INPP4A (inositol polyphosphate-4-phosphatase type I A) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: INPP4A (inositol polyphosphate-4-phosphatase type I A) Homo sapiens
Analyze
Symbol: INPP4A
Name: inositol polyphosphate-4-phosphatase type I A
RGD ID: 68560
HGNC Page HGNC:6074
Description: Predicted to enable phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity. Predicted to be involved in inositol phosphate metabolic process; phosphatidylinositol biosynthetic process; and signal transduction. Located in cytoplasm; nuclear membrane; and nucleoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: inositol polyphosphate 4-phosphatase type I; inositol polyphosphate-4-phosphatase, type 1; inositol polyphosphate-4-phosphatase, type I, 107kD; inositol polyphosphate-4-phosphatase, type I, 107kDa; INPP4; TVAS1; type I inositol 3,4-bisphosphate 4-phosphatase; type I inositol-3,4-bisphosphate 4-phosphatase
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38298,444,587 - 98,594,392 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl298,444,854 - 98,594,392 (+)EnsemblGRCh38hg38GRCh38
GRCh37299,061,050 - 99,210,855 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36298,501,857 - 98,570,614 (+)NCBINCBI36Build 36hg18NCBI36
Build 34298,519,930 - 98,662,684NCBI
Celera293,265,040 - 93,411,219 (+)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef292,826,490 - 92,972,083 (+)NCBIHuRef
CHM1_1299,065,634 - 99,211,815 (+)NCBICHM1_1
T2T-CHM13v2.0298,902,886 - 99,052,718 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. The isolation and characterization of cDNA encoding human and rat brain inositol polyphosphate 4-phosphatase. Norris FA, etal., J Biol Chem 1995 Jul 7;270(27):16128-33.
3. The cDNA cloning and characterization of inositol polyphosphate 4-phosphatase type II. Evidence for conserved alternative splicing in the 4-phosphatase family. Norris FA, etal., J Biol Chem 1997 Sep 19;272(38):23859-64.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9110986   PMID:9599410   PMID:10097090   PMID:10702694   PMID:11485317   PMID:12477932   PMID:14702039   PMID:15231748   PMID:15489334   PMID:15716355   PMID:15815621   PMID:18187694  
PMID:18562305   PMID:19264973   PMID:20463662   PMID:21873635   PMID:23092984   PMID:23463506   PMID:25338135   PMID:25869668   PMID:25921289   PMID:26344197   PMID:26463840   PMID:28514442  
PMID:28611215   PMID:29507755   PMID:30071275   PMID:30335467   PMID:31253590   PMID:31524145   PMID:31978615   PMID:32457219   PMID:32694731   PMID:33109548   PMID:33961781   PMID:35256949  
PMID:35563538   PMID:36215168   PMID:38363325  


Genomics

Comparative Map Data
INPP4A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38298,444,587 - 98,594,392 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl298,444,854 - 98,594,392 (+)EnsemblGRCh38hg38GRCh38
GRCh37299,061,050 - 99,210,855 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36298,501,857 - 98,570,614 (+)NCBINCBI36Build 36hg18NCBI36
Build 34298,519,930 - 98,662,684NCBI
Celera293,265,040 - 93,411,219 (+)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef292,826,490 - 92,972,083 (+)NCBIHuRef
CHM1_1299,065,634 - 99,211,815 (+)NCBICHM1_1
T2T-CHM13v2.0298,902,886 - 99,052,718 (+)NCBIT2T-CHM13v2.0
Inpp4a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39137,338,908 - 37,449,821 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl137,338,946 - 37,449,817 (+)EnsemblGRCm39 Ensembl
GRCm38137,299,827 - 37,410,740 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl137,299,865 - 37,410,736 (+)EnsemblGRCm38mm10GRCm38
MGSCv37137,356,738 - 37,467,581 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36137,302,465 - 37,352,805 (+)NCBIMGSCv36mm8
Celera137,079,390 - 37,192,754 (+)NCBICelera
Cytogenetic Map1BNCBI
cM Map115.46NCBI
Inpp4a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8947,024,064 - 47,142,391 (+)NCBIGRCr8
mRatBN7.2939,528,245 - 39,650,574 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl939,528,674 - 39,646,581 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx948,024,733 - 48,142,652 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0953,147,494 - 53,265,400 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0951,429,369 - 51,547,271 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0943,889,887 - 44,006,593 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl943,889,473 - 44,004,325 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0943,533,507 - 43,707,953 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4936,238,645 - 36,356,933 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1936,240,058 - 36,358,347 (+)NCBI
Celera937,284,544 - 37,400,878 (+)NCBICelera
Cytogenetic Map9q21NCBI
Inpp4a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554704,930,568 - 5,040,383 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554704,930,568 - 5,040,153 (+)NCBIChiLan1.0ChiLan1.0
INPP4A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21229,853,793 - 29,999,903 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A29,857,185 - 30,002,660 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A100,720,587 - 100,867,228 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A99,355,307 - 99,499,350 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A99,428,904 - 99,499,350 (+)Ensemblpanpan1.1panPan2
INPP4A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11044,086,533 - 44,221,225 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1044,089,025 - 44,145,506 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1044,008,800 - 44,143,763 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01044,959,356 - 45,094,368 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1044,959,356 - 45,094,231 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11044,669,735 - 44,804,682 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01044,960,705 - 45,095,469 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01045,136,428 - 45,271,376 (-)NCBIUU_Cfam_GSD_1.0
Inpp4a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629284,307,312 - 84,439,129 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367441,629,438 - 1,693,141 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367441,629,432 - 1,692,069 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
