Oas1g (2'-5' oligoadenylate synthetase 1G) - Rat Genome Database

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Gene: Oas1g (2'-5' oligoadenylate synthetase 1G) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Oas1g
Name: 2'-5' oligoadenylate synthetase 1G
RGD ID: 6497100
Description: Orthologous to human OAS1 (2'-5'-oligoadenylate synthetase 1).
Type: protein-coding
Previously known as: 2'-5'-oligoadenylate synthase 1A; 2'-5'-oligoadenylate synthase 1A-like; LOC100910735
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01242,343,103 - 42,355,139 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1242,343,123 - 42,355,131 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01244,192,539 - 44,204,579 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map12q16NCBI


References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Position Markers
RH130374  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21235,636,237 - 35,636,429 (+)MAPPERmRatBN7.2
Rnor_6.01242,354,769 - 42,354,960NCBIRnor6.0
Rnor_6.01241,167,135 - 41,167,326NCBIRnor6.0
RGSC_v3.41236,772,467 - 36,772,658UniSTSRGSC3.4
Celera1237,299,719 - 37,299,910UniSTS
RH 3.4 Map12622.3UniSTS
Cytogenetic Map12q16UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003751197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000043279   ⟹   ENSRNOP00000048340
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1242,343,123 - 42,355,131 (+)Ensembl
RefSeq Acc Id: XM_003751197   ⟹   XP_003751245
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01242,343,103 - 42,355,139 (+)NCBI
Rnor_5.01244,192,539 - 44,204,579 (+)NCBI
Sequence:
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698678
Promoter ID:EPDNEW_R9194
Type:initiation region
Name:Oas1g_1
Description:2'-5' oligoadenylate synthetase 1G
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01242,343,163 - 42,343,223EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:6497100 AgrOrtholog
Ensembl Genes ENSRNOG00000037744 Ensembl
NCBI Gene LOC100910735 ENTREZGENE
PhenoGen Oas1g PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-11 Oas1g  2'-5' oligoadenylate synthetase 1G  LOC100910735  2'-5'-oligoadenylate synthase 1A-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-05 LOC100910735  2'-5'-oligoadenylate synthase 1A-like      Symbol and Name status set to provisional 70820 PROVISIONAL