Fbl-ps2 (fibrillarin, pseudogene 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Fbl-ps2 (fibrillarin, pseudogene 2) Rattus norvegicus
Analyze
Symbol: Fbl-ps2
Name: fibrillarin, pseudogene 2
RGD ID: 6488677
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: hypothetical protein LOC679723; LOC100912130; LOC679723; rRNA 2'-O-methyltransferase fibrillarin-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814107,260,005 - 107,262,379 (-)NCBIGRCr8
mRatBN7.214103,059,089 - 103,061,463 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.014113,726,929 - 113,729,362 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.014113,394,139 - 113,396,572 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414110,331,600 - 110,333,897 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera14101,940,866 - 101,943,241 (-)NCBICelera
Cytogenetic Map14q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Fbl-ps2
16 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-14654 BioCyc
NCBI Gene LOC100912130 ENTREZGENE
PhenoGen Fbl-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Fbl-ps2  fibrillarin, pseudogene 2  LOC100912130  rRNA 2'-O-methyltransferase fibrillarin-like  Symbol and Name Changed 1299863 APPROVED
2015-07-29 LOC100912130  rRNA 2'-O-methyltransferase fibrillarin-like  LOC679723  hypothetical protein LOC679723  Data merged from RGD:1584818 737654 PROVISIONAL
2012-07-05 LOC100912130  rRNA 2'-O-methyltransferase fibrillarin-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC679723  hypothetical protein LOC679723      Symbol and Name status set to provisional 70820 PROVISIONAL