INPP4A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl355,711,031 - 55,834,367 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1355,711,025 - 55,779,579 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2358,266,124 - 58,307,943 (-)NCBISscrofa10.2Sscrofa10.2susScr3
INPP4A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1142,161,649 - 2,306,023 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl142,235,510 - 2,302,858 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041169,681,423 - 169,826,862 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Inpp4a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247493,574,625 - 3,632,581 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247493,508,135 - 3,632,581 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in INPP4A
45 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 2q11.1-12.1(chr2:94817406-103252396)x3 copy number gain See cases [RCV000052946] Chr2:94817406..103252396 [GRCh38]
Chr2:95618109..103868854 [GRCh37]
Chr2:94846878..103235286 [NCBI36]
Chr2:2q11.1-12.1
pathogenic
GRCh38/hg38 2q11.2-13(chr2:97672522-110211318)x3 copy number gain See cases [RCV000052947] Chr2:97672522..110211318 [GRCh38]
Chr2:98288985..110968895 [GRCh37]
Chr2:97655417..110326184 [NCBI36]
Chr2:2q11.2-13
pathogenic
GRCh38/hg38 2p11.2-q11.2(chr2:91443218-102334856)x3 copy number gain See cases [RCV000052945] Chr2:91443218..102334856 [GRCh38]
Chr2:91617683..102951316 [GRCh37]
Chr2:90981410..102317748 [NCBI36]
Chr2:2p11.2-q11.2
pathogenic
NM_001134224.1(INPP4A):c.2293C>T (p.Arg765Cys) single nucleotide variant Malignant melanoma [RCV000065732] Chr2:98565765 [GRCh38]
Chr2:99182228 [GRCh37]
Chr2:98548660 [NCBI36]
Chr2:2q11.2
not provided
GRCh38/hg38 2q11.1-11.2(chr2:95337458-99072953)x3 copy number gain See cases [RCV000138012] Chr2:95337458..99072953 [GRCh38]
Chr2:96003206..99689416 [GRCh37]
Chr2:95366933..99055848 [NCBI36]
Chr2:2q11.1-11.2
uncertain significance
GRCh38/hg38 2q11.2(chr2:98411773-101636907)x1 copy number loss See cases [RCV000139206] Chr2:98411773..101636907 [GRCh38]
Chr2:99028236..102253369 [GRCh37]
Chr2:98394668..101619801 [NCBI36]
Chr2:2q11.2
likely pathogenic
GRCh38/hg38 2q11.1-13(chr2:94678532-110602409)x3 copy number gain See cases [RCV000141075] Chr2:94678532..110602409 [GRCh38]
Chr2:95344257..111359986 [GRCh37]
Chr2:94707984..111076455 [NCBI36]
Chr2:2q11.1-13
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q11.1-12.3(chr2:95529039-108518266) copy number gain See cases [RCV000449270] Chr2:95529039..108518266 [GRCh37]
Chr2:2q11.1-12.3
pathogenic
GRCh37/hg19 2q11.1-13(chr2:95327499-111370025)x4 copy number gain See cases [RCV000446842] Chr2:95327499..111370025 [GRCh37]
Chr2:2q11.1-13
pathogenic
GRCh37/hg19 2q11.1-11.2(chr2:95691600-100587394) copy number gain See cases [RCV000447723] Chr2:95691600..100587394 [GRCh37]
Chr2:2q11.1-11.2
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q11.1-12.2(chr2:95518497-107186127) copy number gain See cases [RCV000511158] Chr2:95518497..107186127 [GRCh37]
Chr2:2q11.1-12.2
uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
Single allele deletion not provided [RCV000714264] Chr2:40608411..146900718 [GRCh37]
Chr2:2p22.1-q22.3
likely pathogenic
GRCh37/hg19 2q11.1-13(chr2:96353030-114045463)x3 copy number gain not provided [RCV000682168] Chr2:96353030..114045463 [GRCh37]
Chr2:2q11.1-13
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
NM_001134225.2(INPP4A):c.36C>T (p.Ala12=) single nucleotide variant Dyskeratosis congenita, autosomal dominant 1 [RCV000761361] Chr2:98520084 [GRCh38]
Chr2:99136547 [GRCh37]
Chr2:2q11.2
likely pathogenic
NM_001134225.2(INPP4A):c.352_353del (p.Ser118fs) microsatellite Pectus excavatum [RCV000991365] Chr2:98535807..98535808 [GRCh38]
Chr2:99152270..99152271 [GRCh37]
Chr2:2q11.2
likely pathogenic
NM_001134225.2(INPP4A):c.2152+8G>A single nucleotide variant not provided [RCV000885123] Chr2:98564771 [GRCh38]
Chr2:99181234 [GRCh37]
Chr2:2q11.2
benign
NM_001134225.2(INPP4A):c.1965C>T (p.Ser655=) single nucleotide variant not provided [RCV000972377] Chr2:98563574 [GRCh38]
Chr2:99180037 [GRCh37]
Chr2:2q11.2
benign
NM_001134225.2(INPP4A):c.678T>C (p.Gly226=) single nucleotide variant not provided [RCV000964868] Chr2:98539535 [GRCh38]
Chr2:99155998 [GRCh37]
Chr2:2q11.2
benign
NM_001134225.2(INPP4A):c.115C>T (p.Gln39Ter) single nucleotide variant Intellectual disability [RCV000986112] Chr2:98520695 [GRCh38]
Chr2:99137158 [GRCh37]
Chr2:2q11.2
pathogenic
NM_001134225.2(INPP4A):c.1458T>C (p.Thr486=) single nucleotide variant not provided [RCV000892054] Chr2:98554381 [GRCh38]
Chr2:99170844 [GRCh37]
Chr2:2q11.2
benign
NM_001134225.2(INPP4A):c.2034C>T (p.Thr678=) single nucleotide variant not provided [RCV000885380] Chr2:98564645 [GRCh38]
Chr2:99181108 [GRCh37]
Chr2:2q11.2
benign
NM_001134225.2(INPP4A):c.930C>T (p.Thr310=) single nucleotide variant not provided [RCV000892263] Chr2:98543988 [GRCh38]
Chr2:99160451 [GRCh37]
Chr2:2q11.2
benign
NM_001134225.2(INPP4A):c.246G>A (p.Lys82=) single nucleotide variant not provided [RCV000975964] Chr2:98533471 [GRCh38]
Chr2:99149934 [GRCh37]
Chr2:2q11.2
likely benign
NM_001134225.2(INPP4A):c.324T>A (p.Leu108=) single nucleotide variant not provided [RCV000933281] Chr2:98535782 [GRCh38]
Chr2:99152245 [GRCh37]
Chr2:2q11.2
likely benign
NM_001134225.2(INPP4A):c.2571G>C (p.Leu857=) single nucleotide variant not provided [RCV000955291] Chr2:98572867 [GRCh38]
Chr2:99189330 [GRCh37]
Chr2:2q11.2
benign
NM_001134225.2(INPP4A):c.1526G>A (p.Ser509Asn) single nucleotide variant not provided [RCV000879790] Chr2:98554449 [GRCh38]
Chr2:99170912 [GRCh37]
Chr2:2q11.2
likely benign
NM_001134225.2(INPP4A):c.1968G>C (p.Ala656=) single nucleotide variant not provided [RCV000879930] Chr2:98563577 [GRCh38]
Chr2:99180040 [GRCh37]
Chr2:2q11.2
benign
NM_001134225.2(INPP4A):c.2029-10G>C single nucleotide variant not provided [RCV001665407] Chr2:98564630 [GRCh38]
Chr2:99181093 [GRCh37]
Chr2:2q11.2
likely benign
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) copy number gain Mosaic trisomy 2 [RCV002280628] Chr2:1..243199373 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 copy number loss See cases [RCV002287563] Chr2:11504318..111365996 [GRCh37]
