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Gene: Cacna1b (calcium voltage-gated channel subunit alpha1 B) Rattus norvegicus

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Symbol:

Cacna1b

Name:

calcium voltage-gated channel subunit alpha1 B

RGD ID:

628852

Description:

Enables high voltage-gated calcium channel activity; protein phosphatase 2A binding activity; and voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels. Involved in several processes, including calcium ion import; regulation of calcium-dependent activation of synaptic vesicle fusion; and response to phorbol 13-acetate 12-myristate. Located in axon terminus; dendritic shaft; and neuronal cell body. Part of protein-containing complex. Is active in Schaffer collateral - CA1 synapse and glutamatergic synapse. Human ortholog(s) of this gene implicated in Lambert-Eaton myasthenic syndrome. Orthologous to human CACNA1B (calcium voltage-gated channel subunit alpha1 B); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; mitogen activated protein kinase signaling pathway; INTERACTS WITH 1,2-dimethylhydrazine; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

BIII; brain calcium channel III; calcium channel, L type, alpha-1 polypeptide; calcium channel, voltage-dependent, N type, alpha 1B subunit; LOC102553311; voltage gated N-type calcium channel Ca(v)2.2; voltage-dependent N-type calcium channel subunit alpha-1B; voltage-dependent N-type calcium channel subunit alpha-1B-like; voltage-gated calcium channel subunit alpha Cav2.2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI		GRCr8
mRatBN7.2	3	7,380,892 - 7,546,104 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	7,380,922 - 7,546,091 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	10,484,372 - 10,649,772 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	19,070,601 - 19,236,001 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	17,260,424 - 17,425,831 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	1,740,026 - 1,924,959 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	1,740,024 - 1,924,827 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	1,727,915 - 1,910,475 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	2,842,948 - 3,039,747 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	2,873,390 - 3,039,747 (-)	NCBI
Celera	3	2,215,805 - 2,379,072 (-)	NCBI		Celera
Cytogenetic Map	3	p13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Adams-Oliver Syndrome 5 (ISO)

autosomal dominant intellectual developmental disorder 8 (ISO)

brain edema (ISO)

developmental and epileptic encephalopathy 14 (ISO)

Diabetic Nephropathies (ISO)

dystonia 23 (ISO)

epilepsy (ISO)

Experimental Autoimmune Encephalomyelitis (IEP)

Hyperalgesia (IDA)

Joubert syndrome 1 (ISO)

Kleefstra syndrome 1 (ISO)

Lambert-Eaton myasthenic syndrome (ISO)

multiple sclerosis (ISO)

Neurodevelopmental Disorder with Seizures and Nonepileptic Hyperkinetic Movements (ISO)

peripheral nervous system disease (ISO)

primary coenzyme Q10 deficiency 7 (ISO)

Rafiq syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-pilocarpine (ISO)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

ammonium chloride (EXP)

atrazine (ISO)

barium(0) (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

cadmium dichloride (EXP,ISO)

calcium atom (EXP)

calcium(0) (EXP)

CGP 52608 (ISO)

choline (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

DDE (EXP)

dibenzofurans (ISO)

dibutyl phthalate (EXP)

dichlorine (EXP)

diclofenac (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

epoxiconazole (EXP)

ethanol (ISO)

ethylparaben (ISO)

fenvalerate (EXP)

folic acid (ISO)

gabapentin (EXP)

gamma-aminobutyric acid (EXP)

gentamycin (EXP)

L-methionine (ISO)

lead diacetate (ISO)

linuron (EXP)

methoxychlor (EXP)

N-methyl-D-aspartic acid (ISO)

N-nitrosodiethylamine (ISO)

nitric oxide (EXP)

Nor-9-carboxy-delta9-THC (ISO)

ozone (EXP,ISO)

p-menthan-3-ol (ISO)

paracetamol (EXP)

phenylmercury acetate (ISO)

potassium chloride (EXP)

prochloraz (EXP)

procymidone (EXP)

propanal (ISO)

SB 431542 (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

streptozocin (ISO)

succimer (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium ion import (IMP)

calcium ion import across plasma membrane (IBA)

calcium ion transmembrane transport (IEA,ISO)

calcium ion transport (IEA,IMP,ISO)

establishment of localization in cell (ISO)

locomotory behavior (ISO)

modulation of chemical synaptic transmission (ISO)

monoatomic ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

neurotransmitter secretion (ISO)

optic nerve development (IEP)

positive regulation of calcium ion-dependent exocytosis of neurotransmitter (IMP)

positive regulation of neurotransmitter secretion (IMP)

regulation of blood pressure (ISO)

regulation of calcium ion transport (ISO)

regulation of calcium-dependent activation of synaptic vesicle fusion (EXP,IDA)

regulation of heart contraction (ISO)

regulation of presynaptic cytosolic calcium ion concentration (IEA)

response to amyloid-beta (ISO)

response to ethanol (IEP)

response to pain (ISO)

response to phorbol 13-acetate 12-myristate (IDA)

response to testosterone (IMP)

transmembrane transport (IEA)

Cellular Component

axon terminus (IDA)

basolateral plasma membrane (ISO)

dendrite (ISO)

dendritic shaft (IDA)

glutamatergic synapse (EXP,IDA)

membrane (IEA,ISO)

monoatomic ion channel complex (IEA)

neuron projection terminus (ISO)

neuronal cell body (IBA,IDA,ISO)

presynaptic active zone (ISO)

protein-containing complex (IDA,IEA)

Schaffer collateral - CA1 synapse (EXP,IDA)

somatodendritic compartment (IEA)

stereocilium membrane (ISO)

voltage-gated calcium channel complex (IBA,IEA,ISO)

Molecular Function

ATP binding (IEA)

calcium channel activity (IEA)

calcium ion binding (IEA)

high voltage-gated calcium channel activity (IDA,ISO)

metal ion binding (IEA)

monoatomic ion channel activity (IEA)

nucleotide binding (IEA)

protein binding (IPI,ISO)

protein phosphatase 2A binding (IPI)

voltage-gated calcium channel activity (IDA,IEA,IMP,ISO)

voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (EXP,IDA)

Molecular Pathway Annotations Click to see Annotation Detail View

calcium transport pathway (ISO)

calcium/calcium-mediated signaling pathway (IEA,ISO)

mitogen activated protein kinase signaling pathway (IEA)

type 2 diabetes mellitus pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Differential role of N-type calcium channel splice isoforms in pain.	Altier C, etal., J Neurosci. 2007 Jun 13;27(24):6363-73.
2.	BKCa-Cav channel complexes mediate rapid and localized Ca2+-activated K+ signaling.	Berkefeld H, etal., Science. 2006 Oct 27;314(5799):615-20.
3.	An atypical role for collapsin response mediator protein 2 (CRMP-2) in neurotransmitter release via interaction with presynaptic voltage-gated calcium channels.	Brittain JM, etal., J Biol Chem. 2009 Nov 6;284(45):31375-90. Epub 2009 Sep 15.
4.	Voltage-gated calcium channels.	Catterall WA Cold Spring Harb Perspect Biol. 2011 Aug 1;3(8):a003947. doi: 10.1101/cshperspect.a003947.
5.	Delineation of the oligomerization, AP-2 binding, and synprint binding region of the C2B domain of synaptotagmin.	Chapman ER, etal., J Biol Chem. 1998 Dec 4;273(49):32966-72.
6.	Molecular cloning of the alpha-1 subunit of an omega-conotoxin-sensitive calcium channel.	Dubel SJ, etal., Proc Natl Acad Sci U S A 1992 Jun 1;89(11):5058-62.
7.	Inhibitory role of Ser-425 of the alpha1 2.2 subunit in the enhancement of Cav 2.2 currents by phorbol-12-myristate, 13-acetate.	Fang H, etal., J Biol Chem. 2006 Jul 21;281(29):20011-7. Epub 2006 May 16.
8.	Human neuronal changes in brain edema and increased intracranial pressure.	Faragó N, etal., Acta Neuropathol Commun. 2016 Aug 4;4(1):78. doi: 10.1186/s40478-016-0356-x.
9.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
10.	Coexpression of high-voltage-activated ion channels Kv3.4 and Cav1.2 in pioneer axons during pathfinding in the developing rat forebrain.	Huang CY, etal., J Comp Neurol. 2012 Nov 1;520(16):3650-72. doi: 10.1002/cne.23119.
11.	A proteomic screen for presynaptic terminal N-type calcium channel (CaV2.2) binding partners.	Khanna R, etal., J Biochem Mol Biol. 2007 May 31;40(3):302-14.
12.	Balance of calcineurin Aa and CDK5 activities sets release probability at nerve terminals.	Kim SH and Ryan TA, J Neurosci. 2013 May 22;33(21):8937-50. doi: 10.1523/JNEUROSCI.4288-12.2013.
13.	Distribution of a calcium channel subunit in dystrophic axons in multiple sclerosis and experimental autoimmune encephalomyelitis.	Kornek B, etal., Brain. 2001 Jun;124(Pt 6):1114-24.
14.	Expression of voltage-gated Ca2+ channel subtypes in cultured astrocytes.	Latour I, etal., Glia 2003 Mar;41(4):347-53.
15.	Novel omega-conotoxins from Conus catus discriminate among neuronal calcium channel subtypes.	Lewis RJ, etal., J Biol Chem. 2000 Nov 10;275(45):35335-44.
16.	A protein phosphatase 2calpha-Ca2+ channel complex for dephosphorylation of neuronal Ca2+ channels phosphorylated by protein kinase C.	Li D, etal., J Neurosci. 2005 Feb 23;25(8):1914-23.
17.	Identification of functionally distinct isoforms of the N-type Ca2+ channel in rat sympathetic ganglia and brain.	Lin Z, etal., Neuron 1997 Jan;18(1):153-66.
18.	Neurotransmitter modulation of small-conductance Ca2+-activated K+ channels by regulation of Ca2+ gating.	Maingret F, etal., Neuron. 2008 Aug 14;59(3):439-49. doi: 10.1016/j.neuron.2008.05.026.
19.	Phoneutria nigriventer omega-Phonetoxin IIA: a new tool for anti-calcium channel autoantibody assays in Lambert-Eaton myasthenic syndrome.	Martin-Moutot N, etal., Neurobiol Dis. 2006 Apr;22(1):57-63. Epub 2005 Nov 11.
20.	Synaptic targeting of N-type calcium channels in hippocampal neurons.	Maximov A and Bezprozvanny I, J Neurosci 2002 Aug 15;22(16):6939-52.
21.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
22.	Voltage-gated calcium channels in adult rat inferior colliculus neurons.	N'Gouemo P and Morad M, Neuroscience 2003;120(3):815-26.
23.	Ethanol withdrawal is accompanied by downregulation of calcium channel alpha 1B subunit in rat inferior colliculus neurons.	N'Gouemo P, etal., Brain Res. 2006 Sep 7;1108(1):216-20. Epub 2006 Jul 24.
24.	Testosterone modulates Ca(v2.2) calcium channels' functional expression at rat levator ani neuromuscular junction.	Nudler SI, etal., Neuroscience. 2005;134(3):817-26.
25.	Ablation of the N-type calcium channel ameliorates diabetic nephropathy with improved glycemic control and reduced blood pressure.	Ohno S, etal., Sci Rep. 2016 Jun 7;6:27192. doi: 10.1038/srep27192.
26.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
27.	Alternative splicing in the cytoplasmic II-III loop of the N-type Ca channel alpha 1B subunit: functional differences are beta subunit-specific.	Pan JQ and Lipscombe D, J Neurosci 2000 Jul 1;20(13):4769-75.
28.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
29.	GOA pipeline	RGD automated data pipeline
30.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
31.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
32.	Presynaptic Cav2.1 and Cav2.2 differentially influence release dynamics at hippocampal excitatory synapses.	Scheuber A, etal., J Neurosci. 2004 Nov 17;24(46):10402-9.
33.	Role of spinal Cav2.2 and Cav2.1 ion channels in bladder nociception.	Su X, etal., J Urol. 2008 Jun;179(6):2464-9. doi: 10.1016/j.juro.2008.01.088. Epub 2008 Apr 23.
34.	Roles of N-type and Q-type Ca2+ channels in supporting hippocampal synaptic transmission.	Wheeler DB, etal., Science. 1994 Apr 1;264(5155):107-11.
35.	Differential distribution of voltage-gated calcium channels in dopaminergic neurons of the rat retina.	Witkovsky P, etal., J Comp Neurol. 2006 Jul 20;497(3):384-96.

