Eef1a1 (eukaryotic translation elongation factor 1 alpha 1) - Rat Genome Database
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Gene: Eef1a1 (eukaryotic translation elongation factor 1 alpha 1) Mus musculus
Analyze
Symbol: Eef1a1
Name: eukaryotic translation elongation factor 1 alpha 1
RGD ID: 68967
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and liver and biliary system. Orthologous to human EEF1A1 (eukaryotic translation elongation factor 1 alpha 1); PARTICIPATES IN chaperone mediated autophagy pathway; translation elongation pathway; INTERACTS WITH 1,2-dimethylhydrazine; 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine; 2,2',4,4',5,5'-hexachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: eEF1A-1; EF-1-alpha-1; EF-Tu; elongation factor 1 A-1; elongation factor 1-alpha 1; elongation factor Tu; eukaryotic elongation factor 1 A-1; MGC102592; MGC103271; MGC118397; MGC18758; MGC27859; MGC7551; MGC8115; MGC8209
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Eef1a1-ps1   Eef1a1-ps2   Gm12912   Gm13456   Gm14908   Gm19024   Gm19027   Gm19029   Gm19033   Gm19038   Gm19045   Gm19050   Gm19051   Gm19054   Gm2452   Gm4977   Gm5822   Gm5869   Gm6170   Gm6192   Gm6392   Gm6548   Gm6767   Gm6789   Gm6991   Gm7105   Gm8403   Gm9521  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39978,385,735 - 78,389,006 (-)NCBIGRCm39mm39
GRCm39 Ensembl978,385,731 - 78,396,433 (-)Ensembl
GRCm38978,478,453 - 78,481,724 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl978,478,449 - 78,489,151 (-)EnsemblGRCm38mm10GRCm38
MGSCv37978,326,260 - 78,329,531 (-)NCBIGRCm37mm9NCBIm37
MGSCv36978,264,142 - 78,267,384 (-)NCBImm8
Celera975,657,008 - 75,660,279 (-)NCBICelera
Cytogenetic Map9E1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(Z)-3-butylidenephthalide  (ISO)
1,2-dimethylhydrazine  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrobenzenesulfonic acid  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
5-azacytidine  (ISO)
5-fluorouracil  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP,ISO)
abiraterone  (EXP)
acetamide  (ISO)
acetic acid  (EXP)
acetylsalicylic acid  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
all-trans-retinol  (ISO)
alpha-pinene  (ISO)
Aroclor 1254  (EXP)
arsenous acid  (ISO)
belinostat  (EXP)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
bleomycin A2  (EXP)
bromochloroacetic acid  (EXP)
bucladesine  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (EXP,ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
chloropicrin  (ISO)
choline  (EXP)
cisplatin  (EXP)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
decabromodiphenyl ether  (EXP)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dihydroartemisinin  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
diuron  (ISO)
dopamine  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
entinostat  (EXP)
ethanol  (EXP,ISO)
fenbuconazole  (ISO)
ferric oxide  (EXP)
flavonoids  (ISO)
folic acid  (EXP)
gamma-hexachlorocyclohexane  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glucose  (ISO)
glyphosate  (EXP)
graphite  (ISO)
indometacin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
lead(2+)  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
maneb  (EXP)
medroxyprogesterone acetate  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
miconazole  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosomorpholine  (ISO)
nitric oxide  (EXP)
ochratoxin A  (ISO)
ozone  (ISO)
p-menthan-3-ol  (ISO)
paracetamol  (EXP)
paraquat  (EXP)
PCB138  (ISO)
PhIP  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
potassium chromate  (ISO)
prostaglandin A1  (EXP)
rac-lactic acid  (ISO)
resveratrol  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (EXP)
sunitinib  (ISO)
SWINHOLIDE A  (ISO)
tamibarotene  (ISO)
tamoxifen  (ISO)
tetrachloroethene  (EXP)
tetrahydropalmatine  (ISO)
titanium dioxide  (EXP)
triadimefon  (EXP)
tributylstannane  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triphenylstannane  (ISO)
uranium atom  (ISO)
valproic acid  (EXP,ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:2569467   PMID:2911475   PMID:3215517   PMID:3512269   PMID:3960725   PMID:6203745   PMID:6383821   PMID:8308006   PMID:8631027   PMID:10349636   PMID:10725249   PMID:10922068  
PMID:11042159   PMID:11076861   PMID:11294870   PMID:12477932   PMID:12520002   PMID:12646217   PMID:12904583   PMID:14595844   PMID:14610273   PMID:15013623   PMID:15135218   PMID:15489334  
PMID:15703188   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16196101   PMID:16512683   PMID:16602821   PMID:16888816   PMID:16944949   PMID:16959763   PMID:16984773   PMID:17082189  
PMID:17124247   PMID:17309103   PMID:17634366   PMID:17967808   PMID:18079119   PMID:18307411   PMID:18649364   PMID:18799693   PMID:18820646   PMID:19015237   PMID:19015242   PMID:19136429  