Chr2:2p25.1-q13
pathogenic
NM_001134225.2(INPP4A):c.1429A>G (p.Ile477Val) single nucleotide variant Inborn genetic diseases [RCV003281137] Chr2:98554352 [GRCh38]
Chr2:99170815 [GRCh37]
Chr2:2q11.2
uncertain significance
GRCh37/hg19 2q11.1-11.2(chr2:95341388-100340514)x3 copy number gain not provided [RCV002473932] Chr2:95341388..100340514 [GRCh37]
Chr2:2q11.1-11.2
likely pathogenic
GRCh37/hg19 2q11.2(chr2:98958721-99205212)x3 copy number gain not provided [RCV002472708] Chr2:98958721..99205212 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.1623C>G (p.Asp541Glu) single nucleotide variant Inborn genetic diseases [RCV002683215] Chr2:98555609 [GRCh38]
Chr2:99172072 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.851C>A (p.Ser284Tyr) single nucleotide variant Inborn genetic diseases [RCV002887619] Chr2:98543909 [GRCh38]
Chr2:99160372 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.2410C>G (p.Leu804Val) single nucleotide variant Inborn genetic diseases [RCV002887508] Chr2:98566159 [GRCh38]
Chr2:99182622 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.668C>T (p.Ser223Leu) single nucleotide variant Inborn genetic diseases [RCV002980841] Chr2:98538979 [GRCh38]
Chr2:99155442 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.1546G>A (p.Asp516Asn) single nucleotide variant Inborn genetic diseases [RCV002950045] Chr2:98554469 [GRCh38]
Chr2:99170932 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.679G>A (p.Gly227Ser) single nucleotide variant Inborn genetic diseases [RCV003001557] Chr2:98539536 [GRCh38]
Chr2:99155999 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.1327C>T (p.Leu443Phe) single nucleotide variant Inborn genetic diseases [RCV002919548] Chr2:98552949 [GRCh38]
Chr2:99169412 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.44G>A (p.Arg15His) single nucleotide variant Inborn genetic diseases [RCV002788901] Chr2:98520092 [GRCh38]
Chr2:99136555 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.820G>A (p.Val274Met) single nucleotide variant Inborn genetic diseases [RCV002641807] Chr2:98543878 [GRCh38]
Chr2:99160341 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.2812A>G (p.Met938Val) single nucleotide variant Inborn genetic diseases [RCV002929347] Chr2:98587501 [GRCh38]
Chr2:99203964 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.114A>G (p.Ile38Met) single nucleotide variant Inborn genetic diseases [RCV002826274] Chr2:98520694 [GRCh38]
Chr2:99137157 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.1507C>T (p.Arg503Trp) single nucleotide variant Inborn genetic diseases [RCV002813359] Chr2:98554430 [GRCh38]
Chr2:99170893 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.1642C>T (p.Arg548Trp) single nucleotide variant Inborn genetic diseases [RCV002670662] Chr2:98555628 [GRCh38]
Chr2:99172091 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.1355A>G (p.Gln452Arg) single nucleotide variant Inborn genetic diseases [RCV002673368] Chr2:98554278 [GRCh38]
Chr2:99170741 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.673T>C (p.Phe225Leu) single nucleotide variant Inborn genetic diseases [RCV002921040] Chr2:98539530 [GRCh38]
Chr2:99155993 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.1837C>T (p.Pro613Ser) single nucleotide variant Inborn genetic diseases [RCV002936351] Chr2:98559477 [GRCh38]
Chr2:99175940 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.355G>A (p.Val119Met) single nucleotide variant Inborn genetic diseases [RCV002896712] Chr2:98535813 [GRCh38]
Chr2:99152276 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.1072G>A (p.Val358Ile) single nucleotide variant Inborn genetic diseases [RCV003196970] Chr2:98546603 [GRCh38]
Chr2:99163066 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.2528G>A (p.Arg843Gln) single nucleotide variant Inborn genetic diseases [RCV003204494] Chr2:98572824 [GRCh38]
Chr2:99189287 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.182A>G (p.Asp61Gly) single nucleotide variant Inborn genetic diseases [RCV003373536] Chr2:98533407 [GRCh38]
Chr2:99149870 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.779G>A (p.Arg260Gln) single nucleotide variant Inborn genetic diseases [RCV003362446] Chr2:98539636 [GRCh38]
Chr2:99156099 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.887C>T (p.Thr296Ile) single nucleotide variant Inborn genetic diseases [RCV003386231] Chr2:98543945 [GRCh38]
Chr2:99160408 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_001134225.2(INPP4A):c.2195T>C (p.Met732Thr) single nucleotide variant Inborn genetic diseases [RCV003366061] Chr2:98565682 [GRCh38]
Chr2:99182145 [GRCh37]
Chr2:2q11.2
uncertain significance
GRCh37/hg19 2q11.1-11.2(chr2:95773428-102550061)x3 copy number gain not provided [RCV003484069] Chr2:95773428..102550061 [GRCh37]
Chr2:2q11.1-11.2
likely pathogenic
GRCh37/hg19 2q11.1-11.2(chr2:96732520-99142320)x3 copy number gain not provided [RCV003484071] Chr2:96732520..99142320 [GRCh37]
Chr2:2q11.1-11.2
uncertain significance
NM_001134225.2(INPP4A):c.1635_1649del (p.Gln545_Leu549del) deletion not provided [RCV003885580] Chr2:98555615..98555629 [GRCh38]
Chr2:99172078..99172092 [GRCh37]
Chr2:2q11.2
likely benign
NM_001134225.2(INPP4A):c.1870G>A (p.Ala624Thr) single nucleotide variant Inborn genetic diseases [RCV003361748] Chr2:98563479 [GRCh38]
Chr2:99179942 [GRCh37]
Chr2:2q11.2
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:6498
Count of miRNA genes:1320
Interacting mature miRNAs:1733
Transcripts:ENST00000074304, ENST00000409016, ENST00000409463, ENST00000409540, ENST00000409851, ENST00000463367, ENST00000467042, ENST00000468638, ENST00000498026, ENST00000523221, ENST00000545415
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D2S2187  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,105,344 - 99,105,498UniSTSGRCh37
Build 36298,471,776 - 98,471,930RGDNCBI36
Celera293,309,062 - 93,309,216RGD
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map2q11UniSTS
HuRef292,870,513 - 92,870,667UniSTS
Marshfield Genetic Map2110.68UniSTS
Marshfield Genetic Map2110.68RGD
Genethon Genetic Map2118.1UniSTS
TNG Radiation Hybrid Map258321.0UniSTS