Additional References at PubMed

PMID:1692134	PMID:7509046	PMID:8125957	PMID:10328888	PMID:10377343	PMID:11036064	PMID:11160515	PMID:11296258	PMID:11438518	PMID:11567049	PMID:12074836	PMID:12827191
PMID:12890773	PMID:14715140	PMID:15451373	PMID:15768038	PMID:16049174	PMID:16760341	PMID:17293861	PMID:17686036	PMID:17686037	PMID:18054859	PMID:18971475	PMID:19125229
PMID:19364492	PMID:20181083	PMID:20511524	PMID:21233207	PMID:21521766	PMID:21763275	PMID:22871113	PMID:23022559	PMID:23376566	PMID:23396054	PMID:23648579	PMID:23807706
PMID:24513289	PMID:24566975	PMID:24646700	PMID:24889613	PMID:25878262	PMID:25966687	PMID:26283199	PMID:26507659	PMID:27489103	PMID:28837380	PMID:28957379	PMID:29198756
PMID:29208674	PMID:29335317	PMID:29341826	PMID:29436604	PMID:31359322	PMID:31775826	PMID:31923392	PMID:33360835	PMID:35341732

Genomics

Comparative Map Data

Cacna1b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI		GRCr8
mRatBN7.2	3	7,380,892 - 7,546,104 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	7,380,922 - 7,546,091 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	10,484,372 - 10,649,772 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	19,070,601 - 19,236,001 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	17,260,424 - 17,425,831 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	1,740,026 - 1,924,959 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	1,740,024 - 1,924,827 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	1,727,915 - 1,910,475 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	2,842,948 - 3,039,747 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	2,873,390 - 3,039,747 (-)	NCBI
Celera	3	2,215,805 - 2,379,072 (-)	NCBI		Celera
Cytogenetic Map	3	p13	NCBI

CACNA1B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	137,877,782 - 138,124,619 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	137,877,782 - 138,124,624 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	140,772,234 - 141,019,071 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	139,892,062 - 140,136,449 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	138,048,077 - 138,292,468	NCBI
Cytogenetic Map	9	q34.3	NCBI
HuRef	9	110,240,583 - 110,486,666 (+)	NCBI		HuRef
CHM1_1	9	140,920,972 - 141,166,813 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	150,142,926 - 150,389,904 (+)	NCBI		T2T-CHM13v2.0

Cacna1b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	24,493,872 - 24,653,210 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	24,493,899 - 24,653,164 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	24,603,860 - 24,763,200 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	24,603,887 - 24,763,152 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	24,461,895 - 24,618,672 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	24,428,384 - 24,585,161 (-)	NCBI		MGSCv36	mm8
Celera	2	24,325,634 - 24,485,472 (-)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	16.58	NCBI

Cacna1b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	5,654,238 - 5,824,386 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	5,654,915 - 5,823,094 (+)	NCBI	ChiLan1.0	ChiLan1.0

CACNA1B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	1,216,085 - 1,470,033 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	1,218,419 - 1,472,359 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	108,989,621 - 109,256,841 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	137,935,165 - 138,147,969 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

CACNA1B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	47,813,625 - 48,009,532 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	47,816,393 - 48,009,406 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	47,000,692 - 47,196,388 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	48,674,418 - 48,870,501 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	9	47,454,379 - 47,647,489 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	47,750,936 - 47,946,938 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	47,799,821 - 47,993,105 (-)	NCBI		UU_Cfam_GSD_1.0

Cacna1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	203,066,422 - 203,243,631 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936669	133,698 - 308,488 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936669	133,488 - 308,623 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CACNA1B
(Sus scrofa - pig)

No map positions available.

CACNA1B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	75,441 - 335,980 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	78,011 - 335,820 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666058	5,057,291 - 5,305,921 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cacna1b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	81,236 - 257,787 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	78,754 - 257,901 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Cacna1b
290 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1201
Count of miRNA genes:	308
Interacting mature miRNAs:	415
Transcripts:	ENSRNOT00000006162, ENSRNOT00000048945
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631545	Bp85	Blood pressure QTL 85	3.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	1	36847613	Rat
2292615	Ept17	Estrogen-induced pituitary tumorigenesis QTL 17	6.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	6537645	10778823	Rat
631679	Cm10	Cardiac mass QTL 10	7.34	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	1	31158234	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
631568	Bp92	Blood pressure QTL 92	2.2	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	39874793	Rat
70202	Alc19	Alcohol consumption QTL 19	2.5		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	3	1	27494778	Rat
2312664	Scl62	Serum cholesterol level QTL 62		0.05	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	1	38710544	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	pulse pressure (CMO:0000292)	3	1	33278763	Rat
1358185	Ept6	Estrogen-induced pituitary tumorigenesis QTL 6	6.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	6537645	10778823	Rat
631831	Alc8	Alcohol consumption QTL 8	2.7		consumption behavior trait (VT:0002069)	calculated ethanol drink intake rate (CMO:0001615)	3	1	33230976	Rat

Markers in Region

D10Wox55

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	7,381,856 - 7,381,967 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	1,740,963 - 1,741,075	NCBI	Rnor6.0
Rnor_5.0	3	1,728,880 - 1,728,992	UniSTS	Rnor5.0
Celera	3	2,216,742 - 2,216,854	UniSTS
Cytogenetic Map	3	p13	UniSTS

AW060892

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	7,382,448 - 7,382,531 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	1,741,554 - 1,741,636	NCBI	Rnor6.0
Rnor_5.0	3	1,729,471 - 1,729,553	UniSTS	Rnor5.0
RGSC_v3.4	3	2,874,894 - 2,874,976	UniSTS	RGSC3.4
Celera	3	2,217,334 - 2,217,416	UniSTS
Cytogenetic Map	3	p13	UniSTS

AW050276

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	7,468,801 - 7,468,887 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	1,847,736 - 1,847,821	NCBI	Rnor6.0
Rnor_5.0	3	1,832,858 - 1,832,943	UniSTS	Rnor5.0
RGSC_v3.4	3	2,962,190 - 2,962,275	UniSTS	RGSC3.4
Celera	3	2,302,025 - 2,302,110	UniSTS
Cytogenetic Map	3	p13	UniSTS

RH138323

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	7,425,353 - 7,425,485 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	1,799,514 - 1,799,645	NCBI	Rnor6.0
Rnor_5.0	3	1,784,657 - 1,784,788	UniSTS	Rnor5.0
RGSC_v3.4	3	2,918,897 - 2,919,028	UniSTS	RGSC3.4
Celera	3	2,259,411 - 2,259,542	UniSTS
Cytogenetic Map	3	p13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	7	30	113	62	61	30	23	30	6	148	72	93	30	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001195199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001413253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_147141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001837030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF055477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF222337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF222338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF389419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AH007822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY211499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY211500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CS184990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FJ431206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ008360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M92905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006162 ⟹ ENSRNOP00000006162

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	7,380,922 - 7,545,957 (-)	Ensembl
Rnor_6.0 Ensembl	3	1,742,627 - 1,924,827 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000048945 ⟹ ENSRNOP00000044223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	7,380,922 - 7,545,957 (-)	Ensembl
Rnor_6.0 Ensembl	3	1,740,024 - 1,868,015 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108743 ⟹ ENSRNOP00000097135

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	7,380,922 - 7,546,091 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108914 ⟹ ENSRNOP00000083167

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	7,380,922 - 7,546,091 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117218 ⟹ ENSRNOP00000087407

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	7,380,922 - 7,546,091 (-)	Ensembl

RefSeq Acc Id:

NM_001195199 ⟹ NP_001182128

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,139 - 27,944,285 (-)	NCBI
mRatBN7.2	3	7,380,925 - 7,546,081 (-)	NCBI
Rnor_6.0	3	1,742,624 - 1,924,827 (-)	NCBI
Rnor_5.0	3	1,727,915 - 1,910,475 (-)	NCBI
Celera	3	2,218,404 - 2,378,990 (-)	NCBI