PMID:19174523   PMID:19536265   PMID:19723774   PMID:19856081   PMID:20114047   PMID:21267068   PMID:21562564   PMID:21565611   PMID:21689717   PMID:21816178   PMID:21873635   PMID:22237151  
PMID:22673621   PMID:23144817   PMID:23359070   PMID:23665319   PMID:23791182   PMID:24051438   PMID:24093682   PMID:24457600   PMID:24599258   PMID:25157170   PMID:25196998   PMID:25233275  
PMID:25303526   PMID:25306215   PMID:25737280   PMID:25809849   PMID:26058075   PMID:26102086   PMID:26119937   PMID:26336360   PMID:26370502   PMID:26426291   PMID:26496610   PMID:26581985  
PMID:26585400   PMID:26590968   PMID:26655697   PMID:27125305   PMID:27746211   PMID:28378742   PMID:28671696   PMID:28705898   PMID:28735749   PMID:29330353   PMID:29353861   PMID:29459677  
PMID:30038282   PMID:30068389   PMID:30333137   PMID:30562941   PMID:30595499   PMID:30642949   PMID:30713523   PMID:31350310   PMID:31451907   PMID:31501571   PMID:32325033   PMID:32647127  
PMID:32879487   PMID:32999463  


Genomics

Comparative Map Data
Eef1a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39978,385,735 - 78,389,006 (-)NCBIGRCm39mm39
GRCm39 Ensembl978,385,731 - 78,396,433 (-)Ensembl
GRCm38978,478,453 - 78,481,724 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl978,478,449 - 78,489,151 (-)EnsemblGRCm38mm10GRCm38
MGSCv37978,326,260 - 78,329,531 (-)NCBIGRCm37mm9NCBIm37
MGSCv36978,264,142 - 78,267,384 (-)NCBImm8
Celera975,657,008 - 75,660,279 (-)NCBICelera
Cytogenetic Map9E1NCBI
EEF1A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl673,515,750 - 73,523,797 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl673,489,308 - 73,525,587 (-)EnsemblGRCh38hg38GRCh38
GRCh38673,515,750 - 73,521,032 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37674,225,473 - 74,230,755 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36674,282,194 - 74,287,476 (-)NCBINCBI36hg18NCBI36
Build 34674,283,961 - 74,287,475NCBI
Celera674,620,376 - 74,625,658 (-)NCBI
Cytogenetic Map6q13NCBI
HuRef671,425,023 - 71,430,305 (-)NCBIHuRef
CHM1_1674,392,278 - 74,397,560 (-)NCBICHM1_1
Eef1a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2879,341,554 - 79,344,784 (-)NCBI
Rnor_6.0 Ensembl885,838,869 - 85,840,818 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0885,838,594 - 85,841,816 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0885,385,250 - 85,391,583 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4883,463,591 - 83,466,813 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1883,482,914 - 83,484,874 (-)NCBI
Celera879,087,667 - 79,090,889 (-)NCBICelera
Cytogenetic Map8q31NCBI
Eef1a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554938,661,317 - 8,663,190 (-)NCBIChiLan1.0ChiLan1.0
EEF1A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1674,629,688 - 74,634,018 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl674,629,688 - 74,633,754 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0671,342,291 - 71,346,033 (-)NCBIMhudiblu_PPA_v0panPan3
EEF1A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1235,576,576 - 35,581,230 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11235,576,576 - 35,581,339 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Eef1a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936859740,620 - 744,534 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EEF1A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl192,421,005 - 92,488,565 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1192,421,235 - 92,425,053 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21103,474,147 - 103,477,893 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EEF1A1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1171,626,701 - 1,630,445 (+)NCBI
ChlSab1.1 Ensembl171,627,901 - 1,630,150 (+)Ensembl
Eef1a1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624819732,118 - 735,391 (-)NCBI

Position Markers
Eef1a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38978,478,573 - 78,478,702UniSTSGRCm38
MGSCv37978,326,380 - 78,326,509UniSTSGRCm37
Celera975,657,128 - 75,657,257UniSTS
Cytogenetic Map9E1UniSTS
cM MapUN UniSTS
cM Map9 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93739490198819654Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94452089278520980Mouse
1300716Cd4ts4_mCD4 T cell subset 4 (mouse)Not determined94892377482923895Mouse
1300563Pgia5_mproteoglycan induced arthritis 5 (mouse)Not determined94892377482923895Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49541121101528921Mouse
14746993Manh66_mmandible shape 66 (mouse)94990676683906766Mouse
1301184Bdln4_mbody length 4 (mouse)Not determined95024403884244166Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95212317899910428Mouse
12790990Tgl7_mtriglyceride 7 (mouse)95465267888652678Mouse
10043877Adip21_madiposity 21 (mouse)Not determined95653182690531973Mouse
4141676Neogq1_mneonatal growth QTL 1 (mouse)Not determined95789776486239920Mouse
