Tmppe (transmembrane protein with metallophosphoesterase domain) - Rat Genome Database

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Gene: Tmppe (transmembrane protein with metallophosphoesterase domain) Mus musculus
Analyze
Symbol: Tmppe
Name: transmembrane protein with metallophosphoesterase domain
RGD ID: 6483301
MGI Page MGI
Description: Orthologous to human TMPPE (transmembrane protein with metallophosphoesterase domain).
Type: protein-coding
RefSeq Status: VALIDATED
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399114,230,163 - 114,240,269 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9114,230,173 - 114,236,344 (+)EnsemblGRCm39 Ensembl
GRCm389114,401,095 - 114,411,201 (+)ENTREZGENEGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9114,401,105 - 114,407,276 (+)EnsemblGRCm38mm10GRCm38
MGSCv379114,310,631 - 114,317,111 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera9114,873,252 - 114,879,770 (+)NCBICelera
Cytogenetic Map9F3NCBI
cM Map964.4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:14691545   PMID:16141072   PMID:16141073   PMID:21873635  


Genomics

Comparative Map Data
Tmppe
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399114,230,163 - 114,240,269 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9114,230,173 - 114,236,344 (+)EnsemblGRCm39 Ensembl
GRCm389114,401,095 - 114,411,201 (+)ENTREZGENEGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9114,401,105 - 114,407,276 (+)EnsemblGRCm38mm10GRCm38
MGSCv379114,310,631 - 114,317,111 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera9114,873,252 - 114,879,770 (+)NCBICelera
Cytogenetic Map9F3NCBI
cM Map964.4NCBI
TMPPE
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38333,090,422 - 33,097,146 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl333,090,421 - 33,097,146 (-)EnsemblGRCh38hg38GRCh38
GRCh37333,131,914 - 33,138,638 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36333,106,921 - 33,113,297 (-)NCBINCBI36Build 36hg18NCBI36
Celera333,074,968 - 33,081,352 (-)NCBICelera
Cytogenetic Map3p22.3NCBI
HuRef333,071,883 - 33,078,266 (-)NCBIHuRef
CHM1_1333,081,960 - 33,088,343 (-)NCBICHM1_1
T2T-CHM13v2.0333,092,195 - 33,098,917 (-)NCBIT2T-CHM13v2.0
Tmppe
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88122,963,707 - 122,971,594 (+)NCBIGRCr8
mRatBN7.28114,085,497 - 114,093,388 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8114,084,831 - 114,094,286 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8119,702,263 - 119,710,123 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08117,901,523 - 117,909,389 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08115,744,304 - 115,752,178 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08122,439,679 - 122,447,208 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08121,752,343 - 121,760,062 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera8113,332,400 - 113,337,689 (+)NCBICelera
Cytogenetic Map8q32NCBI
Tmppe
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955421342,631 - 346,581 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955421342,631 - 346,581 (-)NCBIChiLan1.0ChiLan1.0
TMPPE
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2233,068,880 - 33,082,701 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1333,073,644 - 33,087,466 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0333,024,623 - 33,031,877 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1333,327,829 - 33,336,778 (-)NCBIpanpan1.1PanPan1.1panPan2
TMPPE
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1233,733,979 - 3,735,884 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha233,776,653 - 3,780,248 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0233,992,464 - 3,996,100 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl233,992,236 - 3,999,473 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1233,827,166 - 3,830,797 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0233,954,481 - 3,958,103 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0233,928,574 - 3,931,725 (+)NCBIUU_Cfam_GSD_1.0
Tmppe
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118190,295,828 - 190,301,342 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493647323,435,933 - 23,440,173 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMPPE
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1318,969,682 - 18,978,997 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11318,972,108 - 18,978,908 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TMPPE
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11577,586,831 - 77,591,946 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604150,964,023 - 50,971,321 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmppe
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478811,106,387 - 11,110,482 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478811,102,842 - 11,110,776 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tmppe
263 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2083
Count of miRNA genes:812
Interacting mature miRNAs:1048
Transcripts:ENSMUST00000111820
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975682646114303447Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975682646114303447Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981680321115680445Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982792386116792481Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982792386116792481Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982792386116792481Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984406017118406120Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986107600120107729Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986121898120118690Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989859058118767089Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
1301484Bwq6_mbody weight (mouse)Not determined993591658124359700Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993591658124359700Mouse
14746992Manh67_mmandible shape 67 (mouse)993865836124359700Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996746658124359700Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9100889929124359700Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9101829255124359700Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9101829255124359700Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103118511124359700Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103118511124359700Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103118511124359700Mouse
13515058Adip20d_madiposity 20d (mouse)9108744078118744078Mouse

Markers in Region
AW125515  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389114,411,033 - 114,411,135UniSTSGRCm38
MGSCv379114,320,151 - 114,320,253UniSTSGRCm37
Celera9114,882,806 - 114,882,908UniSTS
Cytogenetic Map9F3UniSTS
cM Map966.0UniSTS
Whitehead/MRC_RH91135.24UniSTS
UniSTS:236270  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389114,410,552 - 114,410,864UniSTSGRCm38
MGSCv379114,319,670 - 114,319,982UniSTSGRCm37
Celera9114,882,325 - 114,882,637UniSTS
Cytogenetic Map9F3UniSTS
cM Map966.0UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000111820   ⟹   ENSMUSP00000107451
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9114,230,173 - 114,236,344 (+)Ensembl
GRCm38.p6 Ensembl9114,401,105 - 114,407,276 (+)Ensembl
RefSeq Acc Id: NM_001200002   ⟹   NP_001186931
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399114,230,163 - 114,240,269 (+)NCBI
GRCm389114,401,095 - 114,411,201 (+)ENTREZGENE
Celera9114,872,834 - 114,882,974 (+)ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001186931 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000107451
  ENSMUSP00000107451.3
RefSeq Acc Id: NP_001186931   ⟸   NM_001200002
- UniProtKB: D3Z286 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000107451   ⟸   ENSMUST00000111820
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z286-F1-model_v2 AlphaFold D3Z286 1-447 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:5317335 AgrOrtholog
Ensembl Genes ENSMUSG00000079260 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000111820 ENTREZGENE
  ENSMUST00000111820.4 UniProtKB/TrEMBL
Gene3D-CATH 3.60.21.10 UniProtKB/TrEMBL
InterPro Metallo-depent_PP-like UniProtKB/TrEMBL
  Metallo_PEstase_dom UniProtKB/TrEMBL
KEGG Report mmu:100504715 UniProtKB/TrEMBL
MGD MGI:5317335 ENTREZGENE
NCBI Gene Tmppe ENTREZGENE
PANTHER TRANSMEMBRANE PROTEIN WITH METALLOPHOSPHOESTERASE DOMAIN UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN WITH METALLOPHOSPHOESTERASE DOMAIN-RELATED UniProtKB/TrEMBL
Pfam Metallophos UniProtKB/TrEMBL
PhenoGen Tmppe PhenoGen
Superfamily-SCOP SSF56300 UniProtKB/TrEMBL
UniProt D3Z286 ENTREZGENE, UniProtKB/TrEMBL