Sequence:

show sequence

ATGGTCCGCTTCGGGGACGAGCTAGGCGGCCGCTATGGGGGCACCGGCGGCGGGGAGCGGGCTC
GGGGCGGCGGGGCCGGCGGGGCCGGTGGCCCGGGCCAGGGGGGTCTGCCGCCGGGCCAGCGGGT
CCTGTACAAGCAGTCCATTGCGCAACGCGCACGGACCATGGCCCTGTACAACCCCATCCCAGTC
AAGCAGAACTGCTTCACCGTCAACCGCTCGCTCTTCGTCTTCAGCGAGGACAACGTCGTCCGCA
AATATGCTAAGCGCATCACCGAATGGCCGCCCTTCGAATATATGATCCTGGCCACCATCATCGC
CAACTGTATTGTCCTGGCCCTGGAGCAGCACCTCCCTGATGGGGACAAGACTCCCATGTCTGAA
CGACTGGATGACACGGAACCTTACTTCATCGGCATCTTTTGCTTCGAGGCGGGCATCAAGATCA
TAGCTCTGGGCTTCGTGTTCCACAAAGGCTCCTACCTCCGGAATGGCTGGAACGTCATGGACTT
CGTGGTGGTCCTCACAGGGATTCTTGCCACAGCTGGAACTGACTTTGATCTGCGCACCCTGAGG
GCTGTGCGTGTGCTTAGGCCCCTGAAGTTGGTGTCTGGAATTCCAAGCTTGCAGGTGGTGCTCA
AGTCCATCATGAAGGCCATGGTCCCGCTGCTGCAGATCGGGCTGCTGCTCTTCTTCGCCATCCT
CATGTTCGCTATCATCGGCCTCGAGTTCTATATGGGCAAATTCCATAAGGCCTGCTTCCCCAAC
AGCACAGATGCAGAGCCTGTGGGTGACTTTCCTTGTGGCAAGGAGGCCCCTGCTCGTCTGTGTG
ACAGTGACACCGAATGCCGGGAGTACTGGCCAGGACCCAACTTTGGCATCACCAATTTTGACAA
CATCCTGTTTGCCATCTTGACCGTGTTCCAGTGTATCACCATGGAGGGCTGGACTGACATCCTC
TACAATACAAATGATGCGGCCGGCAACACGTGGAACTGGTTGTACTTCATCCCCCTCATCATCA
TTGGCTCCTTCTTCATGCTCAACCTGGTGCTCGGTGTGCTTTCAGGAGAGTTTGCCAAAGAGCG
GGAGCGAGTCGAGAACCGCCGTGCCTTCCTGAAGCTCCGCAGGCAGCAGCAGATTGAGCGAGAA
CTGAATGGGTACTTGGAGTGGATCTTCAAGGCGGAGGAAGTCATGTTGGCAGAGGAGGACAAGA
ACGCAGAAGAGAAGTCCCCTTTGGATGCAGTGTTGAAGAGAGCTGCTACCAAGAAGAGCCGAAA
TGACCTCATCCATGCAGAAGAGGGGGAGGACCGGTTTGTAGACCTCTGTGCTGCTGGGTCTCCC
TTTGCTCGTGCCAGCCTCAAGAGTGGGAAGACAGAGAGCTCATCGTACTTCCGGAGGAAGGAGA
AGATGTTCCGGTTCCTTATCCGTCGTATGGTGAAAGCACAGAGCTTCTACTGGGTGGTACTGTG
CGTGGTGGCCCTGAACACGTTGTGTGTGGCCATGGTACACTATAATCAGCCTCAGCGGCTTACC
ACTGCACTGTACTTTGCAGAGTTTGTTTTCCTGGGTCTCTTCCTCACAGAGATGTCCCTGAAGA
TGTACGGTCTAGGGCCCAGAAGCTACTTCCGGTCTTCCTTCAACTGCTTTGACTTTGGGGTGAT
TGTGGGGAGTATCTTTGAAGTAGTCTGGGCTGCCATCAAGCCAGGAACCTCCTTCGGAATCAGT
GTGCTGCGGGCTCTCCGACTGCTGAGGATTTTCAAAGTCACCAAGTATTGGAACTCCCTGAGGA
ACCTGGTTGTTTCCCTCCTCAACTCCATGAAGTCCATCATCAGCCTTCTCTTCCTGCTTTTCCT
TTTCATTGTGGTCTTCGCTCTGTTGGGGATGCAGCTGTTTGGGGGACAGTTCAACTTTCAAGAT
GAGACTCCAACCACCAATTTTGATACCTTCCCAGCTGCCATCCTCACTGTGTTTCAGATTCTGA
CAGGAGAGGACTGGAATGCAGTCATGTATCATGGGATTGAGTCACAAGGAGGAGTCAGCAAAGG
CATGTTTTCATCCTTTTACTTCATCGTCCTGACACTGTTTGGAAACTACACCCTGTTGAACGTT
TTCTTGGCCATTGCTGTGGACAACCTTGCCAATGCCCAGGAGTTGACCAAGGATGAAGAGGAGA
TGGAAGAGGCAGCCAATCAGAAGCTTGCTCTTCAGAAGGCCAAAGAAGTAGCTGAAGTCAGCCC
CATGTCTGCTGCCAACATCTCCATTGCTGCTTTTGTAAAGCAAACTCGAGGTACTGTATCTCGC
AGCTCATCTGTCTCCAGCGTAAACTCACCGCAGCAGAACTCGGCCAAGGCGCGCTCAGTATGGG
AGCAGCGGGCCAGTCAGCTAAGGCTCCAGAACCTGCGTGCCAGCTGTGAGGCACTGTACAGTGA
GATGGACCCGGAGGAGCGCCTGCGTTATGCCAGCACGCGCCACGTGAGGCCAGACATGAAGACA
CACATGGACCGACCCCTAGTGGTGGAACCTGGTCGGGATGGCCTGCGGGGACCCGCCGGGAACA
AGTCAAAGCCTGAGGGCACGGAGGCCACCGAAGGTGCGGATCCACCACGCCGACACCACCGGCA
TCGTGATAGGGACAAGACCTCAGCCTCAACCCCTGCTGGAGGCGAACAGGACAGGACAGACTGC
CCAAAGGCCGAAAGCACCGAGACCGGGGCCCGGGAGGAACGTGCGCGCCCTCGTCGAAGTCACA
GCAAGGAGGCTCCAGGGGCTGACACACAAGTGCGTTGTGAGCGCAGTAGACGTCACCACCGGCG
CGGATCCCCGGAGGAGGCCACTGAACGGGAACCTCGGCGCCACCGTGCCCACCGGCACGCACAG
GACTCAAGCAAGGAAGGCAAGGAGGGCACTGCACCGGTGCTTGTACCCAAGGGCGAGCGTCGCG
CAAGACATCGAGGCCCGCGTACGGGCCCCCGTGAGACAGAGAACAGTGAGGAGCCCACACGCAG
GCACCGTGCAAAGCATAAGGTGCCACCAACACTTGAGCCCCCAGAGAGGGAGGTTGCAGAGAAG
GAGAGCAACGTGGTGGAAGGGGATAAGGAAACTCGAAATCACCAGCCCAAGGAACCTCGCTGTG
ACCTGGAGGCCATTGCGGTTACAGGCGTGGGCTCTCTGCACATGCTGCCCAGCACCTGTCTCCA
GAAAGTGGACGAACAGCCAGAGGATGCAGACAACCAGCGTAATGTCACCCGGATGGGCAGTCAG
CCCTCAGACCCCAGCACCACTGTGCATGTCCCAGTGACACTGACAGGCCCTCCCGGGGAGGCCA
CTGTAGTTCCCAGTGCTAACACGGACCTGGAAGGCCAAGCGGAGGGCAAGAAGGAGGCAGAGGC
TGACGATGTGCTGAGAAGAGGCCCCAGGCCCATCGTTCCCTACAGTTCCATGTTCTGCCTCAGC
CCCACCAACCTACTCCGTCGCTTCTGCCATTACATTGTGACCATGCGGTACTTTGAGATGGTGA
TTCTTGTGGTCATCGCCTTGAGCAGCATTGCCCTGGCTGCTGAGGATCCCGTGCGGACCGACTC
ATTCCGGAACAATGCTCTGAAGTACATGGACTACATCTTTACAGGAGTCTTCACCTTTGAGATG
GTCATAAAGATGATAGACTTGGGCCTGCTGCTGCACCCTGGGGCCTACTTCCGGGACCTGTGGA
ACATTCTGGACTTCATTGTTGTCAGTGGAGCCCTGGTGGCATTTGCATTCTCAGGATCCAAAGG
GAAAGACATCAATACCATCAAGTCTCTGAGAGTCCTGCGAGTCCTGCGGCCCCTCAAGACCATC
AAGCGGCTGCCTAAACTCAAGGCTGTGTTTGACTGTGTGGTGAACTCTCTGAAGAATGTCTTGA
ACATCCTGATCGTCTACATGCTCTTCATGTTTATATTTGCCGTCATCGCCGTCCAACTCTTCAA
AGGGAAGTTCTTTTACTGCACTGATGAGTCCAAGGAGCTGGAGCGGGACTGCAGGGGTCAGTAT
TTGGATTATGAGAAGGAAGAGGTAGAAGCCCAGCCAAGGCAGTGGAAGAAATATGACTTCCACT
ATGACAATGTGCTCTGGGCCTTGCTGACTCTGTTTACGGTGTCCACAGGAGAGGGGTGGCCCAT
GGTGCTGAAACACTCTGTGGACGCCACCTATGAGGAGCAGGGGCCAAGCCCCGGGTTTCGGATG
GAGCTTTCCATCTTCTATGTGGTCTACTTTGTGGTCTTCCCTTTTTTCTTTGTCAACATCTTTG
TGGCCTTGATCATCATCACCTTCCAGGAGCAGGGGGACAAGGTGATGTCTGAGTGCAGTCTGGA
AAAGAATGAGAGGGCTTGCATTGACTTTGCCATCAGCGCCAAACCCCTGACACGGTACATGCCT
CAGAACAAGCAGTCGTTCCAGTATAAGACATGGACATTTGTGGTCTCTCCACCCTTTGAGTACT
TCATTATGGCCATGATAGCCCTCAACACAGTGGTGCTGATGATGAAGTTCTACGATGCCCCTTA
TGAGTACGAGCTGATGCTGAAGTGCTTGAACATCGTCTTCACATCCATGTTCTCTCTGGAGTGC
ATCCTGAAGATCATCGCCTTCGGGGTGTTGAACTACTTCAGAGATGCCTGGAACGTCTTTGACT
TTGTCACTGTTTTGGGAAGTATTACTGATATTTTAGTAACGGAGATTGCGGAAACGAACAACTT
CATCAACTTGAGCTTCCTTCGCCTCTTCCGGGCAGCACGGCTGATCAAGCTGCTTCGCCAGGGC
TACACCATCCGCATCTTGTTATGGACCTTTGTCCAGTCCTTTAAGGCGCTGCCCTACGTGTGCC
TCCTCATTGCCATGCTGTTCTTCATCTACGCCATCATCGGCATGCAGGTTTTTGGAAACATTGC
CCTTGATGATGGCACCAGCATCAACCGACACAACAACTTCCGGACATTTCTGCAAGCCTTAATG
CTGTTGTTCAGGAGTGCCACTGGGGAGGCCTGGCACGAAATCATGCTGTCTTGCCTGGGCAACC
GGGCCTGCGACCCACATGCCAACGCCAGCGAATGCGGGAGCGACTTTGCCTATTTTTATTTTGT
CTCCTTCATCTTCCTCTGTTCCTTTCTGATGCTGAACCTCTTTGTTGCTGTGATCATGGACAAT
TTCGAATACCTCACGCGGGATTCTTCCATCCTAGGGCCGCACCACCTCGATGAATTCATTCGCG
TCTGGGCTGAATACGACCCAGCTGCGTGTGGGCGCATCAGTTACAATGACATGTTTGAGATGCT
GAAACACATGTCCCCACCTCTGGGTTTGGGGAAGAAATGCCCGGCTCGAGTTGCATACAAGCGC
CTGGTTCGAATGAACATGCCCATATCCAATGAGGACATGACGGTACACTTTACATCCACACTGA
TGGCCCTCATCCGGACGGCACTGGAGATCAAGCTTGCCCCAGCGGGGACAAAACAGCACCAATG
TGATGCTGAGCTGAGGAAGGAGATCTCTTCTGTGTGGGCTAATCTGCCCCAGAAGACTCTGGAC
TTACTGGTGCCACCCCACAAACCTGACGAGATGACAGTGGGGAAGGTCTATGCGGCTCTCATGA
TATTTGACTTCTACAAACAGAACAAAACCACCAGAGATCAGACTCACCAAGCTCCTGGAGGCCT
GTCCCAGATGGGTCCTGTTTCCCTGTTCCATCCTCTGAAGGCCACCCTGGAGCAGACACAGCCC
GCTGTGCTCCGAGGAGCTCGGGTTTTCCTTCGACAAAAGAGTGCAACTTCCCTCAGCAATGGGG
GCGCCATACAAACCCAGGAAAGTGGCATCAAGGAGTCCCTGTCCTGGGGCACGCAGAGGACCCA
GGACGTACTTTATGAGGCCAGAGCACCTCTAGAACGTGGCCATTCTGCAGAGATCCCTGTGGGG
CAGCCAGGAGCACTGGCTGTAGATGTCCAGATGCAGAACATGACATTGAGAGGACCGGATGGGG
AGCCCCAGCCTGGCCTGGAGAGCCAAGGCCGAGCGGCCTCTATGCCACGCCTGGCGGCAGAAAC
ACAGCCGGCCCCTAATGCCAGCCCCATGAAGCGCTCCATCTCCACACTGGCTCCACGCCCGCAT
GGGACTCAGCTTTGCAACACAGTCCTGGACCGGCCACCTCCTAGCCAGGTGTCCCATCACCACC
ACCACCGCTGCCACCGGCGCAGGGACAAGAAGCAGAGGTCCCTGGAAAAGGGGCCCAGCCTGTC
TGTTGACACAGAAGGTGCACCAAGTACTGCTGCAGGATCTGGCCTGCCCCATGGAGAAGGGTCC
ACAGGCTGCCGGCGGGAGCGTAAGCAAGAGCGAGGCCGGTCCCAGGAGCGGAGGCAGCCCTCCT
CCTCTTCTTCAGAGAAGCAGCGCTTCTATTCCTGTGACCGCTTTGGGAGCCGGGAGCCCCCACA
ACCTAAGCCCTCCCTCAGTAGCCACCCCATATCGCCAACAGCGGCACTAGAGCCAGGACCCCAC
CCGCAGGGCAGTGGTTCCGTTAATGGGAGCCCCTTGATGTCAACATCTGGTGCTAGCACGCCGG
GCCGAGGTGGGCGGAGGCAGCTCCCCCAGACTCCCCTGACCCCACGCCCCAGCATCACCTACAA
GACGGCCAATTCCTCGCCTGTCCACTTTGCTGAGGGTCAGAGTGGCCTTCCAGCCTTCTCCCCT
GGCCGTCTCAGCCGCGGCCTTTCTGAACACAATGCCCTGCTCCAGAAAGAGCCCCTGAGCCAGC
CTCTAGCTTCTGGCTCCCGCATTGGCTCTGACCCTTACCTAGGGCAGCGTCTGGACAGTGAGGC
CTCTGCCCACAACCTGCCTGAGGATACACTCACCTTTGAAGAGGCCGTGGCCACCAACTCTGGC
CGCTCCTCCAGGACTTCCTATGTGTCCTCCCTCACTTCCCAATCCCACCCTCTCCGCCGTGTAC
CCAATGGCTACCACTGCACTTTGGGACTCAGCACCGGCGTCCGGGCGCGGCACAGCTACCACCA
CCCAGACCAGGATCACTGGTGCTAG

