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Gene: Hmgn5 (high mobility group nucleosome binding domain 5) Rattus norvegicus
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Symbol: Hmgn5
Name: high mobility group nucleosome binding domain 5
Description: Predicted to have chromatin binding activity. Predicted to be involved in several processes, including glutathione metabolic process; negative regulation of cell cycle arrest; and regulation of gene expression. Predicted to localize to mitochondrion and nucleoplasm. Orthologous to human HMGN5 (high mobility group nucleosome binding domain 5); INTERACTS WITH 5-aza-2'-deoxycytidine; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: high mobility group nucleosome-binding domain-containing protein 5; high mobility group nucleosome-binding domain-containing protein 5-like; LOC100910616; Nsbp1
Orthologs:
Homo sapiens (human) : HMGN5 (high mobility group nucleosome binding domain 5)  HGNC  Alliance
Mus musculus (house mouse) : Hmgn5 (high-mobility group nucleosome binding domain 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hmgn5 (high mobility group nucleosome binding domain 5)
Pan paniscus (bonobo/pygmy chimpanzee) : HMGN5 (high mobility group nucleosome binding domain 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hmgn5 (high mobility group nucleosome binding domain 5)
Sus scrofa (pig) : HMGN5 (high mobility group nucleosome binding domain 5)
Chlorocebus sabaeus (African green monkey) : HMGN5 (high mobility group nucleosome binding domain 5)
Heterocephalus glaber (naked mole-rat) : Hmgn5 (high mobility group nucleosome binding domain 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X80,134,557 - 80,142,902 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX80,134,557 - 80,142,902 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X80,311,866 - 80,320,211 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX75,355,864 - 75,364,432 (-)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hmgn5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6497694
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.