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Gene: Rps27a (ribosomal protein S27a) Rattus norvegicus
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Symbol: Rps27a
Name: ribosomal protein S27a
RGD ID: 6489478
Description: Predicted to have protein tag and ubiquitin protein ligase binding activity. Predicted to be involved in modification-dependent protein catabolic process and protein ubiquitination. Localizes to cytosolic small ribosomal subunit. Orthologous to human RPS27A (ribosomal protein S27a); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC100912032; ubiquitin carboxyl extension protein 80; ubiquitin-40S ribosomal protein S27a; ubiquitin-40S ribosomal protein S27a-like
Orthologs:
Homo sapiens (human) : RPS27A (ribosomal protein S27a)  HGNC  Alliance
Mus musculus (house mouse) : Rps27a (ribosomal protein S27A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rps27a (ribosomal protein S27a)
Pan paniscus (bonobo/pygmy chimpanzee) : RPS27A (ribosomal protein S27a)
Canis lupus familiaris (dog) : RPS27A (ribosomal protein S27a)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rps27a (ribosomal protein S27a)
Sus scrofa (pig) : RPS27A (ribosomal protein S27a)
Chlorocebus sabaeus (African green monkey) : RPS27A (ribosomal protein S27a)
Heterocephalus glaber (naked mole-rat) : Rps27a (ribosomal protein S27a)
more info ...
Related Pseudogenes: LOC105650978   Rps27a-ps1   Rps27a-ps10   Rps27a-ps11   Rps27a-ps13   Rps27a-ps14   Rps27a-ps15   Rps27a-ps16   Rps27a-ps17   Rps27a-ps18   Rps27a-ps19   Rps27a-ps2   Rps27a-ps20   Rps27a-ps21   Rps27a-ps22   Rps27a-ps23   Rps27a-ps24   Rps27a-ps25   Rps27a-ps26   Rps27a-ps27   Rps27a-ps28   Rps27a-ps29   Rps27a-ps3   Rps27a-ps30   Rps27a-ps4   Rps27a-ps5   Rps27a-ps6   Rps27a-ps7   Rps27a-ps8   Rps27a-ps9   Ubbp4  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.014113,966,163 - 113,968,440 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14113,966,611 - 113,968,268 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl5138,628,482 - 138,629,026 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014113,632,952 - 113,634,814 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera14102,162,278 - 102,164,555 (-)NCBICelera
Cytogenetic Map14q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rps27a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6489478
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.