Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pdlim1 (PDZ and LIM domain 1 (elfin)) Mus musculus
Analyze
Symbol: Pdlim1
Name: PDZ and LIM domain 1 (elfin)
Description: Exhibits transcription coactivator activity. Involved in regulation of transcription by RNA polymerase II. Localizes to the transcription factor complex. Is expressed in several structures, including alimentary system; branchial arch; genitourinary system; heart; and sensory organ. Orthologous to human PDLIM1 (PDZ and LIM domain 1); INTERACTS WITH 1,1-dichloroethene; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: C-terminal LIM domain protein 1; carboxyl terminal LIM domain protein 1; Clim1; CLP36; elfin; LIM domain protein CLP-36; mClim1; PDZ and LIM domain protein 1
Orthologs:
Homo sapiens (human) : PDLIM1 (PDZ and LIM domain 1)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Pdlim1 (PDZ and LIM domain 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdlim1 (PDZ and LIM domain 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PDLIM1 (PDZ and LIM domain 1)
Canis lupus familiaris (dog) : PDLIM1 (PDZ and LIM domain 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdlim1 (PDZ and LIM domain 1)
Sus scrofa (pig) : PDLIM1 (PDZ and LIM domain 1)
more info ...
Related Pseudogenes: Gm12104   Gm5864  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl1940,221,173 - 40,271,842 (-)Ensembl
GRCm381940,222,239 - 40,271,616 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371940,296,729 - 40,346,106 (-)NCBIGRCm37mm9NCBIm37
MGSCv361940,275,550 - 40,324,844 (-)NCBImm8
Celera1941,028,383 - 41,076,730 (-)NCBICelera
Cytogenetic Map19 C3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Pdlim1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 68449
Created: 2001-07-11
Species: Mus musculus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.