deCODE Assembly Map2113.49UniSTS
Stanford-G3 RH Map24223.0UniSTS
Whitehead-YAC Contig Map2 UniSTS
NCBI RH Map2542.7UniSTS
GeneMap99-G3 RH Map25136.0UniSTS
RH98872  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,205,467 - 99,205,599UniSTSGRCh37
Build 36298,571,899 - 98,572,031RGDNCBI36
Celera293,409,190 - 93,409,322RGD
Cytogenetic Map2q11.2UniSTS
HuRef292,970,054 - 92,970,186UniSTS
GeneMap99-GB4 RH Map2354.27UniSTS
RH102815  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,207,029 - 99,207,189UniSTSGRCh37
Build 36298,573,461 - 98,573,621RGDNCBI36
Celera293,410,752 - 93,410,912RGD
Cytogenetic Map2q11.2UniSTS
HuRef292,971,616 - 92,971,776UniSTS
GeneMap99-GB4 RH Map2355.41UniSTS
RH119794  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,189,925 - 99,190,266UniSTSGRCh37
Build 36298,556,357 - 98,556,698RGDNCBI36
Celera293,393,648 - 93,393,989RGD
Cytogenetic Map2q11.2UniSTS
HuRef292,955,099 - 92,955,440UniSTS
TNG Radiation Hybrid Map103859.0UniSTS
TNG Radiation Hybrid Map258281.0UniSTS
RH119291  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,178,058 - 99,178,338UniSTSGRCh37
Build 36298,544,490 - 98,544,770RGDNCBI36
Celera293,381,781 - 93,382,061RGD
Cytogenetic Map2q11.2UniSTS
HuRef292,943,232 - 92,943,512UniSTS
TNG Radiation Hybrid Map258297.0UniSTS
DYS418  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,060,931 - 99,061,072UniSTSGRCh37
Build 36298,427,363 - 98,427,504RGDNCBI36
Celera293,264,650 - 93,264,791RGD
Cytogenetic Map2q11.2UniSTS
HuRef292,826,100 - 92,826,241UniSTS
D2S1315  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,147,743 - 99,148,053UniSTSGRCh37
Build 36298,514,175 - 98,514,485RGDNCBI36
Celera293,351,461 - 93,351,771RGD
Cytogenetic Map2q11.2UniSTS
HuRef292,912,912 - 92,913,222UniSTS
Whitehead-YAC Contig Map2 UniSTS
D2S2002  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,060,922 - 99,061,024UniSTSGRCh37
Build 36298,427,354 - 98,427,456RGDNCBI36
Celera293,264,641 - 93,264,743RGD
Cytogenetic Map2q11.2UniSTS
HuRef292,826,091 - 92,826,193UniSTS
Whitehead-RH Map2498.1UniSTS
Whitehead-YAC Contig Map2 UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1298 699 359 19 1199 23 905 678 2028 88 450 682 7 1 191 559 4 2
Low 1141 2292 1366 604 752 441 3451 1519 1706 331 1010 931 168 1013 2229 2
Below cutoff 1 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001134224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001134225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001351424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001351425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001351426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001351427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001351428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001351429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006712508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017004000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017004001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017004003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024452876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001738737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001738738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007074203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_922915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_922916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB462500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF368319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK091533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK307823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U26398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U96919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000074304   ⟹   ENSP00000074304
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,444,858 - 98,591,033 (+)Ensembl
RefSeq Acc Id: ENST00000409016   ⟹   ENSP00000386704
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,444,854 - 98,594,390 (+)Ensembl
RefSeq Acc Id: ENST00000409463   ⟹   ENSP00000386329
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,444,858 - 98,587,859 (+)Ensembl
RefSeq Acc Id: ENST00000409540   ⟹   ENSP00000387294
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,444,950 - 98,581,821 (+)Ensembl
RefSeq Acc Id: ENST00000409851   ⟹   ENSP00000386777
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,444,858 - 98,594,392 (+)Ensembl
RefSeq Acc Id: ENST00000463367
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,519,147 - 98,521,766 (+)Ensembl
RefSeq Acc Id: ENST00000467042
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,566,028 - 98,569,830 (+)Ensembl
RefSeq Acc Id: ENST00000468638
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,554,425 - 98,556,122 (+)Ensembl
RefSeq Acc Id: ENST00000498026
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,571,897 - 98,587,573 (+)Ensembl
RefSeq Acc Id: ENST00000523221   ⟹   ENSP00000427722
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,520,049 - 98,587,608 (+)Ensembl
RefSeq Acc Id: ENST00000706935   ⟹   ENSP00000516656
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl298,444,907 - 98,582,164 (+)Ensembl
RefSeq Acc Id: NM_001134224   ⟹   NP_001127696
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
GRCh37299,061,321 - 99,207,496 (+)ENTREZGENE
HuRef292,826,490 - 92,972,083 (+)ENTREZGENE
CHM1_1299,065,634 - 99,211,815 (+)NCBI
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001134225   ⟹   NP_001127697
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
GRCh37299,061,321 - 99,207,496 (+)ENTREZGENE
HuRef292,826,490 - 92,972,083 (+)ENTREZGENE
CHM1_1299,065,634 - 99,211,815 (+)NCBI
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001351424   ⟹   NP_001338353
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,587 - 98,581,821 (+)NCBI
T2T-CHM13v2.0298,902,886 - 99,040,132 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001351425   ⟹   NP_001338354
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001351426   ⟹   NP_001338355
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,446,010 - 98,594,392 (+)NCBI
