LOC100911668 (homeobox protein Hox-A10-like)

Gene: LOC100911668 (homeobox protein Hox-A10-like) Rattus norvegicus

Analyze

Symbol:

LOC100911668

Name:

homeobox protein Hox-A10-like

Description:

ENCODES a protein that exhibits sequence-specific DNA binding (inferred); INVOLVED IN regulation of transcription, DNA-templated (inferred); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

homeobox protein Hox-A10

Orthologs:

No known orthologs.

homologs ...

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Cytogenetic Map	4		NCBI

Annotation (Toggle Annotation Detail/Summary View)

Gene Ontology Annotations

References - curated

Genomics

Position Markers

D7S2774

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,201,047 - 82,201,387	NCBI	Rnor6.0
Rnor_6.0	4	82,286,842 - 82,287,182	NCBI	Rnor6.0
Rnor_5.0	4	146,953,673 - 146,954,013	UniSTS	Rnor5.0
Rnor_5.0	4	146,867,878 - 146,868,218	UniSTS	Rnor5.0
RGSC_v3.4	4	80,532,370 - 80,532,710	UniSTS	RGSC3.4
Celera	4	76,223,112 - 76,223,452	UniSTS
Cytogenetic Map	4	q24	UniSTS

AA893141

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,201,259 - 82,201,465	NCBI	Rnor6.0
Rnor_6.0	4	82,287,054 - 82,287,260	NCBI	Rnor6.0
Rnor_5.0	4	146,953,885 - 146,954,091	UniSTS	Rnor5.0
Rnor_5.0	4	146,868,090 - 146,868,296	UniSTS	Rnor5.0
RGSC_v3.4	4	80,532,582 - 80,532,788	UniSTS	RGSC3.4
Celera	4	76,223,324 - 76,223,530	UniSTS
Cytogenetic Map	4	q24	UniSTS
RH 3.4 Map	4	513.31	UniSTS

PMC140663P1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	4	146,870,518 - 146,870,931	NCBI	Rnor5.0
RGSC_v3.4	4	80,534,674 - 80,535,152	UniSTS	RGSC3.4
Celera	4	76,225,416 - 76,225,862	UniSTS

ECD00308

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,200,584 - 82,201,491	NCBI	Rnor6.0
Rnor_6.0	4	82,286,379 - 82,287,286	NCBI	Rnor6.0
Rnor_5.0	4	146,953,210 - 146,954,117	UniSTS	Rnor5.0
Rnor_5.0	4	146,867,415 - 146,868,322	UniSTS	Rnor5.0
RGSC_v3.4	4	80,531,907 - 80,532,814	UniSTS	RGSC3.4
Celera	4	76,222,649 - 76,223,556	UniSTS

ECD00416

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,201,552 - 82,202,453	NCBI	Rnor6.0
Rnor_6.0	4	82,287,347 - 82,288,248	NCBI	Rnor6.0
Rnor_5.0	4	146,954,178 - 146,955,079	UniSTS	Rnor5.0
Rnor_5.0	4	146,868,383 - 146,869,284	UniSTS	Rnor5.0
RGSC_v3.4	4	80,532,875 - 80,533,776	UniSTS	RGSC3.4
Celera	4	76,223,617 - 76,224,518	UniSTS

REN100619

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,194,523 - 82,194,769	NCBI	Rnor6.0
Rnor_6.0	4	82,280,318 - 82,280,564	NCBI	Rnor6.0
Rnor_5.0	4	146,947,149 - 146,947,395	UniSTS	Rnor5.0
Rnor_5.0	4	146,861,354 - 146,861,600	UniSTS	Rnor5.0
RGSC_v3.4	4	80,525,846 - 80,526,092	UniSTS	RGSC3.4
Celera	4	76,216,656 - 76,216,902	UniSTS
Cytogenetic Map	4	q24	UniSTS

