Gene: Ubd (ubiquitin D) Rattus norvegicus
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Symbol: Ubd
Name: ubiquitin D
Description: ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN response to organonitrogen compound; aggresome assembly (ortholog); myeloid dendritic cell differentiation (ortholog); ASSOCIATED WITH Animal Hepatitis (ortholog); Breast Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); fibrillar center (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,3-dinitrobenzene; 1-chloro-2,4-dinitrobenzene
AGR Description: Predicted to have proteasome binding activity; involved in response to organonitrogen compound; predicted to localize to the aggresome, cytoplasm, and fibrillar center; orthologous to human UBD (ubiquitin D).
Merged Description: Predicted to have proteasome binding activity; involved in response to organonitrogen compound; predicted to localize to the aggresome, cytoplasm, and fibrillar center; orthologous to human UBD (ubiquitin D); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,3-dinitrobenzene; 1-chloro-2,4-dinitrobenzene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: diubiquitin; ubiquitin-like protein FAT10
Orthologs:
Homo sapiens (human) : UBD (ubiquitin D)  HGNC  Alliance
Mus musculus (house mouse) : Ubd (ubiquitin D)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ubd (ubiquitin D)
Pan paniscus (bonobo/pygmy chimpanzee) : UBD (ubiquitin D)
Canis lupus familiaris (dog) : UBD (ubiquitin D)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ubd (ubiquitin D)
Sus scrofa (pig) : UBD (ubiquitin D)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0201,876,175 - 1,878,126 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0203,917,777 - 3,919,728 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4201,475,944 - 1,477,895 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1201,475,953 - 1,477,895 (-)NCBI
Celera202,096,127 - 2,098,078 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ubd
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 69418
Created: 2001-11-27
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.