Insig1 (insulin induced gene 1) - Rat Genome Database

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Gene: Insig1 (insulin induced gene 1) Rattus norvegicus
Analyze
Symbol: Insig1
Name: insulin induced gene 1
RGD ID: 708457
Description: Predicted to enable oxysterol binding activity and protein sequestering activity. Involved in cellular response to insulin stimulus; response to estradiol; and response to fatty acid. Predicted to be part of SREBP-SCAP-Insig complex. Predicted to be active in endoplasmic reticulum membrane. Biomarker of steatotic liver disease. Orthologous to human INSIG1 (insulin induced gene 1); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; INTERACTS WITH (S)-nicotine; 1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine; 1-benzylpiperazine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: growth response protein (CL-6); immediate-early protein CL-6; INSIG-1; insulin-induced gene 1 protein; insulin-induced growth response protein CL-6; LOC64194
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr848,049,339 - 8,057,812 (-)NCBIGRCr8
mRatBN7.247,315,494 - 7,323,972 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl47,315,495 - 7,323,952 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx412,325,756 - 12,333,970 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.048,139,997 - 8,148,211 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.046,486,189 - 6,494,403 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04342,302 - 350,515 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4342,302 - 350,515 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04337,389 - 345,602 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.442,577,468 - 2,585,682 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.142,577,467 - 2,585,682 (-)NCBI
Celera42,956,778 - 2,964,992 (+)NCBICelera
Cytogenetic Map4q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(S)-nicotine  (EXP,ISO)
1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine  (EXP)
1-benzylpiperazine  (EXP)
1-naphthyl isothiocyanate  (EXP,ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
2-butoxyethanol  (ISO)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
25-hydroxycholesterol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP,ISO)
3,3',5-triiodo-L-thyronine  (EXP)
3-phenylprop-2-enal  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (EXP,ISO)
8-Br-cAMP  (ISO)
acetamide  (EXP)
acetylsalicylic acid  (EXP,ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
Alisol A  (EXP)
Alisol B  (EXP)
Alisol C 23-acetate  (EXP)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
amphotericin B  (ISO)
antimycin A  (ISO)
Archazolid B  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
atrazine  (EXP)
avobenzone  (ISO)
azoxystrobin  (ISO)
beauvericin  (ISO)
benzalkonium chloride  (ISO)
benzene  (EXP)
benzethonium chloride  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bexarotene  (EXP)
bezafibrate  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bleomycin A2  (ISO)
bromobenzene  (EXP)
bromuconazole  (EXP)
butan-1-ol  (ISO)
Butylbenzyl phthalate  (EXP)
butyric acid  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
cadmium sulfate  (ISO)
caffeine  (EXP)
calcitriol  (ISO)
cannabidiol  (ISO)
captan  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
carmustine  (ISO)
celastrol  (ISO)
chloroacetaldehyde  (ISO)
chloroethene  (ISO)
chromium(6+)  (ISO)
cidofovir anhydrous  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
clofibrate  (EXP)
cobalt dichloride  (EXP,ISO)
colforsin daropate hydrochloride  (ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crizotinib  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
cyproconazole  (ISO)
DDE  (ISO)
decabromodiphenyl ether  (EXP)
desmosterol  (ISO)
dexamethasone  (ISO)
Di-n-hexyl phthalate  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
Dicyclohexyl phthalate  (EXP)
