Cacna1g (calcium channel, voltage-dependent, T type, alpha 1G subunit) - Rat Genome Database

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Gene: Cacna1g (calcium channel, voltage-dependent, T type, alpha 1G subunit) Mus musculus
Analyze
Symbol: Cacna1g
Name: calcium channel, voltage-dependent, T type, alpha 1G subunit
RGD ID: 68990
MGI Page MGI
Description: Enables low voltage-gated calcium channel activity; voltage-gated calcium channel activity involved SA node cell action potential; and voltage-gated calcium channel activity involved in AV node cell action potential. Involved in calcium ion transmembrane transport; cardiac conduction; and cardiac muscle cell action potential involved in contraction. Acts upstream of or within several processes, including regulation of atrial cardiac muscle cell membrane depolarization; regulation of heart rate; and response to nickel cation. Located in plasma membrane. Part of voltage-gated calcium channel complex. Is expressed in central nervous system; heart; hindlimb musculature; lower jaw molar; and retina. Used to study cerebellar ataxia type 42. Human ortholog(s) of this gene implicated in cerebellar ataxia type 42. Orthologous to human CACNA1G (calcium voltage-gated channel subunit alpha1 G); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: [a]1G; a1; a1G; alpha-1G; Cav3.; Cav3.1d; mKIAA1123; voltage-dependent T-type calcium channel subunit alpha-1G
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391194,299,217 - 94,365,226 (-)NCBIGRCm39mm39
GRCm39 Ensembl1194,299,217 - 94,365,024 (-)Ensembl
GRCm381194,408,391 - 94,474,400 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1194,408,391 - 94,474,198 (-)EnsemblGRCm38mm10GRCm38
MGSCv371194,269,705 - 94,335,512 (-)NCBIGRCm37mm9NCBIm37
MGSCv361194,224,606 - 94,289,815 (-)NCBImm8
Celera11104,027,102 - 104,094,565 (-)NCBICelera
Cytogenetic Map11DNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-amphetamine  (ISO)
1,2-dichloroethane  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (EXP)
4,4'-sulfonyldiphenol  (EXP)
acrylamide  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
aflatoxin B2  (ISO)
allethrin  (ISO)
ammonium chloride  (ISO)
androgen antagonist  (ISO)
antirheumatic drug  (ISO)
aristolochic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
barium(0)  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
Butylparaben  (ISO)
C60 fullerene  (ISO)
cadmium dichloride  (EXP)
calcium atom  (EXP,ISO)
calcium(0)  (EXP,ISO)
cannabidiol  (ISO)
cerium  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
cisplatin  (ISO)
colforsin daropate hydrochloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
Cuprizon  (ISO)
daunorubicin  (ISO)
DDE  (ISO)
diazinon  (ISO)
dibutyl phthalate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
enzacamene  (ISO)
epoxiconazole  (ISO)
erbium  (ISO)
ethanol  (EXP)
fluoxetine  (ISO)
folic acid  (EXP)
gadolinium atom  (ISO)
genistein  (EXP)
holmium atom  (ISO)
indole-3-methanol  (ISO)
L-methionine  (EXP)
lanthanum atom  (ISO)
linuron  (ISO)
menadione  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
Mibefradil  (ISO)
mitoxantrone  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-acetyl-L-cysteine  (ISO)
N-nitrosodiethylamine  (ISO)
neodymium atom  (ISO)
nickel atom  (ISO)
p-menthan-3-ol  (ISO)
paracetamol  (ISO)
pentanal  (ISO)
permethrin  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
potassium dichromate  (EXP)
prochloraz  (ISO)
procymidone  (ISO)
progesterone  (ISO)
propanal  (ISO)
SB 203580  (ISO)
SB 431542  (ISO)
scandium atom  (ISO)
silicon dioxide  (ISO)
tamoxifen  (EXP)
telmisartan  (ISO)
titanium dioxide  (EXP)
toluene  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (EXP)
triptonide  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
ytterbium  (ISO)
yttrium atom  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway  (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bisoprolol pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway  (ISO)
calcium transport pathway  (ISO)
calcium/calcium-mediated signaling pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
ibutilide pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
mitogen activated protein kinase signaling pathway  (IEA)
nadolol pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
type 2 diabetes mellitus pathway  (IEA)
verapamil pharmacodynamics pathway  (ISO)

References

Additional References at PubMed
PMID:8889548   PMID:10087148   PMID:10349636   PMID:10692398   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11230107   PMID:11498049   PMID:11897840   PMID:12060068   PMID:12466851  
PMID:12477932   PMID:12761855   PMID:12900400   PMID:14526084   PMID:14691545   PMID:14988077   PMID:15175395   PMID:15601764   PMID:15677322   PMID:16141072   PMID:16141073   PMID:16282520  
PMID:16386702   PMID:16602821   PMID:16690884   PMID:16883604   PMID:16985003   PMID:17473172   PMID:17525593   PMID:17761775   PMID:18414012   PMID:18753322   PMID:19320717   PMID:19451696  
PMID:19480703   PMID:19617313   PMID:19657020   PMID:19920353   PMID:20371816   PMID:20435690   PMID:20457833   PMID:20498062   PMID:20547167   PMID:20547676   PMID:20682748   PMID:20685979  
PMID:20827487   PMID:21079360   PMID:21084288   PMID:21266775   PMID:21320888   PMID:21406960   PMID:21621520   PMID:21622683   PMID:21677750   PMID:21737792   PMID:21873635   PMID:22133878  
