LOC100909438 (olfactory receptor-like protein I15-like) - Rat Genome Database
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Gene: LOC100909438 (olfactory receptor-like protein I15-like) Rattus norvegicus
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Symbol: LOC100909438
Name: olfactory receptor-like protein I15-like
RGD ID: 6503579
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); FOUND IN integral component of membrane (inferred); plasma membrane (inferred); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: olfactory receptor 1468-like
RGD Orthologs
Mouse
Alliance Genes
More Info more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Cytogenetic Map10 NCBI


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
LOC100909438
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Cytogenetic Map10 NCBI
Olfr376
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391173,262,072 - 73,266,530 (+)NCBIGRCm39mm39
GRCm381173,371,246 - 73,375,704 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1173,371,246 - 73,377,836 (+)EnsemblGRCm38mm10GRCm38
MGSCv371173,184,748 - 73,189,206 (+)NCBIGRCm37mm9NCBIm37
MGSCv361173,190,946 - 73,191,899 (+)NCBImm8
Celera1180,908,199 - 80,912,657 (+)NCBICelera
Cytogenetic Map11B4NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

renal system reproductive system
High
Medium
Low 1
Below cutoff 1 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003752201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AABR07050871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Protein Sequences
Protein RefSeqs XP_003752249 (Get FASTA)   NCBI Sequence Viewer  
Protein Domains
G_PROTEIN_RECEP_F1_2

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000053411 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000067141 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000074019 ENTREZGENE, UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report rno:100909438 UniProtKB/TrEMBL
  rno:287487 UniProtKB/TrEMBL
NCBI Gene LOC100909438 ENTREZGENE
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen LOC100909438 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
UniProt M0R801 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary M0RC35 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-07-05 LOC100909438  olfactory receptor-like protein I15-like      Symbol and Name status set to provisional 70820 PROVISIONAL