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Gene: Tcaf2 (TRPM8 channel-associated factor 2) Rattus norvegicus
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Symbol: Tcaf2
Name: TRPM8 channel-associated factor 2
Description: Predicted to have ion channel binding activity. Predicted to be involved in several processes, including hematopoietic progenitor cell differentiation; negative regulation of anion channel activity; and positive regulation of protein targeting to membrane. Predicted to localize to cell junction and plasma membrane. Orthologous to human TCAF2 (TRPM8 channel associated factor 2); INTERACTS WITH endosulfan; tetrachloromethane; (+)-catechin (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100912372; LOC100912416; protein FAM115C-like; TRPM8 channel-associated factor 2-like
Orthologs:
Homo sapiens (human) : TCAF2 (TRPM8 channel associated factor 2)  HGNC  Alliance
Mus musculus (house mouse) : Tcaf2 (TRPM8 channel-associated factor 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcaf2 (TRPM8 channel associated factor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TCAF2 (TRPM8 channel associated factor 2)
Canis lupus familiaris (dog) : TCAF2 (TRPM8 channel associated factor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcaf2 (TRPM8 channel associated factor 2)
Sus scrofa (pig) : LOC110257570 (TRPM8 channel-associated factor 2-like)
Chlorocebus sabaeus (African green monkey) : TCAF2 (TRPM8 channel associated factor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0471,177,974 - 71,196,286 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl471,206,876 - 71,229,575 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04135,970,128 - 135,988,378 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map4q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tcaf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 6487302
Created: 2012-07-05
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.