PMID:22808078   PMID:22886848   PMID:22933804   PMID:23093775   PMID:23356724   PMID:23436820   PMID:23743021   PMID:23868804   PMID:23884198   PMID:24277825   PMID:24282303   PMID:24285899  
PMID:24778262   PMID:24952961   PMID:24966091   PMID:25016616   PMID:25220810   PMID:25825486   PMID:26056284   PMID:26111648   PMID:26390982   PMID:26627919   PMID:26858455   PMID:27037192  
PMID:27112236   PMID:27208094   PMID:27353765   PMID:27425615   PMID:27641070   PMID:27725084   PMID:27766308   PMID:28093211   PMID:28438566   PMID:28556246   PMID:28806761   PMID:28858620  
PMID:29082441   PMID:29274077   PMID:29578032   PMID:29913145   PMID:30571684   PMID:30649917   PMID:30715245   PMID:30786075   PMID:31042060   PMID:31229688   PMID:31306714   PMID:31800012  
PMID:31910261   PMID:31919478   PMID:32492036   PMID:32672536   PMID:32675240   PMID:32675279   PMID:33144668   PMID:33299036   PMID:33397958  


Genomics

Comparative Map Data
Cacna1g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391194,299,217 - 94,365,226 (-)NCBIGRCm39mm39
GRCm39 Ensembl1194,299,217 - 94,365,024 (-)Ensembl
GRCm381194,408,391 - 94,474,400 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1194,408,391 - 94,474,198 (-)EnsemblGRCm38mm10GRCm38
MGSCv371194,269,705 - 94,335,512 (-)NCBIGRCm37mm9NCBIm37
MGSCv361194,224,606 - 94,289,815 (-)NCBImm8
Celera11104,027,102 - 104,094,565 (-)NCBICelera
Cytogenetic Map11DNCBI
CACNA1G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1750,560,715 - 50,627,474 (+)EnsemblGRCh38hg38GRCh38
GRCh381750,560,715 - 50,629,625 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371748,638,076 - 48,704,835 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361745,993,448 - 46,059,541 (+)NCBINCBI36hg18NCBI36
Build 341745,993,447 - 46,038,832NCBI
Celera1745,099,811 - 45,165,917 (+)NCBI
Cytogenetic Map17q21.33NCBI
HuRef1744,006,381 - 44,072,836 (+)NCBIHuRef
CHM1_11748,702,306 - 48,768,826 (+)NCBICHM1_1
Cacna1g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21079,354,998 - 79,422,960 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1079,355,008 - 79,422,752 (-)Ensembl
Rnor_6.01082,129,071 - 82,197,828 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1082,129,506 - 82,197,848 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01081,950,594 - 82,017,885 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41083,043,636 - 83,112,886 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11083,058,005 - 83,127,256 (-)NCBI
Celera1078,143,865 - 78,211,268 (-)NCBICelera
RH 3.4 Map10617.6RGD
Cytogenetic Map10q26NCBI
Cacna1g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545111,137,214 - 11,194,036 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545111,136,885 - 11,194,321 (-)NCBIChiLan1.0ChiLan1.0
LOC100983419
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11749,528,819 - 49,595,487 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1749,529,402 - 49,595,166 (+)Ensemblpanpan1.1panPan2
PanPan1.1 Ensembl1749,603,268 - 49,659,318 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01744,654,558 - 44,786,037 (+)NCBIMhudiblu_PPA_v0panPan3
CACNA1G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1926,481,148 - 26,544,511 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl926,481,652 - 26,544,845 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha925,874,088 - 25,937,055 (+)NCBI
ROS_Cfam_1.0927,275,576 - 27,338,562 (+)NCBI
UMICH_Zoey_3.1926,043,294 - 26,106,242 (+)NCBI
UNSW_CanFamBas_1.0926,301,905 - 26,364,906 (+)NCBI
UU_Cfam_GSD_1.0926,432,081 - 26,495,083 (+)NCBI
Cacna1g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560225,917,385 - 25,981,187 (+)NCBI
SpeTri2.0NW_00493649011,093,600 - 11,157,756 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CACNA1G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1226,844,079 - 26,912,054 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11226,838,633 - 26,912,344 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21226,991,543 - 27,052,231 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CACNA1G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11642,710,640 - 42,776,736 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1642,708,638 - 42,768,843 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607713,424,552 - 13,494,447 (-)NCBIVero_WHO_p1.0
Cacna1g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247956,443,322 - 6,501,673 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
Cacna1g  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11DUniSTS
cM Map11 UniSTS
CACNA1G-1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381194,418,055 - 94,418,901UniSTSGRCm38
MGSCv371194,279,369 - 94,280,215UniSTSGRCm37
Celera11104,036,804 - 104,037,650UniSTS
Cytogenetic Map11DUniSTS
Cacna1g  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11DUniSTS
Cacna1g  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11DUniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177546357111546496Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177546357111546496Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117768304799486994Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177880152111880273Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179265183107725646Mouse
