LOC100909833 (N-alpha-acetyltransferase 11-like) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: LOC100909833 (N-alpha-acetyltransferase 11-like) Rattus norvegicus
Analyze
Symbol: LOC100909833
Name: N-alpha-acetyltransferase 11-like
RGD ID: 6501755
Description:
Type: protein-coding
RefSeq Status: WITHDRAWN
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl34,475,582 - 4,476,240 (-)Ensembl
Cytogenetic MapUn NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
NatA complex  (IBA)

Molecular Function

References


Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 4 1 6
Below cutoff 4 13 2 12 2 2 3 9 4 4 5 2

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003752266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000078338
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl34,475,582 - 4,476,240 (-)Ensembl
Protein Sequences
Protein RefSeqs XP_003752314 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
Protein Domains
N-acetyltransferase

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000061294 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000069946 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000078338 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GNAT_dom UniProtKB/TrEMBL
NCBI Gene LOC100909833 ENTREZGENE
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PhenoGen LOC100909833 PhenoGen
PROSITE GNAT UniProtKB/TrEMBL
Superfamily-SCOP Acyl_CoA_acyltransferase UniProtKB/TrEMBL
UniProt M0R635_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-07-05 LOC100909833  N-alpha-acetyltransferase 11-like      Symbol and Name status set to provisional 70820 PROVISIONAL