T2T-CHM13v2.0298,904,309 - 99,052,718 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001351427   ⟹   NP_001338356
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,446,010 - 98,594,392 (+)NCBI
T2T-CHM13v2.0298,904,309 - 99,052,718 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001351428   ⟹   NP_001338357
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,446,010 - 98,594,392 (+)NCBI
T2T-CHM13v2.0298,904,309 - 99,052,718 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001351429   ⟹   NP_001338358
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,446,010 - 98,594,392 (+)NCBI
T2T-CHM13v2.0298,904,309 - 99,052,718 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001566   ⟹   NP_001557
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
GRCh37299,061,321 - 99,207,496 (+)ENTREZGENE
Build 36298,501,857 - 98,564,716 (+)NCBI Archive
HuRef292,826,490 - 92,972,083 (+)ENTREZGENE
CHM1_1299,065,634 - 99,202,603 (+)NCBI
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
Sequence:
RefSeq Acc Id: NM_004027   ⟹   NP_004018
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
GRCh37299,061,321 - 99,207,496 (+)ENTREZGENE
Build 36298,501,857 - 98,570,614 (+)NCBI Archive
HuRef292,826,490 - 92,972,083 (+)ENTREZGENE
CHM1_1299,065,634 - 99,211,815 (+)NCBI
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006712499   ⟹   XP_006712562
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006712500   ⟹   XP_006712563
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006712501   ⟹   XP_006712564
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006712502   ⟹   XP_006712565
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006712503   ⟹   XP_006712566
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006712505   ⟹   XP_006712568
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,586,266 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006712506   ⟹   XP_006712569
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011511122   ⟹   XP_011509424
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011511123   ⟹   XP_011509425
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,577,975 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011511124   ⟹   XP_011509426
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011511125   ⟹   XP_011509427
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,520,754 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011511127   ⟹   XP_011509429
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,546,605 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017003994   ⟹   XP_016859483
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017004000   ⟹   XP_016859489
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017004001   ⟹   XP_016859490
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024452876   ⟹   XP_024308644
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,587 - 98,581,821 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047444198   ⟹   XP_047300154
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
RefSeq Acc Id: XM_047444199   ⟹   XP_047300155
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,587 - 98,594,392 (+)NCBI
RefSeq Acc Id: XM_047444200   ⟹   XP_047300156
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
RefSeq Acc Id: XM_047444201   ⟹   XP_047300157
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
RefSeq Acc Id: XM_047444203   ⟹   XP_047300159
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
RefSeq Acc Id: XM_047444204   ⟹   XP_047300160
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,587 - 98,594,392 (+)NCBI
RefSeq Acc Id: XM_047444205   ⟹   XP_047300161
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,583,283 (+)NCBI
RefSeq Acc Id: XM_047444206   ⟹   XP_047300162
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,586,266 (+)NCBI
RefSeq Acc Id: XM_047444207   ⟹   XP_047300163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,581,821 (+)NCBI
RefSeq Acc Id: XM_047444209   ⟹   XP_047300165
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,587 - 98,594,392 (+)NCBI
RefSeq Acc Id: XM_047444210   ⟹   XP_047300166
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,586,266 (+)NCBI
RefSeq Acc Id: XM_047444211   ⟹   XP_047300167
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,594,392 (+)NCBI
RefSeq Acc Id: XM_047444212   ⟹   XP_047300168
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,577,975 (+)NCBI
RefSeq Acc Id: XM_047444213   ⟹   XP_047300169
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,577,975 (+)NCBI
RefSeq Acc Id: XM_047444214   ⟹   XP_047300170
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,586,266 (+)NCBI
RefSeq Acc Id: XM_047444215   ⟹   XP_047300171
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,577,975 (+)NCBI
RefSeq Acc Id: XM_047444217   ⟹   XP_047300173
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,542,187 - 98,581,821 (+)NCBI
RefSeq Acc Id: XM_047444218   ⟹   XP_047300174
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,546,605 - 98,594,392 (+)NCBI
RefSeq Acc Id: XM_054341838   ⟹   XP_054197813
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341839   ⟹   XP_054197814
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,902,886 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341840   ⟹   XP_054197815
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341841   ⟹   XP_054197816
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341842   ⟹   XP_054197817
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341843   ⟹   XP_054197818
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341844   ⟹   XP_054197819
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341845   ⟹   XP_054197820
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341846   ⟹   XP_054197821
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,902,886 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341847   ⟹   XP_054197822
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341848   ⟹   XP_054197823
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341849   ⟹   XP_054197824
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341850   ⟹   XP_054197825
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,902,886 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341851   ⟹   XP_054197826