diethylstilbestrol  (EXP)
diisobutyl phthalate  (EXP)
diisononyl phthalate  (EXP)
dimethyl-(phenylmethyl)-[2-[2-[4-(2,4,4-trimethylpentan-2-yl)phenoxy]ethoxy]ethyl]ammonium  (ISO)
dimethylarsinic acid  (ISO)
dimethylselenide  (ISO)
dioxygen  (ISO)
dipentyl phthalate  (EXP)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
etoposide  (ISO)
fenofibrate  (ISO)
fluoranthene  (ISO)
fluoxetine  (EXP,ISO)
flusilazole  (ISO)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
fructose  (ISO)
furan  (ISO)
Ganoderic acid A  (ISO)
gedunin  (ISO)
gemcitabine  (ISO)
genistein  (ISO)
gentamycin  (EXP)
GW 3965  (ISO)
GW 7647  (ISO)
hexaconazole  (ISO)
hydrogen peroxide  (ISO)
hydroxyl  (ISO)
ibuprofen  (ISO)
indole-3-methanol  (EXP)
irinotecan  (ISO)
iron dichloride  (ISO)
isobutanol  (ISO)
isoflavones  (ISO)
isotretinoin  (ISO)
ketoconazole  (EXP)
lead(II) chloride  (ISO)
leflunomide  (EXP)
linalool  (ISO)
lipopolysaccharide  (EXP,ISO)
lovastatin  (ISO)
maneb  (ISO)
manganese(II) chloride  (EXP)
mercury dibromide  (ISO)
metformin  (ISO)
methyl methanesulfonate  (ISO)
methylarsonic acid  (ISO)
methylmercury chloride  (ISO)
miconazole  (ISO)
microcystin-LR  (ISO)
N-acetyl-L-cysteine  (EXP)
N-ethyl-N-nitrosourea  (EXP)
N-methyl-4-phenylpyridinium  (EXP)
N-nitrosodiethylamine  (EXP)
N-nitrosomorpholine  (EXP)
N-Nitrosopyrrolidine  (ISO)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (EXP)
nefazodone  (EXP)
nickel atom  (ISO)
nicotine  (EXP,ISO)
nitrofen  (EXP)
O-methyleugenol  (ISO)
oxaliplatin  (EXP,ISO)
p-chloromercuribenzoic acid  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
phenformin  (EXP)
phenobarbital  (EXP,ISO)
phenylmercury acetate  (ISO)
PhIP  (EXP)
pirinixic acid  (EXP,ISO)
piroxicam  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (ISO)
propiconazole  (ISO)
quercetin 3-O-beta-D-glucofuranoside  (ISO)
quercetin 3-O-beta-D-glucopyranoside  (ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
ranitidine  (EXP)
resveratrol  (ISO)
rotenone  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
sarin  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sirolimus  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
starch  (EXP)
streptozocin  (ISO)
succimer  (ISO)
sulindac sulfide  (ISO)
sunitinib  (ISO)
T-2 toxin  (ISO)
tebuconazole  (ISO)
tebufenpyrad  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (EXP,ISO)
thapsigargin  (ISO)
thimerosal  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP,ISO)
triadimefon  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (EXP,ISO)
Triptolide  (ISO)
troglitazone  (EXP,ISO)
tunicamycin  (ISO)
uranium atom  (ISO)
valproic acid  (ISO)
vanadium atom  (ISO)
vanadium(0)  (ISO)
vancomycin  (ISO)
vandetanib  (ISO)
vanillin  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Central leptin regulates total ceramide content and sterol regulatory element binding protein-1C proteolytic maturation in rat white adipose tissue. Bonzon-Kulichenko E, etal., Endocrinology. 2009 Jan;150(1):169-78. Epub 2008 Sep 18.
2. Docosahexaneoic acid (22:6,n-3) regulates rat hepatocyte SREBP-1 nuclear abundance by Erk- and 26S proteasome-dependent pathways. Botolin D, etal., J Lipid Res. 2006 Jan;47(1):181-92. Epub 2005 Oct 12.
3. Novel delayed-early and highly insulin-induced growth response genes. Identification of HRS, a potential regulator of alternative pre-mRNA splicing. Diamond RH, etal., J Biol Chem 1993 Jul 15;268(20):15185-92.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Thermally oxidized oil increases the expression of insulin-induced genes and inhibits activation of sterol regulatory element-binding protein-2 in rat liver. Koch A, etal., J Nutr. 2007 Sep;137(9):2018-23.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. TFE3 transcriptionally activates hepatic IRS-2, participates in insulin signaling and ameliorates diabetes. Nakagawa Y, etal., Nat Med. 2006 Jan;12(1):107-13. Epub 2005 Dec 4.