1301172Fembrs6_mfemur breaking strength 6 (mouse)Not determined95911710593117252Mouse
1301803Stheal9_msoft tissue heal 9 (mouse)Not determined95911710593117252Mouse
5491195Mobq8_mmultigenic obesity QTL 8 (mouse)Not determined95946266493462846Mouse
1300848Skull13_mskull morphology 13 (mouse)Not determined95946266493462846Mouse
1301456Adip5_madiposity 5 (mouse)Not determined95946266493462846Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
1301611Lrnx3_mlearning contextual 3 (mouse)Not determined96224248596242599Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
11081165Psl6_mpromotion susceptibility QTL 6 (mouse)96513390995640755Mouse
1301290Smgd1_msubmucosal gland distribution 1 (mouse)Not determined96592377486695914Mouse
1301636Lith5_mlithogenic gene 5 (mouse)Not determined966207024100207122Mouse
10045638Heal29_mwound healing/regeneration 29 (mouse)Not determined967124167101124167Mouse
1357610Vtbt8_mvertebral trabecular bone trait 8 (mouse)Not determined968897510102897652Mouse
1301924Bmd10_mbone mineral density 10 (mouse)Not determined968897510102897652Mouse
1301302Pas4_mpulmonary adenoma susceptibility 4 (mouse)Not determined969239845103239920Mouse
10412174Habiir4_mhyperoxic acute lung injury imprinted region 4 (mouse)Not determined96936046598819654Mouse
1301621Hpic1_mhaloperidol-induced catalepsy 1 (mouse)Not determined969546513103546645Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972977005106977152Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972977005106977152Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1301914Ksc1_mkeratinocyte stem cell locus 1 (mouse)Not determined97550175580091050Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301869Tbbmd4_mtotal body bone mineral density 4 (mouse)Not determined976117105101528921Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:509
Count of miRNA genes:379
Interacting mature miRNAs:413
Transcripts:ENSMUST00000042235, ENSMUST00000126614, ENSMUST00000129380, ENSMUST00000143570, ENSMUST00000144523, ENSMUST00000150960, ENSMUST00000154207, ENSMUST00000156988
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC158987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC083069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC095965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC099609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC108391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY227095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF437368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M22432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X03688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X13661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000042235   ⟹   ENSMUSP00000042457
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl978,478,449 - 78,481,724 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126614
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl978,479,665 - 78,480,688 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129380
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl978,478,684 - 78,479,716 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143570
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl978,478,912 - 78,479,501 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144523
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl978,479,278 - 78,480,688 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150960
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl978,479,480 - 78,480,499 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154207   ⟹   ENSMUSP00000120438
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl978,479,649 - 78,489,151 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156988   ⟹   ENSMUSP00000116821
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl978,479,915 - 78,480,841 (-)Ensembl
RefSeq Acc Id: NM_010106   ⟹   NP_034236
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39978,385,735 - 78,389,006 (-)NCBI
GRCm38978,478,453 - 78,481,724 (-)ENTREZGENE
MGSCv37978,326,260 - 78,329,531 (-)RGD
Celera975,657,008 - 75,660,279 (-)NCBI
cM Map9 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_034236 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA50406 (Get FASTA)   NCBI Sequence Viewer  
  AAH04005 (Get FASTA)   NCBI Sequence Viewer  
  AAH04067 (Get FASTA)   NCBI Sequence Viewer  
  AAH05660 (Get FASTA)   NCBI Sequence Viewer  
  AAH18223 (Get FASTA)   NCBI Sequence Viewer  
  AAH18485 (Get FASTA)   NCBI Sequence Viewer  
  AAH83069 (Get FASTA)   NCBI Sequence Viewer  
  AAH92053 (Get FASTA)   NCBI Sequence Viewer  
  AAH92276 (Get FASTA)   NCBI Sequence Viewer  
  AAH95965 (Get FASTA)   NCBI Sequence Viewer  
  AAH99609 (Get FASTA)   NCBI Sequence Viewer  
  AAI08392 (Get FASTA)   NCBI Sequence Viewer  