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,039,880 (+)NCBI
RefSeq Acc Id: XM_054341852   ⟹   XP_054197827
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341853   ⟹   XP_054197828
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,041,585 (+)NCBI
RefSeq Acc Id: XM_054341854   ⟹   XP_054197829
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,041,585 (+)NCBI
RefSeq Acc Id: XM_054341855   ⟹   XP_054197830
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,512 (+)NCBI
RefSeq Acc Id: XM_054341856   ⟹   XP_054197831
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341857   ⟹   XP_054197832
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,041,585 (+)NCBI
RefSeq Acc Id: XM_054341858   ⟹   XP_054197833
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341859   ⟹   XP_054197834
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341860   ⟹   XP_054197835
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,041,585 (+)NCBI
RefSeq Acc Id: XM_054341861   ⟹   XP_054197836
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341862   ⟹   XP_054197837
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341863   ⟹   XP_054197838
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,052,718 (+)NCBI
RefSeq Acc Id: XM_054341864   ⟹   XP_054197839
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,039,880 (+)NCBI
RefSeq Acc Id: XM_054341865   ⟹   XP_054197840
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,039,880 (+)NCBI
RefSeq Acc Id: XM_054341866   ⟹   XP_054197841
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,041,585 (+)NCBI
RefSeq Acc Id: XM_054341867   ⟹   XP_054197842
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,039,880 (+)NCBI
RefSeq Acc Id: XM_054341868   ⟹   XP_054197843
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,979,527 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341869   ⟹   XP_054197844
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,002,149 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341870   ⟹   XP_054197845
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,004,913 - 99,040,132 (+)NCBI
RefSeq Acc Id: XM_054341871   ⟹   XP_054197846
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0299,004,913 - 99,052,718 (+)NCBI
RefSeq Acc Id: XR_007074203
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,572,900 (+)NCBI
RefSeq Acc Id: XR_008486362
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0298,903,157 - 99,031,211 (+)NCBI
RefSeq Acc Id: XR_922915
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,586,266 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001127696 (Get FASTA)   NCBI Sequence Viewer  
  NP_001127697 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338353 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338354 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338355 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338356 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338357 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338358 (Get FASTA)   NCBI Sequence Viewer  
  NP_001557 (Get FASTA)   NCBI Sequence Viewer  
  NP_004018 (Get FASTA)   NCBI Sequence Viewer  
  XP_006712562 (Get FASTA)   NCBI Sequence Viewer  
  XP_006712563 (Get FASTA)   NCBI Sequence Viewer  
  XP_006712564 (Get FASTA)   NCBI Sequence Viewer  
  XP_006712565 (Get FASTA)   NCBI Sequence Viewer  
  XP_006712566 (Get FASTA)   NCBI Sequence Viewer  
  XP_006712568 (Get FASTA)   NCBI Sequence Viewer  
  XP_006712569 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509424 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509425 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509426 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509427 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509429 (Get FASTA)   NCBI Sequence Viewer  
  XP_016859483 (Get FASTA)   NCBI Sequence Viewer  
  XP_016859489 (Get FASTA)   NCBI Sequence Viewer  
  XP_016859490 (Get FASTA)   NCBI Sequence Viewer  
  XP_024308644 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300154 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300155 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300156 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300157 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300159 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300160 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300161 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300162 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300163 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300165 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300166 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300167 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300168 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300169 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300170 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300171 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300173 (Get FASTA)   NCBI Sequence Viewer  
  XP_047300174 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197813 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197814 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197815 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197816 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197817 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197818 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197819 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197820 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197821 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197822 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197823 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197824 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197825 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197826 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197827 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197828 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197829 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197830 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197831 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197832 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197833 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197834 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197835 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197836 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197837 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197838 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197839 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197840 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197841 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197842 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197843 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197844 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197845 (Get FASTA)   NCBI Sequence Viewer  