8. Evolutionary conservation and adaptation in the mechanism that regulates SREBP action: what a long, strange tRIP it's been. Osborne TF and Espenshade PJ, Genes Dev. 2009 Nov 15;23(22):2578-91.
9. Regulation of Sterol Regulatory Element Binding Transcription Factor 1a by Human Chorionic Gonadotropin and Insulin in Cultured Rat Theca-Interstitial Cells. Palaniappan M and Menon KM, Biol Reprod. 2009 Mar 18.
10. GOA pipeline RGD automated data pipeline
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Comprehensive gene review and curation RGD comprehensive gene curation
13. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
14. Hepatic insig-1 or -2 overexpression reduces lipogenesis in obese Zucker diabetic fatty rats and in fasted/refed normal rats. Takaishi K, etal., Proc Natl Acad Sci U S A. 2004 May 4;101(18):7106-11. Epub 2004 Apr 19.
15. Gene expression profiling of the effects of castration and estrogen treatment in the rat uterus. Wu X, etal., Biol Reprod. 2003 Oct;69(4):1308-17. Epub 2003 Jun 11.
Additional References at PubMed
PMID:12202038   PMID:12242332   PMID:12869692   PMID:15489334   PMID:15682487   PMID:15899885   PMID:16100574   PMID:16955138   PMID:21843373   PMID:23913732   PMID:26007286  


Genomics

Comparative Map Data
Insig1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr848,049,339 - 8,057,812 (-)NCBIGRCr8
mRatBN7.247,315,494 - 7,323,972 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl47,315,495 - 7,323,952 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx412,325,756 - 12,333,970 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.048,139,997 - 8,148,211 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.046,486,189 - 6,494,403 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04342,302 - 350,515 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4342,302 - 350,515 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04337,389 - 345,602 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.442,577,468 - 2,585,682 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.142,577,467 - 2,585,682 (-)NCBI
Celera42,956,778 - 2,964,992 (+)NCBICelera
Cytogenetic Map4q11NCBI
INSIG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387155,297,878 - 155,310,235 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7155,297,776 - 155,310,235 (+)EnsemblGRCh38hg38GRCh38
GRCh377155,089,588 - 155,101,945 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367154,720,476 - 154,732,879 (+)NCBINCBI36Build 36hg18NCBI36
Build 347154,527,190 - 154,539,592NCBI
Celera7149,506,354 - 149,518,817 (+)NCBICelera
Cytogenetic Map7q36.3NCBI
HuRef7148,822,074 - 148,834,485 (+)NCBIHuRef
CHM1_17155,097,819 - 155,110,278 (+)NCBICHM1_1
T2T-CHM13v2.07156,473,431 - 156,485,788 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27154,316,806 - 154,329,270 (+)NCBI
Insig1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39528,276,410 - 28,283,660 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl528,276,361 - 28,283,660 (+)EnsemblGRCm39 Ensembl
GRCm38528,071,412 - 28,078,662 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl528,071,363 - 28,078,662 (+)EnsemblGRCm38mm10GRCm38
MGSCv37528,397,952 - 28,405,202 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36528,402,154 - 28,409,448 (+)NCBIMGSCv36mm8
Celera525,621,532 - 25,628,781 (+)NCBICelera
Cytogenetic Map5B1NCBI
cM Map513.94NCBI
Insig1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554918,335,359 - 8,344,658 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554918,333,624 - 8,344,658 (+)NCBIChiLan1.0ChiLan1.0
INSIG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26191,721,561 - 191,734,133 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1743,731,827 - 43,744,399 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07146,893,730 - 146,906,329 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17158,619,531 - 158,632,012 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7158,619,531 - 158,632,012 (+)Ensemblpanpan1.1panPan2
