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Gene: LOC100910755 (RUN and FYVE domain-containing protein 2-like) Rattus norvegicus
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Symbol: LOC100910755
Name: RUN and FYVE domain-containing protein 2-like
Description: Predicted to have metal ion binding activity.
Type: protein-coding
RefSeq Status: MODEL
Also known as: RUN and FYVE domain-containing protein 2
Orthologs:
No known orthologs. homologs ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: LOC100910755 represents a likely duplicate placement of Rufy2 annotated on Rnor_6.0 but not on Rn_Celera (Annotation Release 105). Additionally, annotation of LOC100910755 not supported by synteny in mouse and human. BLASTing LOC100910755 XM_008772949.1 and Rufy2 NM_001168586.1 against the rat genome shows best hits to NC_005119.4 on Rnor_6.0 at locations where LOC100910755 and Rufy2 (GeneID: 690777) are annotated and to AC_000088.1 on Rn_Celera only at location where Rufy2 is annotated (Annotation Release 105). 2-seqence BLAST of Rufy2 NM_001168586.1 against LOC100910755 XM_008772949.1 shows high sequence identity (96% coverage, 99% identity). Rufy2 and most of LOC100910755 are present on the same component AABR07044935.1, with the 3' end of LOC100910755 on component AABR07044934.1. 2-sequence BLAST of AABR07044935.1 against AABR07044934.1 shows 99% identity across a stretch of ~16 kb. [25 Mar 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02027,180,217 - 27,211,779 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2027,181,195 - 27,208,041 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02029,020,755 - 29,052,537 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map20q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations
References - curated

Genomics

QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC100910755
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6497270
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.