  XP_054197846 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB01068 (Get FASTA)   NCBI Sequence Viewer  
  AAB72150 (Get FASTA)   NCBI Sequence Viewer  
  AAH28361 (Get FASTA)   NCBI Sequence Viewer  
  AAK58870 (Get FASTA)   NCBI Sequence Viewer  
  AAX93230 (Get FASTA)   NCBI Sequence Viewer  
  EAX01904 (Get FASTA)   NCBI Sequence Viewer  
  EAX01905 (Get FASTA)   NCBI Sequence Viewer  
  EAX01906 (Get FASTA)   NCBI Sequence Viewer  
  EAX01907 (Get FASTA)   NCBI Sequence Viewer  
  EAX01908 (Get FASTA)   NCBI Sequence Viewer  
  EAX01909 (Get FASTA)   NCBI Sequence Viewer  
  EAX01910 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000386329.1
  ENSP00000386704
  ENSP00000386704.3
  ENSP00000386777
  ENSP00000386777.4
  ENSP00000387294
  ENSP00000387294.3
  ENSP00000427722
  ENSP00000427722.1
  ENSP00000516656.1
GenBank Protein Q96PE3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001127696   ⟸   NM_001134224
- Peptide Label: isoform d
- UniProtKB: Q53TD8 (UniProtKB/Swiss-Prot),   Q13187 (UniProtKB/Swiss-Prot),   O15326 (UniProtKB/Swiss-Prot),   Q8TC02 (UniProtKB/Swiss-Prot),   Q96PE3 (UniProtKB/Swiss-Prot),   A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_004018   ⟸   NM_004027
- Peptide Label: isoform a
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001127697   ⟸   NM_001134225
- Peptide Label: isoform c
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001557   ⟸   NM_001566
- Peptide Label: isoform b
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006712566   ⟸   XM_006712503
- Peptide Label: isoform X6
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006712568   ⟸   XM_006712505
- Peptide Label: isoform X14
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006712562   ⟸   XM_006712499
- Peptide Label: isoform X1
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006712565   ⟸   XM_006712502
- Peptide Label: isoform X4
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006712569   ⟸   XM_006712506
- Peptide Label: isoform X16
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006712563   ⟸   XM_006712500
- Peptide Label: isoform X2
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006712564   ⟸   XM_006712501
- Peptide Label: isoform X3
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011509426   ⟸   XM_011511124
- Peptide Label: isoform X19
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011509425   ⟸   XM_011511123
- Peptide Label: isoform X12
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011509424   ⟸   XM_011511122
- Peptide Label: isoform X5
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011509427   ⟸   XM_011511125
- Peptide Label: isoform X28
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011509429   ⟸   XM_011511127
- Peptide Label: isoform X30
- Sequence:
RefSeq Acc Id: XP_016859489   ⟸   XM_017004000
- Peptide Label: isoform X21
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016859483   ⟸   XM_017003994
- Peptide Label: isoform X13
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016859490   ⟸   XM_017004001
- Peptide Label: isoform X22
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024308644   ⟸   XM_024452876
- Peptide Label: isoform X1
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001338353   ⟸   NM_001351424
- Peptide Label: isoform e
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001338354   ⟸   NM_001351425
- Peptide Label: isoform f
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001338355   ⟸   NM_001351426
- Peptide Label: isoform f
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001338356   ⟸   NM_001351427
- Peptide Label: isoform a
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001338357   ⟸   NM_001351428
- Peptide Label: isoform g
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001338358   ⟸   NM_001351429
- Peptide Label: isoform h
- UniProtKB: A0A9L9PY55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000074304   ⟸   ENST00000074304
RefSeq Acc Id: ENSP00000427722   ⟸   ENST00000523221
RefSeq Acc Id: ENSP00000386777   ⟸   ENST00000409851
RefSeq Acc Id: ENSP00000387294   ⟸   ENST00000409540
RefSeq Acc Id: ENSP00000386704   ⟸   ENST00000409016
RefSeq Acc Id: ENSP00000386329   ⟸   ENST00000409463
RefSeq Acc Id: XP_047300155   ⟸   XM_047444199
- Peptide Label: isoform X8
RefSeq Acc Id: XP_047300165   ⟸   XM_047444209
- Peptide Label: isoform X19
RefSeq Acc Id: XP_047300160   ⟸   XM_047444204
- Peptide Label: isoform X11
RefSeq Acc Id: XP_047300156   ⟸   XM_047444200
- Peptide Label: isoform X9
RefSeq Acc Id: XP_047300157   ⟸   XM_047444201
- Peptide Label: isoform X10
RefSeq Acc Id: XP_047300159   ⟸   XM_047444203
- Peptide Label: isoform X11
RefSeq Acc Id: XP_047300167   ⟸   XM_047444211
- Peptide Label: isoform X23
RefSeq Acc Id: XP_047300162   ⟸   XM_047444206
- Peptide Label: isoform X17
RefSeq Acc Id: XP_047300166   ⟸   XM_047444210
- Peptide Label: isoform X20
RefSeq Acc Id: XP_047300170   ⟸   XM_047444214
- Peptide Label: isoform X26
RefSeq Acc Id: XP_047300161   ⟸   XM_047444205
- Peptide Label: isoform X15
RefSeq Acc Id: XP_047300154   ⟸   XM_047444198
- Peptide Label: isoform X7
RefSeq Acc Id: XP_047300163   ⟸   XM_047444207
- Peptide Label: isoform X18
RefSeq Acc Id: XP_047300168   ⟸   XM_047444212
- Peptide Label: isoform X24