INSIG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11618,260,456 - 18,271,855 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1618,259,935 - 18,271,378 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1618,893,073 - 18,904,493 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01619,989,109 - 20,000,531 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1619,989,744 - 20,000,361 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11618,359,941 - 18,371,370 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01618,939,908 - 18,951,331 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01618,992,903 - 19,004,326 (+)NCBIUU_Cfam_GSD_1.0
Insig1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051183,206,479 - 3,219,125 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365279,685,695 - 9,692,830 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365279,684,304 - 9,696,951 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
INSIG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl182,885,612 - 2,898,767 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1182,885,494 - 2,898,758 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2182,896,505 - 3,019,640 (-)NCBISscrofa10.2Sscrofa10.2susScr3
INSIG1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121123,448,614 - 123,460,778 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21123,449,106 - 123,460,807 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607219,570,201 - 19,582,375 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Insig1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248002,534,967 - 2,543,075 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248002,533,010 - 2,543,754 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Insig1
14 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:172
Count of miRNA genes:137
Interacting mature miRNAs:147
Transcripts:ENSRNOT00000009233
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61408Scl23Serum cholesterol level QTL 230.0005blood HDL phospholipid amount (VT:0010504)serum high density lipoprotein phospholipid level (CMO:0001567)4127716890Rat
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829457114705Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
9589046Scfw2Subcutaneous fat weight QTL 25.540.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)4131934116Rat
8552903Pigfal2Plasma insulin-like growth factor 1 level QTL 27.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)4131934116Rat
724557Plsm1Polydactyly-luxate syndrome (PLS) morphotypes QTL 10.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)4127716890Rat
9590100Sffal4Serum free fatty acids level QTL 47.360.05blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)4131934116Rat
61351Bp33Blood pressure QTL 330.0018arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4127716890Rat
61415Eae11Experimental allergic encephalomyelitis QTL 112.9nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)4139505420Rat
1641905Colcr1Colorectal carcinoma resistance QTL 14.30.0003intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)4129494328Rat
1357341Gluco5Glucose level QTL 56.4adipocyte free fatty acid secretion trait (VT:0010465)absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446)4133250345Rat
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4521460278882945Rat
1357343Gluco4Glucose level QTL 40.00002adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874)4133250345Rat
1358201Gluco12Glucose level QTL121.6adipocyte glucose uptake trait (VT:0004185)adipocyte maximal glucose uptake (CMO:0000870)4521839229593287Rat
738021Hcar13Hepatocarcinoma resistance QTL 134.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)4132584199Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521829465958103Rat
631642Stl2Serum triglyceride level QTL 23.3blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4521917856647776Rat
61333Gluco16Glucose level QTL 164.30.00001adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)4130372989Rat
634323Hc2Hypercalciuria QTL 22.15urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)421079645210796Rat
9589097Slep11Serum leptin concentration QTL 115.090.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)4131934116Rat

Markers in Region
RH128057  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2467,328,991 - 67,329,187 (+)MAPPERmRatBN7.2
