LAP3P1 (leucine aminopeptidase 3 pseudogene 1) - Rat Genome Database

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Gene: LAP3P1 (leucine aminopeptidase 3 pseudogene 1) Homo sapiens
Analyze
Symbol: LAP3P1
Name: leucine aminopeptidase 3 pseudogene 1
RGD ID: 6482762
HGNC Page HGNC:42364
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: LAP3  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38682,924,827 - 82,925,122 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl682,924,829 - 82,925,122 (-)EnsemblGRCh38hg38GRCh38
GRCh37683,634,546 - 83,634,841 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map6q14.1NCBI
HuRef680,862,417 - 80,862,712 (-)NCBIHuRef
CHM1_1683,732,215 - 83,732,510 (-)NCBICHM1_1
T2T-CHM13v2.0684,144,402 - 84,144,697 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:50
Count of miRNA genes:49
Interacting mature miRNAs:50
Transcripts:ENST00000403648
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1
Low 28 18 20 5 118 5 61 31 43 3 27 32 4 29
Below cutoff 286 161 220 65 170 39 566 157 316 62 195 263 30 145 307 3

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000403648
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl682,924,829 - 82,925,122 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC LAP3P1 COSMIC
Ensembl Genes ENSG00000220091 Ensembl, ENTREZGENE
GTEx ENSG00000220091 GTEx
HGNC ID HGNC:42364 ENTREZGENE
Human Proteome Map LAP3P1 Human Proteome Map
NCBI Gene LAP3P1 ENTREZGENE