14746970Manh71_mmandible shape 71 (mouse)1179525431113525431Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179922933104611872Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1181000000102000000Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181683655115683810Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181683655115683810Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181919441115919441Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182486872116486994Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185954085119954085Mouse
15039374Adip29_madiposity 29 (mouse)1186717494120717494Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186717494120717494Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186717494120717494Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187600000126900000Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187611774121611872Mouse
1357631Motr1_mmodifier of tubby retinal degeneration 1 (mouse)Not determined1187800372103383289Mouse
1301491Abbp4_mA/J and C57BL/6 blood pressure 4 (mouse)Not determined118880876299190771Mouse
1301313Pas5a_mpulmonary adenoma susceptibility 5a (mouse)Not determined118907597898974942Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189978425122082543Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191713782122082543Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191713782122082543Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1193048547112653728Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193338357122082543Mouse
1300847Par1_mpulmonary adenoma resistance 1 (mouse)Not determined119417295396276595Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194172953118131898Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194300000119000000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4145
Count of miRNA genes:601
Interacting mature miRNAs:753
Transcripts:ENSMUST00000021234, ENSMUST00000100561, ENSMUST00000103166, ENSMUST00000107785, ENSMUST00000107786, ENSMUST00000107788, ENSMUST00000107789, ENSMUST00000107790, ENSMUST00000107791, ENSMUST00000107792, ENSMUST00000107793, ENSMUST00000133000, ENSMUST00000133331, ENSMUST00000142190, ENSMUST00000146160, ENSMUST00000152811
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001112813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001177888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001177890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_388338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_388339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF227530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ012569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL645965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW124914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW457316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB491308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU708898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF536661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN667053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ317412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000021234   ⟹   ENSMUSP00000021234
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,232 - 94,365,024 (-)Ensembl
GRCm38.p6 Ensembl1194,408,406 - 94,474,198 (-)Ensembl
RefSeq Acc Id: ENSMUST00000100561   ⟹   ENSMUSP00000098127
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000103166   ⟹   ENSMUSP00000099455
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107785   ⟹   ENSMUSP00000103414
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,462 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,636 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107786   ⟹   ENSMUSP00000103415
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107788   ⟹   ENSMUSP00000103417
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107789   ⟹   ENSMUSP00000103418
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107790   ⟹   ENSMUSP00000103419
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107791   ⟹   ENSMUSP00000103420
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107792   ⟹   ENSMUSP00000103421
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107793   ⟹   ENSMUSP00000103422
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,299,217 - 94,364,926 (-)Ensembl
GRCm38.p6 Ensembl1194,408,391 - 94,474,100 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,316,066 - 94,317,288 (-)Ensembl
GRCm38.p6 Ensembl1194,425,240 - 94,426,462 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133331
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,300,680 - 94,302,505 (-)Ensembl
GRCm38.p6 Ensembl1194,409,854 - 94,411,679 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142190
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,309,673 - 94,315,169 (-)Ensembl
GRCm38.p6 Ensembl1194,418,847 - 94,424,343 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146160
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,302,307 - 94,308,013 (-)Ensembl
GRCm38.p6 Ensembl1194,411,481 - 94,417,187 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152811
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1194,317,778 - 94,364,467 (-)Ensembl
GRCm38.p6 Ensembl1194,426,952 - 94,473,641 (-)Ensembl
RefSeq Acc Id: NM_001112813   ⟹   NP_001106284
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,217 - 94,365,024 (-)NCBI
