Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: LOC100912195 (protein BEX1-like) Rattus norvegicus
Analyze
Symbol: LOC100912195
Name: protein BEX1-like
Description: Predicted to be involved in axon regeneration. Predicted to localize to the cytoplasm and nucleus. Orthologous to several human genes including BEX1 (brain expressed X-linked 1) and BEX2 (brain expressed X-linked 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog); aflatoxin B1 (ortholog); belinostat (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100361937
Orthologs:
Homo sapiens (human) : BEX5 (brain expressed X-linked 5)  HGNC  Alliance
Mus musculus (house mouse) : Bex1 (brain expressed X-linked 1)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : BEX5 (brain expressed X-linked 5)
Canis lupus familiaris (dog) : BEX5 (brain expressed X-linked 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Bex5 (brain expressed X-linked 5)
Sus scrofa (pig) : BEX5 (brain expressed X-linked 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01116,565,779 - 116,567,283 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01117,724,191 - 117,725,657 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41110,708,014 - 110,708,403 (-)NCBIRGSC3.4rn4RGSC3.4
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
  
More on LOC100912195
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6488322
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



Contact Us |  About Us |  License CC BY 4.0 |  Legal Disclaimer |  © Medical College of Wisconsin
NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.