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Gene: LOC100911599 (peroxisome assembly factor 2-like) Rattus norvegicus
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Symbol: LOC100911599
Name: peroxisome assembly factor 2-like
Description:
Type: protein-coding
RefSeq Status: MODEL
Also known as: peroxisome assembly factor 2
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: LOC100911599 (GeneID: 100911599) appears to be a duplicate placement of Pex6 (GeneID: 117265) on Rnor_6.0 (Annot. Release 105) that is absent from Rn_Celera and is not supported by syntenic regions in mouse and human. BLAST analysis of the underlying component AABR07066790.1 against the rat genome shows 99% identity with part of AABR07066800.1, on which Pex6 is annotated. Annotation of Pex6 (GeneID: 117265) at this location on Rnor_6.0 is supported by annotation on Rn_Celera and synteny with mouse and human. [10 Mar 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0916,317,629 - 16,321,553 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0915,233,126 - 15,239,296 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Genomics

QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC100911599
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6492067
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.