GRCm381194,408,391 - 94,474,198 (-)NCBI
MGSCv371194,269,705 - 94,335,512 (-)RGD
Celera11104,027,102 - 104,094,565 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001177888   ⟹   NP_001171359
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,217 - 94,365,024 (-)NCBI
GRCm381194,408,391 - 94,474,198 (-)NCBI
MGSCv371194,269,705 - 94,335,512 (-)RGD
Celera11104,027,102 - 104,094,565 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001177890   ⟹   NP_001171361
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,217 - 94,365,024 (-)NCBI
GRCm381194,408,391 - 94,474,198 (-)NCBI
MGSCv371194,269,705 - 94,335,512 (-)RGD
Celera11104,027,102 - 104,094,565 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009783   ⟹   NP_033913
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,217 - 94,365,024 (-)NCBI
GRCm381194,408,391 - 94,474,198 (-)NCBI
MGSCv371194,269,705 - 94,335,512 (-)RGD
Celera11104,027,102 - 104,094,565 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532069   ⟹   XP_006532132
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532070   ⟹   XP_006532133
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532072   ⟹   XP_006532135
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,748 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532073   ⟹   XP_006532136
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532074   ⟹   XP_006532137
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532075   ⟹   XP_006532138
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532076   ⟹   XP_006532139
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,748 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532079   ⟹   XP_006532142
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532080   ⟹   XP_006532143
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532081   ⟹   XP_006532144
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532082   ⟹   XP_006532145
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532083   ⟹   XP_006532146
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532084   ⟹   XP_006532147
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,748 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532085   ⟹   XP_006532148
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532086   ⟹   XP_006532149
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532087   ⟹   XP_006532150
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,748 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532088   ⟹   XP_006532151
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248686   ⟹   XP_011246988
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248687   ⟹   XP_011246989
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248688   ⟹   XP_011246990
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,215 (-)NCBI
GRCm381194,408,801 - 94,474,389 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248689   ⟹   XP_011246991
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,748 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248690   ⟹   XP_011246992
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248691   ⟹   XP_011246993
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248692   ⟹   XP_011246994
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248693   ⟹   XP_011246995
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248694   ⟹   XP_011246996
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248695   ⟹   XP_011246997
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,748 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248696   ⟹   XP_011246998
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,748 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248697   ⟹   XP_011246999
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248698   ⟹   XP_011247000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248699   ⟹   XP_011247001
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,314,698 - 94,365,226 (-)NCBI
GRCm381194,423,778 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248700   ⟹   XP_011247002
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,314,698 - 94,365,226 (-)NCBI
GRCm381194,423,778 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314234   ⟹   XP_017169723
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,609 - 94,365,226 (-)NCBI
GRCm381194,408,748 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314235   ⟹   XP_017169724
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,347,337 (-)NCBI
GRCm381194,408,801 - 94,456,516 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245496   ⟹   XP_030101356
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245497   ⟹   XP_030101357
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,215 (-)NCBI
GRCm381194,408,801 - 94,474,389 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156254   ⟹   XP_036012147
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
RefSeq Acc Id: XR_003949260
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003949261
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,300,370 - 94,365,226 (-)NCBI
GRCm381194,409,544 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XR_388338
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XR_388339
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879510
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391194,299,627 - 94,365,226 (-)NCBI