RefSeq Acc Id: XP_047300169   ⟸   XM_047444213
- Peptide Label: isoform X25
RefSeq Acc Id: XP_047300171   ⟸   XM_047444215
- Peptide Label: isoform X27
RefSeq Acc Id: XP_047300173   ⟸   XM_047444217
- Peptide Label: isoform X29
RefSeq Acc Id: XP_047300174   ⟸   XM_047444218
- Peptide Label: isoform X31
RefSeq Acc Id: ENSP00000516656   ⟸   ENST00000706935
RefSeq Acc Id: XP_054197821   ⟸   XM_054341846
- Peptide Label: isoform X8
RefSeq Acc Id: XP_054197825   ⟸   XM_054341850
- Peptide Label: isoform X11
RefSeq Acc Id: XP_054197814   ⟸   XM_054341839
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054197819   ⟸   XM_054341844
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054197822   ⟸   XM_054341847
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054197836   ⟸   XM_054341861
- Peptide Label: isoform X21
RefSeq Acc Id: XP_054197823   ⟸   XM_054341848
- Peptide Label: isoform X10
RefSeq Acc Id: XP_054197834   ⟸   XM_054341859
- Peptide Label: isoform X19
RefSeq Acc Id: XP_054197837   ⟸   XM_054341862
- Peptide Label: isoform X22
RefSeq Acc Id: XP_054197824   ⟸   XM_054341849
- Peptide Label: isoform X11
RefSeq Acc Id: XP_054197838   ⟸   XM_054341863
- Peptide Label: isoform X23
RefSeq Acc Id: XP_054197828   ⟸   XM_054341853
- Peptide Label: isoform X14
RefSeq Acc Id: XP_054197829   ⟸   XM_054341854
- Peptide Label: isoform X14
RefSeq Acc Id: XP_054197832   ⟸   XM_054341857
- Peptide Label: isoform X17
RefSeq Acc Id: XP_054197835   ⟸   XM_054341860
- Peptide Label: isoform X20
RefSeq Acc Id: XP_054197841   ⟸   XM_054341866
- Peptide Label: isoform X26
RefSeq Acc Id: XP_054197830   ⟸   XM_054341855
- Peptide Label: isoform X15
RefSeq Acc Id: XP_054197813   ⟸   XM_054341838
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054197817   ⟸   XM_054341842
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054197831   ⟸   XM_054341856
- Peptide Label: isoform X16
RefSeq Acc Id: XP_054197815   ⟸   XM_054341840
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054197816   ⟸   XM_054341841
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054197820   ⟸   XM_054341845
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054197827   ⟸   XM_054341852
- Peptide Label: isoform X13
RefSeq Acc Id: XP_054197833   ⟸   XM_054341858
- Peptide Label: isoform X18
RefSeq Acc Id: XP_054197818   ⟸   XM_054341843
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054197826   ⟸   XM_054341851
- Peptide Label: isoform X12
RefSeq Acc Id: XP_054197839   ⟸   XM_054341864
- Peptide Label: isoform X24
RefSeq Acc Id: XP_054197840   ⟸   XM_054341865
- Peptide Label: isoform X25
RefSeq Acc Id: XP_054197842   ⟸   XM_054341867
- Peptide Label: isoform X27
RefSeq Acc Id: XP_054197843   ⟸   XM_054341868
- Peptide Label: isoform X28
RefSeq Acc Id: XP_054197844   ⟸   XM_054341869
- Peptide Label: isoform X29
RefSeq Acc Id: XP_054197846   ⟸   XM_054341871
- Peptide Label: isoform X31
RefSeq Acc Id: XP_054197845   ⟸   XM_054341870
- Peptide Label: isoform X30
Protein Domains
C2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96PE3-F1-model_v2 AlphaFold Q96PE3 1-977 view protein structure

Promoters
RGD ID:6861120
Promoter ID:EPDNEW_H3725
Type:initiation region
Name:INPP4A_1
Description:inositol polyphosphate-4-phosphatase type I A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H3726  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,444,858 - 98,444,918EPDNEW
RGD ID:6797653
Promoter ID:HG_KWN:34057
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   Lymphoblastoid
Transcripts:OTTHUMT00000329570,   UC002SYY.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36298,501,079 - 98,501,579 (+)MPROMDB
RGD ID:6861122
Promoter ID:EPDNEW_H3726
Type:multiple initiation site
Name:INPP4A_2
Description:inositol polyphosphate-4-phosphatase type I A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H3725  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38298,520,109 - 98,520,169EPDNEW
RGD ID:6797654
Promoter ID:HG_KWN:34058
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000329571
Position:
Human AssemblyChrPosition (strand)Source
Build 36298,537,491 - 98,537,991 (+)MPROMDB
RGD ID:6797655
Promoter ID:HG_KWN:34059
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000329572
Position:
Human AssemblyChrPosition (strand)Source
Build 36298,548,851 - 98,549,351 (+)MPROMDB
RGD ID:6797656
Promoter ID:HG_KWN:34060
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000329573
Position:
Human AssemblyChrPosition (strand)Source
Build 36298,554,266 - 98,554,837 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:6074 AgrOrtholog
COSMIC INPP4A COSMIC
Ensembl Genes ENSG00000040933 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000409016 ENTREZGENE
  ENST00000409016.8 UniProtKB/Swiss-Prot
  ENST00000409463.5 UniProtKB/TrEMBL
  ENST00000409540 ENTREZGENE
  ENST00000409540.7 UniProtKB/Swiss-Prot
  ENST00000409851 ENTREZGENE
  ENST00000409851.8 UniProtKB/Swiss-Prot
  ENST00000523221 ENTREZGENE
  ENST00000523221.1 UniProtKB/Swiss-Prot
  ENST00000706935.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000040933 GTEx
HGNC ID HGNC:6074 ENTREZGENE
Human Proteome Map INPP4A Human Proteome Map
InterPro C2_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INPP4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:3631 UniProtKB/Swiss-Prot
NCBI Gene 3631 ENTREZGENE
OMIM 600916 OMIM
PANTHER INOSITOL POLYPHOSPHATE-4-PHOSPHATASE TYPE I A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12187 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA29882 PharmGKB
PROSITE PS50004 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49562 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A9L9PY55 ENTREZGENE, UniProtKB/TrEMBL
  B8ZZB2_HUMAN UniProtKB/TrEMBL
  INP4A_HUMAN UniProtKB/Swiss-Prot
  O15326 ENTREZGENE
  Q13187 ENTREZGENE
  Q53TD8 ENTREZGENE
  Q8TC02 ENTREZGENE
  Q96PE3 ENTREZGENE
UniProt Secondary O15326 UniProtKB/Swiss-Prot
  Q13187 UniProtKB/Swiss-Prot
  Q53TD8 UniProtKB/Swiss-Prot
  Q8TC02 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 INPP4A  inositol polyphosphate-4-phosphatase type I A  INPP4A  inositol polyphosphate-4-phosphatase, type I, 107kDa  Symbol and/or name change 5135510 APPROVED