hide sequence

RefSeq Acc Id:

NM_001413253 ⟹ NP_001400182

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,139 - 27,944,285 (-)	NCBI
mRatBN7.2	3	7,380,925 - 7,546,081 (-)	NCBI

RefSeq Acc Id:

NM_147141 ⟹ NP_671482

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,139 - 27,944,285 (-)	NCBI
mRatBN7.2	3	7,380,925 - 7,546,081 (-)	NCBI
Rnor_6.0	3	1,740,026 - 1,924,909 (-)	NCBI
Rnor_5.0	3	1,727,915 - 1,910,475 (-)	NCBI
RGSC_v3.4	3	2,842,948 - 3,039,747 (-)	RGD
Celera	3	2,215,805 - 2,379,072 (-)	RGD

Sequence:

show sequence

CGGCACGAGCGGCTAGGTTAGGAGCCCCTGGCGCGCCGCGCCCTCGGTGCCGGGCCGCGGAGCC
GGGGATGCGCGCGGCGCCCCGGGAGTCATGGTCCGCTTCGGGGACGAGCTAGGCGGCCGCTATG
GGGGCACCGGCGGCGGGGAGCGGGCTCGGGGCGGCGGGGCCGGCGGGGCCGGTGGCCCGGGCCA
GGGGGGTCTGCCGCCGGGCCAGCGGGTCCTGTACAAGCAGTCCATTGCGCAACGCGCACGGACC
ATGGCCCTGTACAACCCCATCCCAGTCAAGCAGAACTGCTTCACCGTCAACCGCTCGCTCTTCG
TCTTCAGCGAGGACAACGTCGTCCGCAAATATGCTAAGCGCATCACCGAATGGCCGCCCTTCGA
ATATATGATCCTGGCCACCATCATCGCCAACTGTATTGTCCTGGCCCTGGAGCAGCACCTCCCT
GATGGGGACAAGACTCCCATGTCTGAACGACTGGATGACACGGAACCTTACTTCATCGGCATCT
TTTGCTTCGAGGCGGGCATCAAGATCATAGCTCTGGGCTTCGTGTTCCACAAAGGCTCCTACCT
CCGGAATGGCTGGAACGTCATGGACTTCGTGGTGGTCCTCACAGGGATTCTTGCCACAGCTGGA
ACTGACTTTGATCTGCGCACCCTGAGGGCTGTGCGTGTGCTTAGGCCCCTGAAGTTGGTGTCTG
GAATTCCAAGCTTGCAGGTGGTGCTCAAGTCCATCATGAAGGCCATGGTCCCGCTGCTGCAGAT
CGGGCTGCTGCTCTTCTTCGCCATCCTCATGTTCGCTATCATCGGCCTCGAGTTCTATATGGGC
AAATTCCATAAGGCCTGCTTCCCCAACAGCACAGATGCAGAGCCTGTGGGTGACTTTCCTTGTG
GCAAGGAGGCCCCTGCTCGTCTGTGTGACAGTGACACCGAATGCCGGGAGTACTGGCCAGGACC
CAACTTTGGCATCACCAATTTTGACAACATCCTGTTTGCCATCTTGACCGTGTTCCAGTGTATC
ACCATGGAGGGCTGGACTGACATCCTCTACAATACAAATGATGCGGCCGGCAACACGTGGAACT
GGTTGTACTTCATCCCCCTCATCATCATTGGCTCCTTCTTCATGCTCAACCTGGTGCTCGGTGT
GCTTTCAGGAGAGTTTGCCAAAGAGCGGGAGCGAGTCGAGAACCGCCGTGCCTTCCTGAAGCTC
CGCAGGCAGCAGCAGATTGAGCGAGAACTGAATGGGTACTTGGAGTGGATCTTCAAGGCGGAGG
AAGTCATGTTGGCAGAGGAGGACAAGAACGCAGAAGAGAAGTCCCCTTTGGATGTGTTGAAGAG
AGCTGCTACCAAGAAGAGCCGAAATGACCTCATCCATGCAGAAGAGGGGGAGGACCGGTTTGTA
GACCTCTGTGCTGCTGGGTCTCCCTTTGCTCGTGCCAGCCTCAAGAGTGGGAAGACAGAGAGCT
CATCGTACTTCCGGAGGAAGGAGAAGATGTTCCGGTTCCTTATCCGTCGTATGGTGAAAGCACA
GAGCTTCTACTGGGTGGTACTGTGCGTGGTGGCCCTGAACACGTTGTGTGTGGCCATGGTACAC
TATAATCAGCCTCAGCGGCTTACCACTGCACTGTACTTTGCAGAGTTTGTTTTCCTGGGTCTCT
TCCTCACAGAGATGTCCCTGAAGATGTACGGTCTAGGGCCCAGAAGCTACTTCCGGTCTTCCTT
CAACTGCTTTGACTTTGGGGTGATTGTGGGGAGTATCTTTGAAGTAGTCTGGGCTGCCATCAAG
CCAGGAACCTCCTTCGGAATCAGTGTGCTGCGGGCTCTCCGACTGCTGAGGATTTTCAAAGTCA
CCAAGTATTGGAACTCCCTGAGGAACCTGGTTGTTTCCCTCCTCAACTCCATGAAGTCCATCAT
CAGCCTTCTCTTCCTGCTTTTCCTTTTCATTGTGGTCTTCGCTCTGTTGGGGATGCAGCTGTTT
GGGGGACAGTTCAACTTTCAAGATGAGACTCCAACCACCAATTTTGATACCTTCCCAGCTGCCA
TCCTCACTGTGTTTCAGATTCTGACAGGAGAGGACTGGAATGCAGTCATGTATCATGGGATTGA
GTCACAAGGAGGAGTCAGCAAAGGCATGTTTTCATCCTTTTACTTCATCGTCCTGACACTGTTT
GGAAACTACACCCTGTTGAACGTTTTCTTGGCCATTGCTGTGGACAACCTTGCCAATGCCCAGG
AGTTGACCAAGGATGAAGAGGAGATGGAAGAGGCAGCCAATCAGAAGCTTGCTCTTCAGAAGGC
CAAAGAAGTAGCTGAAGTCAGCCCCATGTCTGCTGCCAACATCTCCATTGCTGCCAGGCAGCAG
AACTCGGCCAAGGCGCGCTCAGTATGGGAGCAGCGGGCCAGTCAGCTAAGGCTCCAGAACCTGC
GTGCCAGCTGTGAGGCACTGTACAGTGAGATGGACCCGGAGGAGCGCCTGCGTTATGCCAGCAC
GCGCCACGTGAGGCCAGACATGAAGACACACATGGACCGACCCCTAGTGGTGGAACCTGGTCGG
GATGGCCTGCGGGGACCCGCCGGGAACAAGTCAAAGCCTGAGGGCACGGAGGCCACCGAAGGTG
CGGATCCACCACGCCGACACCACCGGCATCGTGATAGGGACAAGACCTCAGCCTCAACCCCTGC
TGGAGGCGAACAGGACAGGACAGACTGCCCAAAGGCCGAAAGCACCGAGACCGGGGCCCGGGAG
GAACGTGCGCGCCCTCGTCGAAGTCACAGCAAGGAGGCTCCAGGGGCTGACACACAAGTGCGTT
GTGAGCGCAGTAGACGTCACCACCGGCGCGGATCCCCGGAGGAGGCCACTGAACGGGAACCTCG
GCGCCACCGTGCCCACCGGCACGCACAGGACTCAAGCAAGGAAGGCAAGGAGGGCACTGCACCG
GTGCTTGTACCCAAGGGCGAGCGTCGCGCAAGACATCGAGGCCCGCGTACGGGCCCCCGTGAGA
CAGAGAACAGTGAGGAGCCCACACGCAGGCACCGTGCAAAGCATAAGGTGCCACCAACACTTGA
GCCCCCAGAGAGGGAGGTTGCAGAGAAGGAGAGCAACGTGGTGGAAGGGGATAAGGAAACTCGA
AATCACCAGCCCAAGGAACCTCGCTGTGACCTGGAGGCCATTGCGGTTACAGGCGTGGGCTCTC
TGCACATGCTGCCCAGCACCTGTCTCCAGAAAGTGGACGAACAGCCAGAGGATGCAGACAACCA
GCGTAATGTCACCCGGATGGGCAGTCAGCCCTCAGACCCCAGCACCACTGTGCATGTCCCAGTG
ACACTGACAGGCCCTCCCGGGGAGGCCACTGTAGTTCCCAGTGCTAACACGGACCTGGAAGGCC
AAGCGGAGGGCAAGAAGGAGGCAGAGGCTGACGATGTGCTGAGAAGAGGCCCCAGGCCCATCGT
TCCCTACAGTTCCATGTTCTGCCTCAGCCCCACCAACCTACTCCGTCGCTTCTGCCATTACATT
GTGACCATGCGGTACTTTGAGATGGTGATTCTTGTGGTCATCGCCTTGAGCAGCATTGCCCTGG
CTGCTGAGGATCCCGTGCGGACCGACTCATTCCGGAACAATGCTCTGAAGTACATGGACTACAT
CTTTACAGGAGTCTTCACCTTTGAGATGGTCATAAAGATGATAGACTTGGGCCTGCTGCTGCAC
CCTGGGGCCTACTTCCGGGACCTGTGGAACATTCTGGACTTCATTGTTGTCAGTGGAGCCCTGG
TGGCATTTGCATTCTCAGGATCCAAAGGGAAAGACATCAATACCATCAAGTCTCTGAGAGTCCT
GCGAGTCCTGCGGCCCCTCAAGACCATCAAGCGGCTGCCTAAACTCAAGGCTGTGTTTGACTGT
GTGGTGAACTCTCTGAAGAATGTCTTGAACATCCTGATCGTCTACATGCTCTTCATGTTTATAT
TTGCCGTCATCGCCGTCCAACTCTTCAAAGGGAAGTTCTTTTACTGCACTGATGAGTCCAAGGA
GCTGGAGCGGGACTGCAGGGGTCAGTATTTGGATTATGAGAAGGAAGAGGTAGAAGCCCAGCCA
AGGCAGTGGAAGAAATATGACTTCCACTATGACAATGTGCTCTGGGCCTTGCTGACTCTGTTTA
CGGTGTCCACAGGAGAGGGGTGGCCCATGGTGCTGAAACACTCTGTGGACGCCACCTATGAGGA
GCAGGGGCCAAGCCCCGGGTTTCGGATGGAGCTTTCCATCTTCTATGTGGTCTACTTTGTGGTC
TTCCCTTTTTTCTTTGTCAACATCTTTGTGGCCTTGATCATCATCACCTTCCAGGAGCAGGGGG
ACAAGGTGATGTCTGAGTGCAGTCTGGAAAAGAATGAGAGGGCTTGCATTGACTTTGCCATCAG
CGCCAAACCCCTGACACGGTACATGCCTCAGAACAAGCAGTCGTTCCAGTATAAGACATGGACA
TTTGTGGTCTCTCCACCCTTTGAGTACTTCATTATGGCCATGATAGCCCTCAACACAGTGGTGC
TGATGATGAAGTTCTACGATGCCCCTTATGAGTACGAGCTGATGCTGAAGTGCTTGAACATCGT
CTTCACATCCATGTTCTCTCTGGAGTGCATCCTGAAGATCATCGCCTTCGGGGTGTTGAACTAC
TTCAGAGATGCCTGGAACGTCTTTGACTTTGTCACTGTTTTGGGAAGTATTACTGATATTTTAG
TAACGGAGATTGCGGAAACGAACAACTTCATCAACTTGAGCTTCCTTCGCCTCTTCCGGGCAGC
ACGGCTGATCAAGCTGCTTCGCCAGGGCTACACCATCCGCATCTTGTTATGGACCTTTGTCCAG
TCCTTTAAGGCGCTGCCCTACGTGTGCCTCCTCATTGCCATGCTGTTCTTCATCTACGCCATCA
TCGGCATGCAGGTTTTTGGAAACATTGCCCTTGATGATGGCACCAGCATCAACCGACACAACAA
CTTCCGGACATTTCTGCAAGCCTTAATGCTGTTGTTCAGGAGTGCCACTGGGGAGGCCTGGCAC
GAAATCATGCTGTCTTGCCTGGGCAACCGGGCCTGCGACCCACATGCCAACGCCAGCGAATGCG
GGAGCGACTTTGCCTATTTTTATTTTGTCTCCTTCATCTTCCTCTGTTCCTTTCTGATGCTGAA
CCTCTTTGTTGCTGTGATCATGGACAATTTCGAATACCTCACGCGGGATTCTTCCATCCTAGGG
CCGCACCACCTCGATGAATTCATTCGCGTCTGGGCTGAATACGACCCAGCTGCGTGTGGGCGCA
TCAGTTACAATGACATGTTTGAGATGCTGAAACACATGTCCCCACCTCTGGGTTTGGGGAAGAA
ATGCCCGGCTCGAGTTGCATACAAGCGCCTGGTTCGAATGAACATGCCCATATCCAATGAGGAC
ATGACGGTACACTTTACATCCACACTGATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTTG
CCCCAGCGGGGACAAAACAGCACCAATGTGATGCTGAGCTGAGGAAGGAGATCTCTTCTGTGTG
GGCTAATCTGCCCCAGAAGACTCTGGACTTACTGGTGCCACCCCACAAACCTGACGAGATGACA
GTGGGGAAGGTCTATGCGGCTCTCATGATATTTGACTTCTACAAACAGAACAAAACCACCAGAG
ATCAGACTCACCAAGCTCCTGGAGGCCTGTCCCAGATGGGTCCTGTTTCCCTGTTCCATCCTCT
GAAGGCCACCCTGGAGCAGACACAGCCCGCTGTGCTCCGAGGAGCTCGGGTTTTCCTTCGACAA
AAGAGTGCAACTTCCCTCAGCAATGGGGGCGCCATACAAACCCAGGAAAGTGGCATCAAGGAGT
CCCTGTCCTGGGGCACGCAGAGGACCCAGGACGTACTTTATGAGGCCAGAGCACCTCTAGAACG
TGGCCATTCTGCAGAGATCCCTGTGGGGCAGCCAGGAGCACTGGCTGTAGATGTCCAGATGCAG
AACATGACATTGAGAGGACCGGATGGGGAGCCCCAGCCTGGCCTGGAGAGCCAAGGCCGAGCGG
CCTCTATGCCACGCCTGGCGGCAGAAACACAGCCGGCCCCTAATGCCAGCCCCATGAAGCGCTC
CATCTCCACACTGGCTCCACGCCCGCATGGGACTCAGCTTTGCAACACAGTCCTGGACCGGCCA
CCTCCTAGCCAGGTGTCCCATCACCACCACCACCGCTGCCACCGGCGCAGGGACAAGAAGCAGA
GGTCCCTGGAAAAGGGGCCCAGCCTGTCTGTTGACACAGAAGGTGCACCAAGTACTGCTGCAGG
ATCTGGCCTGCCCCATGGAGAAGGGTCCACAGGCTGCCGGCGGGAGCGTAAGCAAGAGCGAGGC
CGGTCCCAGGAGCGGAGGCAGCCCTCCTCCTCTTCTTCAGAGAAGCAGCGCTTCTATTCCTGTG
ACCGCTTTGGGAGCCGGGAGCCCCCACAACCTAAGCCCTCCCTCAGTAGCCACCCCATATCGCC
AACAGCGGCACTAGAGCCAGGACCCCACCCGCAGGGCAGTGGTTCCGTTAATGGGAGCCCCTTG
ATGTCAACATCTGGTGCTAGCACGCCGGGCCGAGGTGGGCGGAGGCAGCTCCCCCAGACTCCCC
TGACCCCACGCCCCAGCATCACCTACAAGACGGCCAATTCCTCGCCTGTCCACTTTGCTGAGGG
TCAGAGTGGCCTTCCAGCCTTCTCCCCTGGCCGTCTCAGCCGCGGCCTTTCTGAACACAATGCC
CTGCTCCAGAAAGAGCCCCTGAGCCAGCCTCTAGCTTCTGGCTCCCGCATTGGCTCTGACCCTT
ACCTAGGGCAGCGTCTGGACAGTGAGGCCTCTGCCCACAACCTGCCTGAGGATACACTCACCTT
TGAAGAGGCCGTGGCCACCAACTCTGGCCGCTCCTCCAGGACTTCCTATGTGTCCTCCCTCACT
TCCCAATCCCACCCTCTCCGCCGTGTACCCAATGGCTACCACTGCACTTTGGGACTCAGCACCG
GCGTCCGGGCGCGGCACAGCTACCACCACCCAGACCAGGATCACTGGTGCTAGCTGCACCACGA
CCACCCATGCACCAGCTCGTGGGTGCGGGTTCCAGTTGATGAGTTTTATCATCCGCTCTGGGTT
GTGCGGTCACAGCCCTGGGAGGAGGGTCCTCACATCGCGGCCTCTGTGGTGGAGGTTCCTGCTT
CTCTCCCTCCCTCCCTTTTACACTGGACAGACTAATAAAGCCCTTTCTTAGAGGGATATGGTCC
TCTCTATCCTCCTGTGTACTGCCTTCCTGGGTTCCATGCCAGATGTTGGATCCTAAGCAGAGGT
AGCTGAGTTGAGATAGACCCAGCAAATCCAAATCCTATGTCATGGCCTCCAGCTTCCAGGGTGG
GTACTTGGGACTTTCTTAGGAGGTCTGAGCCTCATGGAGATTGTGGTTTGTCCAAATGTGTGGC
ATGGGGGATAGGGTACCCTCAAAGGCAAGGAAAGGAGCCCAACTGTGTGGCCTGGCAGCACCTG
CCAGCATCACTACTCTCATGTCTATTGTGGTCTTGGAGTCAAACAGCACATGTATATAGAGATA
TGCTCAAGGGCCTGCCTTTCACCTACATTGTCACCATAATAGGGACCAAATCTAGAGGATGTCC
TTGCTGTTGATTCTGGTTTTCAGTCACAACACTTTCACTTTTTGTCATTTCTATATAGTTGATC
TAGAAAAACAGAAATCAAAACAGGGAAGAAAATGTTCGTGTAACTTAAAAAAGAAATCAACGTG
TAGGAAGGTCTCCATTTTGCATTGTTTCTGTGACTTGTATGCAATGTTCCTGTATGTATTCTAC
CCTTCCCGGGAAGTCCCCAATGACCCTGGTTCCTCTGCTCAACCAAGTGCCTGATCTCTGGCTC
TGAGCATCGTGGCTGAGGTGCGGCCTCAGGAAGCATCGGGGAGCTGCTCAGAGCAGCACTAGGA
CTTGTGTCTTAGGGACACTGACCGTGTCCAGCAGCATGTCAGAGAAGCAGCTGTAGTGCCCATG
TTCCTCCCTGAGTGATGGGTTCTGAAGAAGCCAGAGCAGCACAATGTGTGCTTGCGTGAGGCAC
TTTCCGCCTTTTAAAATCTGATTCTCAGGGATGGGATGCCTGCCAAGTAGGGTGTGATCTCTGT
TGTGTTTTAAAAAACAACAACAACAAACAAACAAAACCTAGTATTCACTGAATGCTGAAGAGAG
CAAAATGCAAGCAAAGAAGGGACTGGGGTTAGAGGGAGAAGCCCGCACTGGCAGCATAATAAGA
AACTGGCAGGGAGGGGATGGTCCTGGAACAGGCCAGGTGCCTAGAGCTGAGTCCAGCCCCTGGC
CCGGAACTGGGGACACAGCACTCAAATAAAACCTCATGGCTACTTGGTGAAAGGCAAACCCATG
CTCAGGAAGGTGTTCAGTGTGCAGAGATGGCTGTGAGGCCATGAGAGAAAGGTTTCACATAGGC
AGGCAGTCCTTGGTGTGTTCTCTGTGTTTTGAAACGTCTGATGACTTCTTGGTGGACTGTTGGT
TTCTACCCCATGTTTCTCACAGAAGCTGTGTATATGTGTGATTGCGCGTGTGATTGCATGTGTG
TGGTAGTGTGCGTGCGTGAGCATGCATGAGTCATAGGAAATGTGTGTGTGTGTGTGTGTGTGTG
TGTAGGTGTGTGTACGTGTGTTCAGCAAGTGGCTTTTGTCAACCATAGGGCTATGCAACAAAAG
ACACATTACTAGAAACAAAACACAAGACCACCACTCGGTCTAGGGTTTCAGCATGATTGTGACC
AAACCTTTTATAGAATTTCCTTATATGAAGGCACAATACCCTGAAACTTTAAAGATAACAGAGT
ATTTTATTCCAGTAGGGTAAGATTAAACAGGACCCTGGACTGCATGTGACTGCACTCATGTACA
ACAGAGGAGGATGTGCATTTTGATACTGTTCTGTCTCTGTCCCAGCCCCAGCCCTTTTCTCTTG
AGTGTTGAATGTATACATTCTGTGTGGAACTACAGCTGCTCCAGACAGTCCTGGGTTGGGAATC
ATCTTTATCCCACATTAACATAGCTGGCTTTTCTTCCAAGCACTGGTACACAGGAAAGGAGACA
TGATGTCTTGCTTCCTGACTTTGGGTTTGTTTCTGTACTGTCTCTTCTCAAGATGTTGTCTGTT
CCCCCTGAAATTTCATAGTGAGTTGCCAAATTTGAAATGCAACAACCAGCTGTCTGCATCTGGA
ACCTGTCAAGCAGTGCTGTAGTTTGAAAAAGTTATGTGTGCATGTAAAATATACACATATATAT
ATATACATTATACAAGTATGTGCATGAAATGTATATCTTCATACTTTTTGATACAATGTATTCA
TTTGTTAATTTTTAATTATATTTGATATAAATTGAAGGTTTGTTGCAAAAATTTATATTTAACA
GTGTTGAGAGAGAGAGAAAGAGCGAGAGAGGGAGAGAGAGAGAAAGATCCAATCATGCAACAGA
AATGGGACTACTTTAAAAATCAGTCCTTTGACTAGTTTGCTGCCCTGAATAATATTTACAAACC
AAACTTTGGATTCTGCTCTTGTTTCTACAATGACTTTTTGTATAAAGCAAAGTCCTTGGATTAA
TAAAACAACCAAAAATCAAATTAAACCATTA

hide sequence

RefSeq Acc Id:

XM_006233574 ⟹ XP_006233636

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI
mRatBN7.2	3	7,380,892 - 7,546,103 (-)	NCBI
Rnor_6.0	3	1,740,031 - 1,924,959 (-)	NCBI
Rnor_5.0	3	1,727,915 - 1,910,475 (-)	NCBI

Sequence:

show sequence

CGCGGCTCGGGTGCGGTAGCAGCTGGCGGGCGAGGTCCAGACAGCTCGCTGCGGCTAGGTTAGG
AGCCCCTGGCGCGCCGCGCCCTCGGTGCCGGGCCGCGGAGCCGGGGATGCGCGCGGCGCCCGGG
AGTCATGGTCCGCTTCGGGGACGAGCTAGGCGGCCGCTATGGGGGCACCGGCGGCGGGGAGCGG
GCTCGGGGCGGCGGGGCCGGCGGGGCCGGTGGCCCGGGCCAGGGGGGTCTGCCGCCGGGCCAGC
GGGTCCTGTACAAGCAGTCCATTGCGCAACGCGCACGGACCATGGCCCTGTACAACCCCATCCC
AGTCAAGCAGAACTGCTTCACCGTCAACCGCTCGCTCTTCGTCTTCAGCGAGGACAACGTCGTC
CGCAAATATGCTAAGCGCATCACCGAATGGCCGCCCTTCGAATATATGATCCTGGCCACCATCA
TCGCCAACTGTATTGTCCTGGCCCTGGAGCAGCACCTCCCTGATGGGGACAAGACTCCCATGTC
TGAACGACTGGATGACACGGAACCTTACTTCATCGGCATCTTTTGCTTCGAGGCGGGCATCAAG
ATCATAGCTCTGGGCTTCGTGTTCCACAAAGGCTCCTACCTCCGGAATGGCTGGAACGTCATGG
ACTTCGTGGTGGTCCTCACAGGGATTCTTGCCACAGCTGGAACTGACTTTGATCTGCGCACCCT
GAGGGCTGTGCGTGTGCTTAGGCCCCTGAAGTTGGTGTCTGGAATTCCAAGCTTGCAGGTGGTG
CTCAAGTCCATCATGAAGGCCATGGTCCCGCTGCTGCAGATCGGGCTGCTGCTCTTCTTCGCCA
TCCTCATGTTCGCTATCATCGGCCTCGAGTTCTATATGGGCAAATTCCATAAGGCCTGCTTCCC
CAACAGCACAGATGCAGAGCCTGTGGGTGACTTTCCTTGTGGCAAGGAGGCCCCTGCTCGTCTG
TGTGACAGTGACACCGAATGCCGGGAGTACTGGCCAGGACCCAACTTTGGCATCACCAATTTTG
ACAACATCCTGTTTGCCATCTTGACCGTGTTCCAGTGTATCACCATGGAGGGCTGGACTGACAT
CCTCTACAATACAAATGATGCGGCCGGCAACACGTGGAACTGGTTGTACTTCATCCCCCTCATC
ATCATTGGCTCCTTCTTCATGCTCAACCTGGTGCTCGGTGTGCTTTCAGGAGAGTTTGCCAAAG
AGCGGGAGCGAGTCGAGAACCGCCGTGCCTTCCTGAAGCTCCGCAGGCAGCAGCAGATTGAGCG
AGAACTGAATGGGTACTTGGAGTGGATCTTCAAGGCGGAGGAAGTCATGTTGGCAGAGGAGGAC
AAGAACGCAGAAGAGAAGTCCCCTTTGGATGCAGTGTTGAAGAGAGCTGCTACCAAGAAGAGCC
GAAATGACCTCATCCATGCAGAAGAGGGGGAGGACCGGTTTGTAGACCTCTGTGCTGCTGGGTC
TCCCTTTGCTCGTGCCAGCCTCAAGAGTGGGAAGACAGAGAGCTCATCGTACTTCCGGAGGAAG
GAGAAGATGTTCCGGTTCCTTATCCGTCGTATGGTGAAAGCACAGAGCTTCTACTGGGTGGTAC
TGTGCGTGGTGGCCCTGAACACGTTGTGTGTGGCCATGGTACACTATAATCAGCCTCAGCGGCT
TACCACTGCACTGTACTTTGCAGAGTTTGTTTTCCTGGGTCTCTTCCTCACAGAGATGTCCCTG
AAGATGTACGGTCTAGGGCCCAGAAGCTACTTCCGGTCTTCCTTCAACTGCTTTGACTTTGGGG
TGATTGTGGGGAGTATCTTTGAAGTAGTCTGGGCTGCCATCAAGCCAGGAACCTCCTTCGGAAT
CAGTGTGCTGCGGGCTCTCCGACTGCTGAGGATTTTCAAAGTCACCAAGTATTGGAACTCCCTG
AGGAACCTGGTTGTTTCCCTCCTCAACTCCATGAAGTCCATCATCAGCCTTCTCTTCCTGCTTT
TCCTTTTCATTGTGGTCTTCGCTCTGTTGGGGATGCAGCTGTTTGGGGGACAGTTCAACTTTCA
AGATGAGACTCCAACCACCAATTTTGATACCTTCCCAGCTGCCATCCTCACTGTGTTTCAGATT
CTGACAGGAGAGGACTGGAATGCAGTCATGTATCATGGGATTGAGTCACAAGGAGGAGTCAGCA
AAGGCATGTTTTCATCCTTTTACTTCATCGTCCTGACACTGTTTGGAAACTACACCCTGTTGAA
CGTTTTCTTGGCCATTGCTGTGGACAACCTTGCCAATGCCCAGGAGTTGACCAAGGATGAAGAG
GAGATGGAAGAGGCAGCCAATCAGAAGCTTGCTCTTCAGAAGGCCAAAGAAGTAGCTGAAGTCA
GCCCCATGTCTGCTGCCAACATCTCCATTGCTGCTTTTGTAAAGCAAACTCGAGGTACTGTATC
TCGCAGCTCATCTGTCTCCAGCGTAAACTCACCCAGGCAGCAGAACTCGGCCAAGGCGCGCTCA
GTATGGGAGCAGCGGGCCAGTCAGCTAAGGCTCCAGAACCTGCGTGCCAGCTGTGAGGCACTGT
ACAGTGAGATGGACCCGGAGGAGCGCCTGCGTTATGCCAGCACGCGCCACGTGAGGCCAGACAT
GAAGACACACATGGACCGACCCCTAGTGGTGGAACCTGGTCGGGATGGCCTGCGGGGACCCGCC
GGGAACAAGTCAAAGCCTGAGGGCACGGAGGCCACCGAAGGTGCGGATCCACCACGCCGACACC
ACCGGCATCGTGATAGGGACAAGACCTCAGCCTCAACCCCTGCTGGAGGCGAACAGGACAGGAC
AGACTGCCCAAAGGCCGAAAGCACCGAGACCGGGGCCCGGGAGGAACGTGCGCGCCCTCGTCGA
AGTCACAGCAAGGAGGCTCCAGGGGCTGACACACAAGTGCGTTGTGAGCGCAGTAGACGTCACC
ACCGGCGCGGATCCCCGGAGGAGGCCACTGAACGGGAACCTCGGCGCCACCGTGCCCACCGGCA
CGCACAGGACTCAAGCAAGGAAGGCAAGGAGGGCACTGCACCGGTGCTTGTACCCAAGGGCGAG
CGTCGCGCAAGACATCGAGGCCCGCGTACGGGCCCCCGTGAGACAGAGAACAGTGAGGAGCCCA
CACGCAGGCACCGTGCAAAGCATAAGGTGCCACCAACACTTGAGCCCCCAGAGAGGGAGGTTGC
AGAGAAGGAGAGCAACGTGGTGGAAGGGGATAAGGAAACTCGAAATCACCAGCCCAAGGAACCT
CGCTGTGACCTGGAGGCCATTGCGGTTACAGGCGTGGGCTCTCTGCACATGCTGCCCAGCACCT
GTCTCCAGAAAGTGGACGAACAGCCAGAGGATGCAGACAACCAGCGTAATGTCACCCGGATGGG
CAGTCAGCCCTCAGACCCCAGCACCACTGTGCATGTCCCAGTGACACTGACAGGCCCTCCCGGG
GAGGCCACTGTAGTTCCCAGTGCTAACACGGACCTGGAAGGCCAAGCGGAGGGCAAGAAGGAGG
CAGAGGCTGACGATGTGCTGAGAAGAGGCCCCAGGCCCATCGTTCCCTACAGTTCCATGTTCTG
CCTCAGCCCCACCAACCTACTCCGTCGCTTCTGCCATTACATTGTGACCATGCGGTACTTTGAG
ATGGTGATTCTTGTGGTCATCGCCTTGAGCAGCATTGCCCTGGCTGCTGAGGATCCCGTGCGGA
CCGACTCATTCCGGAACAATGCTCTGAAGTACATGGACTACATCTTTACAGGAGTCTTCACCTT
TGAGATGGTCATAAAGATGATAGACTTGGGCCTGCTGCTGCACCCTGGGGCCTACTTCCGGGAC
CTGTGGAACATTCTGGACTTCATTGTTGTCAGTGGAGCCCTGGTGGCATTTGCATTCTCAGGAT
CCAAAGGGAAAGACATCAATACCATCAAGTCTCTGAGAGTCCTGCGAGTCCTGCGGCCCCTCAA
GACCATCAAGCGGCTGCCTAAACTCAAGGCTGTGTTTGACTGTGTGGTGAACTCTCTGAAGAAT
GTCTTGAACATCCTGATCGTCTACATGCTCTTCATGTTTATATTTGCCGTCATCGCCGTCCAAC
TCTTCAAAGGGAAGTTCTTTTACTGCACTGATGAGTCCAAGGAGCTGGAGCGGGACTGCAGGGG
TCAGTATTTGGATTATGAGAAGGAAGAGGTAGAAGCCCAGCCAAGGCAGTGGAAGAAATATGAC
TTCCACTATGACAATGTGCTCTGGGCCTTGCTGACTCTGTTTACGGTGTCCACAGGAGAGGGGT
GGCCCATGGTGCTGAAACACTCTGTGGACGCCACCTATGAGGAGCAGGGGCCAAGCCCCGGGTT
TCGGATGGAGCTTTCCATCTTCTATGTGGTCTACTTTGTGGTCTTCCCTTTTTTCTTTGTCAAC
ATCTTTGTGGCCTTGATCATCATCACCTTCCAGGAGCAGGGGGACAAGGTGATGTCTGAGTGCA
GTCTGGAAAAGAATGAGAGGGCTTGCATTGACTTTGCCATCAGCGCCAAACCCCTGACACGGTA
CATGCCTCAGAACAAGCAGTCGTTCCAGTATAAGACATGGACATTTGTGGTCTCTCCACCCTTT
GAGTACTTCATTATGGCCATGATAGCCCTCAACACAGTGGTGCTGATGATGAAGTTCTACGATG
CCCCTTATGAGTACGAGCTGATGCTGAAGTGCTTGAACATCGTCTTCACATCCATGTTCTCTCT
GGAGTGCATCCTGAAGATCATCGCCTTCGGGGTGTTGAACTACTTCAGAGATGCCTGGAACGTC
TTTGACTTTGTCACTGTTTTGGGAAGTATTACTGATATTTTAGTAACGGAGATTGCGAACAACT
TCATCAACTTGAGCTTCCTTCGCCTCTTCCGGGCAGCACGGCTGATCAAGCTGCTTCGCCAGGG
CTACACCATCCGCATCTTGTTATGGACCTTTGTCCAGTCCTTTAAGGCGCTGCCCTACGTGTGC
CTCCTCATTGCCATGCTGTTCTTCATCTACGCCATCATCGGCATGCAGGTTTTTGGAAACATTG
CCCTTGATGATGGCACCAGCATCAACCGACACAACAACTTCCGGACATTTCTGCAAGCCTTAAT
GCTGTTGTTCAGGAGTGCCACTGGGGAGGCCTGGCACGAAATCATGCTGTCTTGCCTGGGCAAC
CGGGCCTGCGACCCACATGCCAACGCCAGCGAATGCGGGAGCGACTTTGCCTATTTTTATTTTG
TCTCCTTCATCTTCCTCTGTTCCTTTCTGATGCTGAACCTCTTTGTTGCTGTGATCATGGACAA
TTTCGAATACCTCACGCGGGATTCTTCCATCCTAGGGCCGCACCACCTCGATGAATTCATTCGC
GTCTGGGCTGAATACGACCCAGCTGCGTGTGGGCGCATCAGTTACAATGACATGTTTGAGATGC
TGAAACACATGTCCCCACCTCTGGGTTTGGGGAAGAAATGCCCGGCTCGAGTTGCATACAAGCG
CCTGGTTCGAATGAACATGCCCATATCCAATGAGGACATGACGGTACACTTTACATCCACACTG
ATGGCCCTCATCCGGACGGCACTGGAGATCAAGCTTGCCCCAGCGGGGACAAAACAGCACCAAT
GTGATGCTGAGCTGAGGAAGGAGATCTCTTCTGTGTGGGCTAATCTGCCCCAGAAGACTCTGGA
CTTACTGGTGCCACCCCACAAACCTGACGAGATGACAGTGGGGAAGGTCTATGCGGCTCTCATG
ATATTTGACTTCTACAAACAGAACAAAACCACCAGAGATCAGACTCACCAAGCTCCTGGAGGCC
TGTCCCAGATGGGTCCTGTTTCCCTGTTCCATCCTCTGAAGGCCACCCTGGAGCAGACACAGCC
CGCTGTGCTCCGAGGAGCTCGGGTTTTCCTTCGACAAAAGAGTGCAACTTCCCTCAGCAATGGG
GGCGCCATACAAACCCAGGAAAGTGGCATCAAGGAGTCCCTGTCCTGGGGCACGCAGAGGACCC
AGGACGTACTTTATGAGGCCAGAGCACCTCTAGAACGTGGCCATTCTGCAGAGATCCCTGTGGG
GCAGCCAGGAGCACTGGCTGTAGATGTCCAGATGCAGAACATGACATTGAGAGGACCGGATGGG
GAGCCCCAGCCTGGCCTGGAGAGCCAAGGCCGAGCGGCCTCTATGCCACGCCTGGCGGCAGAAA
CACAGCCGGCCCCTAATGCCAGCCCCATGAAGCGCTCCATCTCCACACTGGCTCCACGCCCGCA
TGGGACTCAGCTTTGCAACACAGTCCTGGACCGGCCACCTCCTAGCCAGGTGTCCCATCACCAC
CACCACCGCTGCCACCGGCGCAGGGACAAGAAGCAGAGGTCCCTGGAAAAGGGGCCCAGCCTGT
CTGTTGACACAGAAGGTGCACCAAGTACTGCTGCAGGATCTGGCCTGCCCCATGGAGAAGGGTC
CACAGGCTGCCGGCGGGAGCGTAAGCAAGAGCGAGGCCGGTCCCAGGAGCGGAGGCAGCCCTCC
TCCTCTTCTTCAGAGAAGCAGCGCTTCTATTCCTGTGACCGCTTTGGGAGCCGGGAGCCCCCAC
AACCTAAGCCCTCCCTCAGTAGCCACCCCATATCGCCAACAGCGGCACTAGAGCCAGGACCCCA
CCCGCAGGGCAGTGGTTCCGTTAATGGGAGCCCCTTGATGTCAACATCTGGTGCTAGCACGCCG
GGCCGAGGTGGGCGGAGGCAGCTCCCCCAGACTCCCCTGACCCCACGCCCCAGCATCACCTACA
AGACGGCCAATTCCTCGCCTGTCCACTTTGCTGAGGGTCAGAGTGGCCTTCCAGCCTTCTCCCC
TGGCCGTCTCAGCCGCGGCCTTTCTGAACACAATGCCCTGCTCCAGAAAGAGCCCCTGAGCCAG
CCTCTAGCTTCTGGCTCCCGCATTGGCTCTGACCCTTACCTAGGGCAGCGTCTGGACAGTGAGG
CCTCTGCCCACAACCTGCCTGAGGATACACTCACCTTTGAAGAGGCCGTGGCCACCAACTCTGG
CCGCTCCTCCAGGACTTCCTATGTGTCCTCCCTCACTTCCCAATCCCACCCTCTCCGCCGTGTA
CCCAATGGCTACCACTGCACTTTGGGACTCAGCACCGGCGTCCGGGCGCGGCACAGCTACCACC
ACCCAGACCAGGATCACTGGTGCTAGCTGCACCACGACCACCCATGCACCAGCTCGTGGGTGCG
GGTTCCAGTTGATGAGTTTTATCATCCGCTCTGGGTTGTGCGGTCACAGCCCTGGGAGGAGGGT
CCTCACATCGCGGCCTCTGTGGTGGAGGTTCCTGCTTCTCTCCCTCCCTCCCTTTTACACTGGA
CAGACTAATAAAGCCCTTTCTTAGAGGGATATGGTCCTCTCTATCCTCCTGTGTACTGCCTTCC
TGGGTTCCATGCCAGATGTTGGATCCTAAGCAGAGGTAGCTGAGTTGAGATAGACCCAGCAAAT
CCAAATCCTATGTCATGGCCTCCAGCTTCCAGGGTGGGTACTTGGGACTTTCTTAGGAGGTCTG
AGCCTCATGGAGATTGTGGTTTGTCCAAATGTGTGGCATGGGGGATAGGGTACCCTCAAAGGCA
AGGAAAGGAGCCCAACTGTGTGGCCTGGCAGCACCTGCCAGCATCACTACTCTCATGTCTATTG
TGGTCTTGGAGTCAAATAGCACATGTATATAGAGATATGCTCAAGGGCCTGCCTTTCACCTACA
TTGTCACCATAATAGGGACCAAATCTAGAGGATGTCCTTGCTGTTGATTCTGGTTTTCAGTCAC
AACACTTTCACTTTTTGTCATTTCTATATAGTTGATCTAGAAAAACAGAAATCAAAACAGGGAA
GAAAATGTTCGTGTAACTTAAAAAAGAAATCAACGTGTAGGAAGGTCTCCATTTTGCATTGTTT
CTGTGACTTGTATGCAATGTTCCTGTATGTATTCTACCCTTCCCGGGAAGTCCCCAATGACCCT
GGTTCCTCTGCTCAACCAAGTGCCTGATCTCTGGCTCTGAGCATCGTGGCTGAGGTGCGGCCTC
AGGAAGCATCGGGGAGCTGCTCAGAGCAGCACTAGGACTTGTGTCTTAGGGACACTGACCGTGT
CCAGCAGCATGTCAGAGAAGCAGCTGTAGTGCCCATGTTCCTCCCTGAGTGATGGGTTCTGAAG
AAGCCAGAGCAGCACAATGTGTGCTTGCGTGAGGCACTTTCCGCCTTTTAAAATCTGATTCTCA
GGGATGGGATGCCTGCCAAGTAGGGTGTGATCTCTGTTGTGTTTTAAAAAACAACAACAACAAA
CAAACAAAACCTAGTATTCACTGAATGCTGAAGAGAGCAAAATGCAAGCAAAGAAGGGACTGGG
GTTAGAGGGAGAAGCCCGCACTGGCAGCATAATAAGAAACTGGCAGGGAGGGGATGGTCCTGGA
ACAGGCCAGGTGCCTAGAGCTGAGTCCAGCCCCTGGCCCGGAACTGGGGACACAGCACTCAAAT
AAAACCTCATGGCTACTTGGTGAAGGCAAACCCATGCTCAGGAAGGTGTTCAGTGTGCAGAGAT
GGCTGTGAGGCCATGAGAGAAAGGTTTCACATAGGCAGGCAGTCCTTGGTGTGTTCTCTGTGTT
TTGAAACGTCTGATGACTTCTTGGTGGACTGTTGGTTTCTACCCCATGTTTCTCACAGAAGCTG
TGTATATGTGTGATTGCGCGTGTGATTGCATGTGTGTGGTGTGTGCGTGCGTGAGCATGCATGA
GTCATAGGAAATGTGTGTGTGTGTGTGTNNNTGTGTGTAGGTGTGTGTACGTGTGTTCAGCAAG
TGGCTTTTGTCAACCATAGGGCTATGCAACAAAAGACACATTACTAGAAACAAAACACAAGACC
ACCACTCGGTCTAGGGTTTCAGCATGATTGTGACCAAACCTTTTATAGAATTTCCTTATATGAA
GGCACAATACCCTGAAACTTTAAAGATAACAGAGTATTTTATTCCAGTAGGGTAAGATTAAACA
GGACCCTGGACTGCATGTGACTGCACTCATGTACAACAGAGGAGGATGTGCATTTTGATACTGT
TCTGTCTCTGTCCCAGCCCCAGCCCTTTTCTCTTGAGTGTTGAATGTATACATTCTGTGTGGAA
CTACAGCTGCTCCAGACAGTCCTGGGTTGGGAATCATCTTTATCCCACATTAACATAGCTGGCT
TTTCTTCCAAGCACTGGTACACAGGAAAGGAGACATGATGTCTTGCTTCCTGACTTTGGGTTTG
TTTCTGTACTGTCTCTTCTCAAGATGTTGTCTGTTCCCCCTGAAATTTCATAGTGAGTTGCCAA
ATTTGAAATGCAACAACCAGCTGTCTGCATCTGGAACCTGTCAAGCAGTGCTGTAGTTTGAAAA
AGTTATGTGTGCATGTAAAATATACACATATATATATATACATTATACAAGTATGTGCATGAAA
TGTATATCTTCATACTTTTTGATACAATGTATTCATTTGTTAATTTTTAATTATATTTGATATA
AATTGAAGGTTTGTTGCAAAAATTTATATTTAACAGTGTTGAGAGAGAGAGAAAGAGCGAGAGA
GGGAGAGAGAGAGAAAGATCCAATCATGCAACAGAAATGGGACTACTTTAAAAATCAGTCCTTT
GACTAGTTTGCTGCCTGAATAATATTTACAAACCAAACTTTGGATTCTGCTCTTGTTTCTACAA
TGACTTTTTGTATAAAGCAAAGTCCTTGGATTAAATAAAAACAACCAAAAAAATCAAAA

