LOC100910181 (apolipoprotein C-I-like) - Rat Genome Database

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Gene: LOC100910181 (apolipoprotein C-I-like) Rattus norvegicus
Analyze
No known orthologs.
Symbol: LOC100910181
Name: apolipoprotein C-I-like
RGD ID: 6499797
Description: INVOLVED IN lipid transport (inferred); lipoprotein metabolic process (inferred)
Type: protein-coding
RefSeq Status: WITHDRAWN
Also known as: apolipoprotein C-I
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Cytogenetic MapUn NCBI


References


Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system exocrine system hemolymphoid system hepatobiliary system nervous system reproductive system
High
Medium
Low 2 2 2 1 1
Below cutoff 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003752213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Protein Sequences
Protein RefSeqs XP_003752261 (Get FASTA)   NCBI Sequence Viewer  

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000051439 UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000073669 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000091179 UniProtKB/TrEMBL
Gene3D-CATH 4.10.260.30 UniProtKB/TrEMBL
InterPro ApoC-1_sf UniProtKB/TrEMBL
  ApoC-I UniProtKB/TrEMBL
NCBI Gene LOC100910181 ENTREZGENE
PANTHER PTHR16565 UniProtKB/TrEMBL
Pfam ApoC-I UniProtKB/TrEMBL
PhenoGen LOC100910181 PhenoGen
UniProt M0R547_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-07-05 LOC100910181  apolipoprotein C-I-like      Symbol and Name status set to provisional 70820 PROVISIONAL