GRCm381194,408,801 - 94,474,400 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001106284 (Get FASTA)   NCBI Sequence Viewer  
  NP_001171359 (Get FASTA)   NCBI Sequence Viewer  
  NP_001171361 (Get FASTA)   NCBI Sequence Viewer  
  NP_033913 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532132 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532133 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532135 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532136 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532137 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532138 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532139 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532142 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532143 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532144 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532145 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532146 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532147 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532148 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532149 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532150 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532151 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246988 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246989 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246990 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246991 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246992 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246993 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246994 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246995 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246996 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246997 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246998 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246999 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247000 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247001 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247002 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169723 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169724 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101356 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101357 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012147 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF60165 (Get FASTA)   NCBI Sequence Viewer  
  AAH57399 (Get FASTA)   NCBI Sequence Viewer  
  ABC47034 (Get FASTA)   NCBI Sequence Viewer  
  BAC98104 (Get FASTA)   NCBI Sequence Viewer  
  BAE25073 (Get FASTA)   NCBI Sequence Viewer  
  CAB40793 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_033913   ⟸   NM_009783
- Peptide Label: isoform a
- UniProtKB: Q27YN9 (UniProtKB/TrEMBL),   Q5SUG4 (UniProtKB/TrEMBL),   Q9WUT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001106284   ⟸   NM_001112813
- Peptide Label: isoform b
- UniProtKB: E9PWL1 (UniProtKB/TrEMBL),   Q27YN9 (UniProtKB/TrEMBL),   Q9WUT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001171359   ⟸   NM_001177888
- Peptide Label: isoform c
- UniProtKB: Q5SUF9 (UniProtKB/TrEMBL),   Q6PFV8 (UniProtKB/TrEMBL),   Q9WUT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001171361   ⟸   NM_001177890
- Peptide Label: isoform d
- UniProtKB: Q5SUG1 (UniProtKB/TrEMBL),   Q6PFV8 (UniProtKB/TrEMBL),   Q6ZPX4 (UniProtKB/TrEMBL),   Q9WUT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532151   ⟸   XM_006532088
- Peptide Label: isoform X33
- UniProtKB: Q5SUF5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532145   ⟸   XM_006532082
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_006532138   ⟸   XM_006532075
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_006532150   ⟸   XM_006532087
- Peptide Label: isoform X32
- UniProtKB: Q5SUF8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532146   ⟸   XM_006532083
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_006532139   ⟸   XM_006532076
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_006532136   ⟸   XM_006532073
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006532149   ⟸   XM_006532086
- Peptide Label: isoform X30
- UniProtKB: Q5SUG3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532144   ⟸   XM_006532081
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_006532137   ⟸   XM_006532074
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006532147   ⟸   XM_006532084
- Peptide Label: isoform X26
- UniProtKB: Q5SUF6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532142   ⟸   XM_006532079
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_006532133   ⟸   XM_006532070
- Peptide Label: isoform X4
- UniProtKB: Q5SUF7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532148   ⟸   XM_006532085
- Peptide Label: isoform X28
- UniProtKB: Q5SUG0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532143   ⟸   XM_006532080
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_006532135   ⟸   XM_006532072
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006532132   ⟸   XM_006532069
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011246990   ⟸   XM_011248688
- Peptide Label: isoform X5
- Sequence: