Thop1 (thimet oligopeptidase 1) - Rat Genome Database

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Gene: Thop1 (thimet oligopeptidase 1) Mus musculus
Analyze
Symbol: Thop1
Name: thimet oligopeptidase 1
RGD ID: 68461
MGI Page MGI
Description: Enables metalloendopeptidase activity. Acts upstream of or within intracellular signal transduction and peptide metabolic process. Predicted to be located in cytoplasm. Predicted to be active in mitochondrial intermembrane space. Is expressed in head mesenchyme and vertebral axis musculature. Orthologous to human THOP1 (thimet oligopeptidase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI131655; AI327041; endopeptidase 24.15; EP24.1; EP24.15; thimet oligopeptidase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391080,905,917 - 80,918,194 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1080,905,869 - 80,918,393 (+)EnsemblGRCm39 Ensembl
GRCm381081,070,083 - 81,082,360 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1081,070,035 - 81,082,559 (+)EnsemblGRCm38mm10GRCm38
MGSCv371080,532,828 - 80,545,105 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361080,473,279 - 80,485,687 (+)NCBIMGSCv36mm8
Celera1082,090,182 - 82,102,459 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrotoluene  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-amino-2,6-dinitrotoluene  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (EXP)
Benzo[k]fluoranthene  (EXP)
bisphenol A  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
bleomycin A2  (EXP)
Brodifacoum  (ISO)
capsaicin  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chromium(6+)  (EXP)
clofibric acid  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
enzyme inhibitor  (ISO)
ethanol  (ISO)
fenvalerate  (ISO)
flutamide  (ISO)
folic acid  (EXP)
hydrogen cyanide  (EXP)
indole-3-methanol  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
lovastatin  (EXP)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N-nitrosodiethylamine  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
potassium cyanide  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trimellitic anhydride  (EXP)
tunicamycin  (ISO)
valproic acid  (EXP,ISO)
warfarin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Comparative maps of human 19p13.3 and mouse chromosome 10 allow identification of sequences at evolutionary breakpoints. Puttagunta R, etal., Genome Res 2000 Sep;10(9):1369-80.
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:10969067   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12477932   PMID:12520002   PMID:12819125   PMID:14610273  
PMID:14691545   PMID:15287887   PMID:15741177   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17620116   PMID:18571100   PMID:18799693   PMID:20456597   PMID:21267068   PMID:21677750  
PMID:21873635   PMID:22673621   PMID:24216478   PMID:24457600   PMID:30550785   PMID:31431000   PMID:32079362   PMID:32325033   PMID:36114006  


Genomics

Comparative Map Data
Thop1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391080,905,917 - 80,918,194 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1080,905,869 - 80,918,393 (+)EnsemblGRCm39 Ensembl
GRCm381081,070,083 - 81,082,360 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1081,070,035 - 81,082,559 (+)EnsemblGRCm38mm10GRCm38
MGSCv371080,532,828 - 80,545,105 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361080,473,279 - 80,485,687 (+)NCBIMGSCv36mm8
Celera1082,090,182 - 82,102,459 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
THOP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38192,785,503 - 2,815,807 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl192,785,503 - 2,815,807 (+)EnsemblGRCh38hg38GRCh38
GRCh37192,785,501 - 2,815,805 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36192,736,506 - 2,764,599 (+)NCBINCBI36Build 36hg18NCBI36
Build 34192,736,505 - 2,764,598NCBI
Celera192,721,390 - 2,749,643 (+)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef192,554,996 - 2,583,295 (+)NCBIHuRef
CHM1_1192,785,096 - 2,813,188 (+)NCBICHM1_1
T2T-CHM13v2.0192,760,790 - 2,791,094 (+)NCBIT2T-CHM13v2.0
Thop1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr879,283,617 - 9,295,957 (-)NCBIGRCr8
mRatBN7.278,632,911 - 8,645,339 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl78,632,916 - 8,645,275 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx711,517,596 - 11,530,108 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0713,393,093 - 13,405,605 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0711,259,596 - 11,272,104 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0711,501,145 - 11,513,576 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl711,501,146 - 11,513,581 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0711,668,512 - 11,680,946 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4710,116,822 - 10,129,162 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1710,116,821 - 10,129,088 (-)NCBI
Celera76,820,402 - 6,832,744 (-)NCBICelera
Cytogenetic Map7q11NCBI
Thop1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554955,054,986 - 5,071,279 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554955,055,389 - 5,070,710 (+)NCBIChiLan1.0ChiLan1.0
THOP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2207,179,830 - 7,209,333 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1196,412,831 - 6,442,294 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0191,810,316 - 1,839,523 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1192,765,550 - 2,793,235 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl192,765,550 - 2,793,235 (+)Ensemblpanpan1.1panPan2
THOP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12056,412,578 - 56,432,480 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2056,412,908 - 56,432,446 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2056,208,964 - 56,228,856 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02057,146,032 - 57,165,932 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2057,146,042 - 57,165,951 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12056,199,077 - 56,218,944 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02056,683,949 - 56,703,847 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02056,884,291 - 56,904,201 (-)NCBIUU_Cfam_GSD_1.0
Thop1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118216,196,995 - 216,216,192 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365881,618,541 - 1,637,821 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365881,618,585 - 1,637,788 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
THOP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl275,853,429 - 75,877,494 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1275,857,788 - 75,877,430 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2276,370,019 - 76,389,661 (-)NCBISscrofa10.2Sscrofa10.2susScr3
THOP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.162,564,445 - 2,590,029 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660816,013,877 - 6,039,353 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Thop1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248285,857,846 - 5,873,462 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248285,857,667 - 5,873,055 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Thop1
326 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1133
Count of miRNA genes:565
Interacting mature miRNAs:667
Transcripts:ENSMUST00000005057, ENSMUST00000166015, ENSMUST00000166404, ENSMUST00000167658, ENSMUST00000171484
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101010826587401095Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101270405184079784Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101270405184079784Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101270405184079784Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101270405184079784Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1270405184079784Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1270405184079784Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1270405184079784Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102287589991035862Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4672040382491121Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104933801283338157Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined104984818783848412Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined104984818783848412Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined104984818783848412Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined104984822283848397Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined104984822283848397Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105109149085091639Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105109149085091639Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105149340082491121Mouse
14746991Manh68_mmandible shape 68 (mouse)105228049786280497Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105851696992517096Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1063935779115935905Mouse
1302060El3_mepilepsy 3 (mouse)Not determined106549093899491121Mouse
1300533Aem3_manti-erythrocyte autoantibody modifier 3 (mouse)Not determined106549093899491121Mouse
1301737Insq9_minsulin QTL 9 (mouse)Not determined106549093899491121Mouse
1302035Lmb4_mlupus in MRL and B6 F2 cross (mouse)Not determined106684818792258673Mouse
26884447Sklq9_mskull length QTL 9, 10 week (mouse)1067335830111735905Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1067835830124835905Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
11039497Ltpr5a_mLeishmania tropica response 5a (mouse)1073506901107507047Mouse
4142107Obrq12_mobesity resistance QTL 12 (mouse)Not determined7398721682491121Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1073987216125515907Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1073987216125515907Mouse
1357632Vtbt9_mvertebral trabecular bone trait 9 (mouse)Not determined1075338568109338767Mouse
4142137Femwf3_mfemur work to failure 3 (mouse)Not determined75338568109338767Mouse
1300975Fembrs3_mfemur breaking strength 3 (mouse)Not determined1075338568109338767Mouse
11251717Siim1_mstress induced immobility 1 (mouse)1078381268112381268Mouse

Markers in Region
AI131655  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381081,082,104 - 81,082,219UniSTSGRCm38
MGSCv371080,544,849 - 80,544,964UniSTSGRCm37
Celera1082,102,203 - 82,102,318UniSTS
Cytogenetic Map10C1UniSTS
cM Map1043.0UniSTS
Whitehead/MRC_RH10923.3UniSTS
Whitehead/MRC_RH10923.9UniSTS
UniSTS:236402  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381081,073,196 - 81,073,278UniSTSGRCm38
MGSCv371080,535,941 - 80,536,023UniSTSGRCm37
Celera1082,093,295 - 82,093,377UniSTS
Cytogenetic Map10C1UniSTS
cM Map1043.0UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000005057   ⟹   ENSMUSP00000005057
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,905,869 - 80,918,393 (+)Ensembl
GRCm38.p6 Ensembl1081,070,035 - 81,082,559 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166015
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,909,113 - 80,914,589 (+)Ensembl
GRCm38.p6 Ensembl1081,073,279 - 81,078,755 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166404
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,914,702 - 80,915,913 (+)Ensembl
GRCm38.p6 Ensembl1081,078,868 - 81,080,079 (+)Ensembl
RefSeq Acc Id: ENSMUST00000167658
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,905,961 - 80,910,711 (+)Ensembl
GRCm38.p6 Ensembl1081,070,127 - 81,074,877 (+)Ensembl
RefSeq Acc Id: ENSMUST00000171484
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1080,905,993 - 80,914,438 (+)Ensembl
GRCm38.p6 Ensembl1081,070,159 - 81,078,604 (+)Ensembl
RefSeq Acc Id: NM_022653   ⟹   NP_073144
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391080,905,917 - 80,918,194 (+)NCBI
GRCm381081,070,083 - 81,082,360 (+)ENTREZGENE
MGSCv371080,532,828 - 80,545,105 (+)RGD
Celera1082,090,182 - 82,102,459 (+)RGD
cM Map10 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_073144   ⟸   NM_022653
- UniProtKB: Q9EPX1 (UniProtKB/Swiss-Prot),   Q8K2D4 (UniProtKB/Swiss-Prot),   Q8K0J9 (UniProtKB/Swiss-Prot),   Q8C1A5 (UniProtKB/Swiss-Prot),   A0A0R4IZY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000005057   ⟸   ENSMUST00000005057
Protein Domains
Peptidase M3A/M3B catalytic

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8C1A5-F1-model_v2 AlphaFold Q8C1A5 1-687 view protein structure

Promoters
RGD ID:6820006
Promoter ID:MM_KWN:4937
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:UC007GFV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,532,569 - 80,533,069 (+)MPROMDB
RGD ID:6848578
Promoter ID:MM_TRO:1056
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:MTR002368.10.1477.2
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,544,466 - 80,544,966 (+)MPROMDB
RGD ID:8672754
Promoter ID:EPDNEW_M14401
Type:initiation region
Name:Thop1_1
Description:Mus musculus thimet oligopeptidase 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381081,070,109 - 81,070,169EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1354165 AgrOrtholog
Ensembl Genes ENSMUSG00000004929 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000005057 ENTREZGENE
  ENSMUST00000005057.7 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1370.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.390.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro MetalloPept_cat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Neurolysin/TOP_dom2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Neurolysin/TOP_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pept_M3A_M3B UniProtKB/Swiss-Prot
  Pept_M3A_M3B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pept_M3A_M3B UniProtKB/TrEMBL
KEGG Report mmu:50492 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1354165 ENTREZGENE
NCBI Gene 50492 ENTREZGENE
PANTHER PTHR11804 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  THIMET OLIGOPEPTIDASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Peptidase_M3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Thop1 PhenoGen
PROSITE ZINC_PROTEASE UniProtKB/Swiss-Prot
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4IZY0 ENTREZGENE, UniProtKB/TrEMBL
  Q8C1A5 ENTREZGENE
  Q8K0J9 ENTREZGENE
  Q8K2D4 ENTREZGENE
  Q99LK5_MOUSE UniProtKB/TrEMBL
  Q9EPX1 ENTREZGENE
  THOP1_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8K0J9 UniProtKB/Swiss-Prot
  Q8K2D4 UniProtKB/Swiss-Prot
  Q9EPX1 UniProtKB/Swiss-Prot