protein TAKAP-80; Testis-specific A-kinase-anchoring-protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X121,261,195 - 121,276,376 (-)NCBIGRCr8
mRatBN7.2X116,395,512 - 116,410,697 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX116,395,516 - 116,410,697 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX118,499,111 - 118,514,245 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X122,068,246 - 122,083,383 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X119,614,305 - 119,629,441 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X123,773,430 - 123,788,898 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX123,773,430 - 123,788,898 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X123,909,957 - 123,925,151 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X7,744,305 - 7,759,380 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X7,749,860 - 7,764,934 (+)NCBI
CeleraX115,623,134 - 115,638,227 (-)NCBICelera
Cytogenetic MapXq35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. A-kinase anchoring proteins: from protein complexes to physiology and disease. Carnegie GK, etal., IUBMB Life. 2009 Apr;61(4):394-406.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Cloning and characterization of a testis-specific, developmentally regulated A-kinase-anchoring protein (TAKAP-80) present on the fibrous sheath of rat sperm. Mei X, etal., Eur J Biochem 1997 Jun 1;246(2):425-32.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Localized effects of cAMP mediated by distinct routes of protein kinase A. Tasken K and Aandahl EM, Physiol Rev. 2004 Jan;84(1):137-67.
Additional References at PubMed
PMID:12475942  


Genomics

Comparative Map Data
Akap14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X121,261,195 - 121,276,376 (-)NCBIGRCr8
mRatBN7.2X116,395,512 - 116,410,697 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX116,395,516 - 116,410,697 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX118,499,111 - 118,514,245 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X122,068,246 - 122,083,383 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X119,614,305 - 119,629,441 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X123,773,430 - 123,788,898 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX123,773,430 - 123,788,898 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X123,909,957 - 123,925,151 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X7,744,305 - 7,759,380 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X7,749,860 - 7,764,934 (+)NCBI
CeleraX115,623,134 - 115,638,227 (-)NCBICelera
Cytogenetic MapXq35NCBI
AKAP14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X119,895,893 - 119,920,716 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX119,895,837 - 119,920,716 (+)EnsemblGRCh38hg38GRCh38
GRCh37X119,029,856 - 119,054,679 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X118,913,964 - 118,938,707 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X118,811,817 - 118,836,559NCBI
CeleraX119,484,561 - 119,509,308 (+)NCBICelera
Cytogenetic MapXq24NCBI
HuRefX108,526,427 - 108,532,714 (+)NCBIHuRef
CHM1_1X118,940,982 - 118,965,708 (+)NCBICHM1_1
T2T-CHM13v2.0X118,271,014 - 118,295,842 (+)NCBIT2T-CHM13v2.0
Akap14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X36,414,351 - 36,432,495 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX36,414,351 - 36,432,495 (-)EnsemblGRCm39 Ensembl
GRCm38X37,150,698 - 37,168,842 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX37,150,698 - 37,168,842 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X34,690,693 - 34,708,837 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X33,582,143 - 33,600,287 (-)NCBIMGSCv36mm8
CeleraX23,874,320 - 23,892,464 (-)NCBICelera
Cytogenetic MapXA3.3NCBI
cM MapX21.57NCBI
Akap14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955534120,603 - 137,227 (-)NCBIChiLan1.0ChiLan1.0
AKAP14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X119,302,536 - 119,332,966 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X119,306,633 - 119,332,104 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X108,940,756 - 108,984,227 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X119,355,712 - 119,380,449 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX119,355,712 - 119,380,449 (+)Ensemblpanpan1.1panPan2
AKAP14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X91,900,154 - 91,927,629 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX77,974,562 - 77,995,029 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X93,638,719 - 93,659,194 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX93,637,986 - 93,659,085 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X91,091,653 - 91,112,118 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X92,851,191 - 92,871,607 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X92,580,095 - 92,600,580 (+)NCBIUU_Cfam_GSD_1.0
Akap14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X90,931,967 - 90,945,924 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647910,051,669 - 10,055,518 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKAP14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1X98,234,469 - 98,255,396 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X113,359,466 - 113,377,230 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AKAP14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366606532,682,764 - 32,711,235 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Akap14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248953,829,155 - 3,834,955 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Akap14
71 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:63
Count of miRNA genes:60
Interacting mature miRNAs:61
Transcripts:ENSRNOT00000009123
Prediction methods:Microtar, Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX112934952138400867Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
5685004Bss104Bone structure and strength QTL 1043.9tibia area (VT:1000281)tibia area measurement (CMO:0001382)X113805422126975220Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat

