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Gene: Zfp239 (zinc finger protein 239) Rattus norvegicus
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Symbol: Zfp239
Name: zinc finger protein 239
RGD ID: 6502210
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Orthologous to human ZNF239 (zinc finger protein 239); INTERACTS WITH 1,1-dichloroethene (ortholog); 1,2-dichloroethane (ortholog); 1,2-dimethylhydrazine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100909657; uncharacterized LOC100909657
Orthologs:
Homo sapiens (human) : ZNF239 (zinc finger protein 239)  HGNC  Alliance
Mus musculus (house mouse) : Zfp239 (zinc finger protein 239)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Znf239 (zinc finger protein 239)
Pan paniscus (bonobo/pygmy chimpanzee) : ZNF239 (zinc finger protein 239)
Canis lupus familiaris (dog) : ZNF239 (zinc finger protein 239)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Znf239 (zinc finger protein 239)
Sus scrofa (pig) : ZNF239 (zinc finger protein 239)
Chlorocebus sabaeus (African green monkey) : ZNF239 (zinc finger protein 239)
Heterocephalus glaber (naked mole-rat) : Znf239 (zinc finger protein 239)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04149,902,278 - 149,909,841 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4149,908,375 - 149,908,980 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04215,831,518 - 215,838,957 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera4139,905,074 - 139,912,552 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Zfp239
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6502210
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2020-08-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.