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Gene: LOC100909593 (class II histocompatibility antigen, M alpha chain-like) Rattus norvegicus
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Symbol: LOC100909593
Name: class II histocompatibility antigen, M alpha chain-like
RGD ID: 6502526
Description: Predicted to be involved in several processes, including antigen processing and presentation of exogenous peptide antigen via MHC class II; chaperone cofactor-dependent protein refolding; and positive regulation of immune response. Predicted to localize to endosome membrane; lysosomal membrane; and multivesicular body. Orthologous to human HLA-DMA (major histocompatibility complex, class II, DM alpha); INTERACTS WITH 1,2-dimethylhydrazine (ortholog); 17alpha-ethynylestradiol (ortholog); 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,935,501 - 3,938,915 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0206,015,055 - 6,018,463 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map20 NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC100909593
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6502526
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.