Markers in Region
AI044873  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8X121,260,873 - 121,261,094 (+)Marker Load Pipeline
mRatBN7.2X116,395,190 - 116,395,411 (+)MAPPERmRatBN7.2
Rnor_6.0X123,773,109 - 123,773,329NCBIRnor6.0
Rnor_5.0X123,909,636 - 123,909,856UniSTSRnor5.0
RGSC_v3.4X7,759,481 - 7,759,701UniSTSRGSC3.4
CeleraX115,622,813 - 115,623,033UniSTS
RH 3.4 Map5789.8UniSTS
Cytogenetic MapXq12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 9 27 96 55 57 26 25 26 6 137 67 79 27 50 31

Sequence


Ensembl Acc Id: ENSRNOT00000009123   ⟹   ENSRNOP00000009123
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX116,395,516 - 116,410,697 (-)Ensembl
Rnor_6.0 EnsemblX123,773,430 - 123,788,898 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105076   ⟹   ENSRNOP00000095169
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX116,395,516 - 116,410,693 (-)Ensembl
RefSeq Acc Id: NM_021703   ⟹   NP_067735
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X121,261,195 - 121,276,376 (-)NCBI
mRatBN7.2X116,395,512 - 116,410,697 (-)NCBI
Rnor_6.0X123,773,430 - 123,788,898 (-)NCBI
Rnor_5.0X123,909,957 - 123,925,151 (-)NCBI
RGSC_v3.4X7,744,305 - 7,759,380 (+)RGD
CeleraX115,623,134 - 115,638,227 (-)RGD
Sequence:
RefSeq Acc Id: XM_039100002   ⟹   XP_038955930
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X121,266,290 - 121,276,278 (-)NCBI
mRatBN7.2X116,400,606 - 116,410,607 (-)NCBI
Protein Sequences
Protein RefSeqs NP_067735 (Get FASTA)   NCBI Sequence Viewer  
  XP_038955930 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAA05485 (Get FASTA)   NCBI Sequence Viewer  
  EDM10840 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000009123
  ENSRNOP00000009123.2
  ENSRNOP00000095169.1
GenBank Protein O35817 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_067735   ⟸   NM_021703
- UniProtKB: O35817 (UniProtKB/Swiss-Prot),   A6JMH8 (UniProtKB/TrEMBL),   A0A8I6ANA3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000009123   ⟸   ENSRNOT00000009123
RefSeq Acc Id: XP_038955930   ⟸   XM_039100002
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000095169   ⟸   ENSRNOT00000105076

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35817-F1-model_v2 AlphaFold O35817 1-502 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:708510 AgrOrtholog
BioCyc Gene G2FUF-1294 BioCyc
Ensembl Genes ENSRNOG00000006899 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000009123 ENTREZGENE
  ENSRNOT00000009123.6 UniProtKB/Swiss-Prot
  ENSRNOT00000105076.1 UniProtKB/TrEMBL
InterPro AKAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AKAP_28 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:60332 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 60332 ENTREZGENE
PANTHER A-KINASE ANCHOR PROTEIN 14 UniProtKB/Swiss-Prot
  A-KINASE ANCHOR PROTEIN 14 UniProtKB/Swiss-Prot
  A-KINASE ANCHOR PROTEIN 14 UniProtKB/TrEMBL
  A-KINASE ANCHOR PROTEIN 14 UniProtKB/TrEMBL
Pfam AKAP28 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Akap14 PhenoGen
RatGTEx ENSRNOG00000006899 RatGTEx
UniProt A0A8I6ANA3 ENTREZGENE, UniProtKB/TrEMBL
  A6JMH8 ENTREZGENE, UniProtKB/TrEMBL
  AKA14_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-25 Akap14  A-kinase anchoring protein 14  Akap14  A kinase (PRKA) anchor protein 14  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-07-08 Akap14  A kinase (PRKA) anchor protein 14  LOC60332  Testis-specific A-kinase-anchoring-protein  Symbol and Name updated 1299863 APPROVED