  BAC28085 (Get FASTA)   NCBI Sequence Viewer  
  BAC36446 (Get FASTA)   NCBI Sequence Viewer  
  BAC38311 (Get FASTA)   NCBI Sequence Viewer  
  BAC38884 (Get FASTA)   NCBI Sequence Viewer  
  BAE21802 (Get FASTA)   NCBI Sequence Viewer  
  BAE22537 (Get FASTA)   NCBI Sequence Viewer  
  BAE23278 (Get FASTA)   NCBI Sequence Viewer  
  BAE29861 (Get FASTA)   NCBI Sequence Viewer  
  BAE30434 (Get FASTA)   NCBI Sequence Viewer  
  BAE30679 (Get FASTA)   NCBI Sequence Viewer  
  BAE31515 (Get FASTA)   NCBI Sequence Viewer  
  BAE31951 (Get FASTA)   NCBI Sequence Viewer  
  BAE31962 (Get FASTA)   NCBI Sequence Viewer  
  BAE36697 (Get FASTA)   NCBI Sequence Viewer  
  BAE36848 (Get FASTA)   NCBI Sequence Viewer  
  BAE36918 (Get FASTA)   NCBI Sequence Viewer  
  BAE37497 (Get FASTA)   NCBI Sequence Viewer  
  BAE37633 (Get FASTA)   NCBI Sequence Viewer  
  BAE37870 (Get FASTA)   NCBI Sequence Viewer  
  BAE38472 (Get FASTA)   NCBI Sequence Viewer  
  BAE38526 (Get FASTA)   NCBI Sequence Viewer  
  BAE38534 (Get FASTA)   NCBI Sequence Viewer  
  BAE38549 (Get FASTA)   NCBI Sequence Viewer  
  BAE38564 (Get FASTA)   NCBI Sequence Viewer  
  BAE38895 (Get FASTA)   NCBI Sequence Viewer  
  BAE39035 (Get FASTA)   NCBI Sequence Viewer  
  BAE39863 (Get FASTA)   NCBI Sequence Viewer  
  CAA27324 (Get FASTA)   NCBI Sequence Viewer  
  CAA31957 (Get FASTA)   NCBI Sequence Viewer  
  EDL26400 (Get FASTA)   NCBI Sequence Viewer  
  P10126 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_034236   ⟸   NM_010106
- UniProtKB: P10126 (UniProtKB/Swiss-Prot),   Q58E64 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000120438   ⟸   ENSMUST00000154207
RefSeq Acc Id: ENSMUSP00000042457   ⟸   ENSMUST00000042235
RefSeq Acc Id: ENSMUSP00000116821   ⟸   ENSMUST00000156988
Protein Domains
GTP_EFTU_D3   tr-type G

Promoters
RGD ID:6844471
Promoter ID:MM_KWN:58170
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000116862,   OTTMUST00000047140,   OTTMUST00000047141,   OTTMUST00000047142,   OTTMUST00000047143,   OTTMUST00000047145
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36978,327,096 - 78,329,442 (-)MPROMDB
RGD ID:6844454
Promoter ID:MM_KWN:58171
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000047139
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36978,329,451 - 78,330,047 (-)MPROMDB
RGD ID:6844456
Promoter ID:MM_KWN:58172
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Liver,   MEF_B6
Transcripts:OTTMUST00000047146
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36978,336,636 - 78,337,136 (-)MPROMDB
RGD ID:8670280
Promoter ID:EPDNEW_M13170
Type:multiple initiation site
Name:Eef1a1_1
Description:Mus musculus eukaryotic translation elongation factor 1 alpha1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38978,481,671 - 78,481,731EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1096881 AgrOrtholog
Ensembl Genes ENSMUSG00000037742 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000042457 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000116821 UniProtKB/TrEMBL
  ENSMUSP00000120438 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000042235 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000154207 UniProtKB/TrEMBL
  ENSMUST00000156988 UniProtKB/TrEMBL
InterPro EFTu-like_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_TR_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TF_GTP-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transl_B-barrel_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transl_elong_EF1A/Init_IF2_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transl_elong_EF1A_euk/arc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transl_elong_EFTu/EF1A_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:13627 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1096881 ENTREZGENE
NCBI Gene 13627 ENTREZGENE
Pfam GTP_EFTU UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GTP_EFTU_D2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GTP_EFTU_D3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Eef1a1 PhenoGen
PRINTS ELONGATNFCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_TR_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_TR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50447 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50465 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs EF-1_alpha UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YZ68_MOUSE UniProtKB/TrEMBL
  D3Z3I8_MOUSE UniProtKB/TrEMBL
  EF1A1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TII3_MOUSE UniProtKB/TrEMBL
  Q3UA81_MOUSE UniProtKB/TrEMBL
  Q3UZQ3_MOUSE UniProtKB/TrEMBL
  Q4FZE5_MOUSE UniProtKB/TrEMBL
  Q58E64 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q61511 UniProtKB/Swiss-Prot
  Q6ZWN2 UniProtKB/Swiss-Prot
  Q8BMB8 UniProtKB/Swiss-Prot
  Q8BVS8 UniProtKB/Swiss-Prot
  Q99KU5 UniProtKB/Swiss-Prot