mRatBN7.247,315,900 - 7,316,096 (+)MAPPERmRatBN7.2
mRatBN7.247,315,900 - 7,316,096 (-)MAPPERmRatBN7.2
mRatBN7.2467,328,991 - 67,329,187 (-)MAPPERmRatBN7.2
Rnor_6.0466,334,547 - 66,334,742NCBIRnor6.0
Rnor_6.04350,130 - 350,325NCBIRnor6.0
Rnor_5.04345,217 - 345,412UniSTSRnor5.0
Rnor_5.0466,146,027 - 66,146,222UniSTSRnor5.0
RGSC_v3.4466,162,400 - 66,162,595UniSTSRGSC3.4
RGSC_v3.442,577,658 - 2,577,853UniSTSRGSC3.4
Celera42,964,607 - 2,964,802UniSTS
Celera462,346,611 - 62,346,806UniSTS
Cytogenetic Map4q11UniSTS
Cytogenetic Map4q22UniSTS
Insig1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2467,330,531 - 67,330,696 (+)MAPPERmRatBN7.2
Rnor_6.0466,336,087 - 66,336,251NCBIRnor6.0
Rnor_5.0466,147,567 - 66,147,731UniSTSRnor5.0
Celera462,348,155 - 62,348,319UniSTS
Cytogenetic Map4q11UniSTS
Cytogenetic Map4q22UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 21 141 227 147 69 147 36 45 250 115 145 57 24
Low
Below cutoff

Sequence


Ensembl Acc Id: ENSRNOT00000009233   ⟹   ENSRNOP00000009233
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl47,315,495 - 7,323,952 (-)Ensembl
Rnor_6.0 Ensembl4342,302 - 350,515 (+)Ensembl
RefSeq Acc Id: NM_022392   ⟹   NP_071787
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr848,049,555 - 8,057,769 (-)NCBI
mRatBN7.247,315,711 - 7,323,925 (-)NCBI
Rnor_6.04342,302 - 350,515 (+)NCBI
Rnor_5.04337,389 - 345,602 (+)NCBI
RGSC_v3.442,577,468 - 2,585,682 (-)RGD
Celera42,956,778 - 2,964,992 (+)RGD
Sequence:
RefSeq Acc Id: XM_039108310   ⟹   XP_038964238
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr848,049,339 - 8,057,088 (-)NCBI
mRatBN7.247,315,494 - 7,323,501 (-)NCBI
RefSeq Acc Id: XM_039108311   ⟹   XP_038964239
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr848,049,339 - 8,056,387 (-)NCBI
mRatBN7.247,315,494 - 7,323,490 (-)NCBI
RefSeq Acc Id: XM_063286658   ⟹   XP_063142728
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr848,053,368 - 8,057,810 (-)NCBI
RefSeq Acc Id: XM_063286659   ⟹   XP_063142729
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr848,054,481 - 8,057,812 (-)NCBI
RefSeq Acc Id: NP_071787   ⟸   NM_022392
- UniProtKB: Q08755 (UniProtKB/Swiss-Prot),   A6KJL1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000009233   ⟸   ENSRNOT00000009233
RefSeq Acc Id: XP_038964238   ⟸   XM_039108310
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038964239   ⟸   XM_039108311
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063142728   ⟸   XM_063286658
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063142729   ⟸   XM_063286659
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q08755-F1-model_v2 AlphaFold Q08755 1-259 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692769
Promoter ID:EPDNEW_R3292
Type:single initiation site
Name:Insig1_1
Description:insulin induced gene 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.04342,276 - 342,336EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:708457 AgrOrtholog
BioCyc Gene G2FUF-46136 BioCyc
Ensembl Genes ENSRNOG00000006859 Ensembl, UniProtKB/Swiss-Prot
  ENSRNOG00055005568 UniProtKB/Swiss-Prot
  ENSRNOG00060021414 UniProtKB/Swiss-Prot
  ENSRNOG00065004437 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000009233.7 UniProtKB/Swiss-Prot
  ENSRNOT00055008945 UniProtKB/Swiss-Prot
  ENSRNOT00060037076 UniProtKB/Swiss-Prot
  ENSRNOT00065006462 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7125208 IMAGE-MGC_LOAD
InterPro INSIG_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:64194 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:93442 IMAGE-MGC_LOAD
NCBI Gene 64194 ENTREZGENE
PANTHER INSULIN-INDUCED GENE 1 UniProtKB/TrEMBL
  INSULIN-INDUCED GENE 1 PROTEIN UniProtKB/TrEMBL
  PTHR15301 UniProtKB/Swiss-Prot
  PTHR15301:SF11 UniProtKB/Swiss-Prot
Pfam INSIG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Insig1 PhenoGen
RatGTEx ENSRNOG00000006859 RatGTEx
  ENSRNOG00055005568 RatGTEx
  ENSRNOG00060021414 RatGTEx
  ENSRNOG00065004437 RatGTEx
UniProt A6KJL1 ENTREZGENE, UniProtKB/TrEMBL
  INSI1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-04-22 Insig1  insulin induced gene 1  LOC64194  growth response protein (CL-6)  Symbol and Name updated to reflect Human and Mouse nomenclature 625702 APPROVED