D14Ertd670e (DNA segment, Chr 14, ERATO Doi 670, expressed) - Rat Genome Database

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Gene: D14Ertd670e (DNA segment, Chr 14, ERATO Doi 670, expressed) Mus musculus
Analyze
Symbol: D14Ertd670e
Name: DNA segment, Chr 14, ERATO Doi 670, expressed
RGD ID: 6484209
MGI Page MGI
Description: INTERACTS WITH folic acid
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391419,888,993 - 19,894,745 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1419,888,993 - 19,894,745 (+)EnsemblGRCm39 Ensembl
GRCm381419,838,925 - 19,844,677 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1419,838,925 - 19,844,677 (+)EnsemblGRCm38mm10GRCm38
Celera1416,221,931 - 16,227,689 (+)NCBICelera
Cytogenetic Map14A3NCBI
cM Map145.0ENTREZGENE
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
folic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10725249   PMID:10922068  


Genomics

Variants

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Variants in D14Ertd670e
212 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412071Ssen3_msuseptibility to Sendai virus 3 (mouse)Not determined14126987934Mouse
11532711Sluc40_msusceptibility to lung cancer 40 (mouse)14127379943Mouse
1301991Wta3_mweight adult 3 (mouse)Not determined14388747337887650Mouse
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined514347339143596Mouse
4141265Appd2_mAPP associated premature death 2 (mouse)Not determined14594555230114862Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse

Markers in Region
AU015506  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381419,844,470 - 19,844,672UniSTSGRCm38
MGSCv371420,663,692 - 20,663,894UniSTSGRCm37
Celera1416,227,482 - 16,227,684UniSTS
Cytogenetic Map14A3UniSTS
cM Map145.0UniSTS
Whitehead/MRC_RH1437.2UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000225736
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1419,888,993 - 19,894,745 (+)Ensembl
GRCm38.p6 Ensembl1419,838,925 - 19,844,677 (+)Ensembl
RefSeq Acc Id: NR_105025
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391419,888,993 - 19,894,745 (+)NCBI
GRCm381419,838,925 - 19,844,677 (+)NCBI
Celera1416,221,931 - 16,227,689 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000114350 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000225736 ENTREZGENE
MGD MGI:1277153 ENTREZGENE
NCBI Gene D14Ertd670e ENTREZGENE
PhenoGen D14Ertd670e PhenoGen
RNAcentral URS000075AFD1 RNACentral