CFL1P8 (cofilin 1 pseudogene 8) - Rat Genome Database

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Gene: CFL1P8 (cofilin 1 pseudogene 8) Homo sapiens
Analyze
Symbol: CFL1P8
Name: cofilin 1 pseudogene 8
RGD ID: 6481574
HGNC Page HGNC:39960
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: CFL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381399,582,708 - 99,583,166 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1399,582,706 - 99,583,180 (+)EnsemblGRCh38hg38GRCh38
GRCh3713100,234,962 - 100,235,420 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map13q32.3NCBI
HuRef1380,829,703 - 80,830,160 (+)NCBIHuRef
CHM1_113100,204,872 - 100,205,330 (+)NCBICHM1_1
T2T-CHM13v2.01398,793,590 - 98,794,048 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:306
Count of miRNA genes:285
Interacting mature miRNAs:301
Transcripts:ENST00000436148
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 1 1 1 11 1 1 6 4 200 7
Below cutoff 78 70 97 44 68 43 100 64 407 38 240 59 3 21 65

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000436148
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1399,582,706 - 99,583,180 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC CFL1P8 COSMIC
Ensembl Genes ENSG00000234239 Ensembl, ENTREZGENE
GTEx ENSG00000234239 GTEx
HGNC ID HGNC:39960 ENTREZGENE
Human Proteome Map CFL1P8 Human Proteome Map
NCBI Gene CFL1P8 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-26 CFL1P8  cofilin 1 pseudogene 8    cofilin 1 (non-muscle) pseudogene 8  Symbol and/or name change 5135510 APPROVED