REN100620

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,194,750 - 82,195,005	NCBI	Rnor6.0
Rnor_6.0	4	82,280,545 - 82,280,800	NCBI	Rnor6.0
Rnor_5.0	4	146,947,376 - 146,947,631	UniSTS	Rnor5.0
Rnor_5.0	4	146,861,581 - 146,861,836	UniSTS	Rnor5.0
RGSC_v3.4	4	80,526,073 - 80,526,328	UniSTS	RGSC3.4
Celera	4	76,216,883 - 76,217,138	UniSTS
Cytogenetic Map	4	q24	UniSTS

REN100658

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,204,032 - 82,204,258	NCBI	Rnor6.0
Rnor_6.0	4	82,289,556 - 82,289,782	NCBI	Rnor6.0
Rnor_5.0	4	146,956,387 - 146,956,613	UniSTS	Rnor5.0
Rnor_5.0	4	146,870,863 - 146,871,089	UniSTS	Rnor5.0
RGSC_v3.4	4	80,535,084 - 80,535,310	UniSTS	RGSC3.4
Celera	4	76,225,794 - 76,226,020	UniSTS

REN100642

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,199,906 - 82,200,138	NCBI	Rnor6.0
Rnor_6.0	4	82,285,701 - 82,285,933	NCBI	Rnor6.0
Rnor_5.0	4	146,952,532 - 146,952,764	UniSTS	Rnor5.0
Rnor_5.0	4	146,866,737 - 146,866,969	UniSTS	Rnor5.0
RGSC_v3.4	4	80,531,229 - 80,531,461	UniSTS	RGSC3.4
Celera	4	76,221,971 - 76,222,203	UniSTS

REN100659

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,204,240 - 82,204,493	NCBI	Rnor6.0
Rnor_6.0	4	82,289,764 - 82,290,017	NCBI	Rnor6.0
Rnor_5.0	4	146,956,595 - 146,956,848	UniSTS	Rnor5.0
Rnor_5.0	4	146,871,071 - 146,871,324	UniSTS	Rnor5.0
RGSC_v3.4	4	80,535,292 - 80,535,545	UniSTS	RGSC3.4
Celera	4	76,226,002 - 76,226,255	UniSTS

Hoxa10

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,201,562 - 82,203,098	NCBI	Rnor6.0
Rnor_6.0	4	82,287,357 - 82,288,893	NCBI	Rnor6.0
Rnor_5.0	4	146,954,188 - 146,955,724	UniSTS	Rnor5.0
Rnor_5.0	4	146,868,393 - 146,869,929	UniSTS	Rnor5.0
RGSC_v3.4	4	80,532,885 - 80,534,421	UniSTS	RGSC3.4
Celera	4	76,223,627 - 76,225,163	UniSTS

Hoxa9

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,192,999 - 82,194,398	NCBI	Rnor6.0
Rnor_6.0	4	82,278,794 - 82,280,193	NCBI	Rnor6.0
Rnor_5.0	4	146,945,625 - 146,947,024	UniSTS	Rnor5.0
Rnor_5.0	4	146,859,830 - 146,861,229	UniSTS	Rnor5.0
RGSC_v3.4	4	80,524,322 - 80,525,721	UniSTS	RGSC3.4
Celera	4	76,215,136 - 76,216,531	UniSTS
Cytogenetic Map	4	q24	UniSTS

Hoxa10

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Celera	4	76,225,387 - 76,225,462	UniSTS

Hoxa9

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	4	82,194,725 - 82,194,791	NCBI	Rnor6.0
Rnor_6.0	4	82,280,520 - 82,280,586	NCBI	Rnor6.0
Rnor_5.0	4	146,861,556 - 146,861,622	UniSTS	Rnor5.0
Rnor_5.0	4	146,947,351 - 146,947,417	UniSTS	Rnor5.0
Celera	4	76,216,858 - 76,216,924	UniSTS
Cytogenetic Map	4	q24	UniSTS

Sequence

Nucleotide Sequences

Protein Sequences

Transcriptome

Additional Information

External Database Links

Nomenclature History

More on LOC100911668
	Alliance Gene
	NCBI Gene
	Ensembl Gene
	NCBI Genome Data Viewer

RGD Object Information
RGD ID:	6491746
Created:	2012-07-05
Species:	Rattus norvegicus
Last Modified:	2019-08-20
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)