hide sequence

RefSeq Acc Id:

XM_017591505 ⟹ XP_017446994

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI
mRatBN7.2	3	7,380,892 - 7,546,103 (-)	NCBI
Rnor_6.0	3	1,740,031 - 1,924,959 (-)	NCBI

Sequence:

show sequence

CGCGGCTCGGGTGCGGTAGCAGCTGGCGGGCGAGGTCCAGACAGCTCGCTGCGGCTAGGTTAGG
AGCCCCTGGCGCGCCGCGCCCTCGGTGCCGGGCCGCGGAGCCGGGGATGCGCGCGGCGCCCGGG
AGTCATGGTCCGCTTCGGGGACGAGCTAGGCGGCCGCTATGGGGGCACCGGCGGCGGGGAGCGG
GCTCGGGGCGGCGGGGCCGGCGGGGCCGGTGGCCCGGGCCAGGGGGGTCTGCCGCCGGGCCAGC
GGGTCCTGTACAAGCAGTCCATTGCGCAACGCGCACGGACCATGGCCCTGTACAACCCCATCCC
AGTCAAGCAGAACTGCTTCACCGTCAACCGCTCGCTCTTCGTCTTCAGCGAGGACAACGTCGTC
CGCAAATATGCTAAGCGCATCACCGAATGGCCGCCCTTCGAATATATGATCCTGGCCACCATCA
TCGCCAACTGTATTGTCCTGGCCCTGGAGCAGCACCTCCCTGATGGGGACAAGACTCCCATGTC
TGAACGACTGGATGACACGGAACCTTACTTCATCGGCATCTTTTGCTTCGAGGCGGGCATCAAG
ATCATAGCTCTGGGCTTCGTGTTCCACAAAGGCTCCTACCTCCGGAATGGCTGGAACGTCATGG
ACTTCGTGGTGGTCCTCACAGGGATTCTTGCCACAGCTGGAACTGACTTTGATCTGCGCACCCT
GAGGGCTGTGCGTGTGCTTAGGCCCCTGAAGTTGGTGTCTGGAATTCCAAGCTTGCAGGTGGTG
CTCAAGTCCATCATGAAGGCCATGGTCCCGCTGCTGCAGATCGGGCTGCTGCTCTTCTTCGCCA
TCCTCATGTTCGCTATCATCGGCCTCGAGTTCTATATGGGCAAATTCCATAAGGCCTGCTTCCC
CAACAGCACAGATGCAGAGCCTGTGGGTGACTTTCCTTGTGGCAAGGAGGCCCCTGCTCGTCTG
TGTGACAGTGACACCGAATGCCGGGAGTACTGGCCAGGACCCAACTTTGGCATCACCAATTTTG
ACAACATCCTGTTTGCCATCTTGACCGTGTTCCAGTGTATCACCATGGAGGGCTGGACTGACAT
CCTCTACAATACAAATGATGCGGCCGGCAACACGTGGAACTGGTTGTACTTCATCCCCCTCATC
ATCATTGGCTCCTTCTTCATGCTCAACCTGGTGCTCGGTGTGCTTTCAGGAGAGTTTGCCAAAG
AGCGGGAGCGAGTCGAGAACCGCCGTGCCTTCCTGAAGCTCCGCAGGCAGCAGCAGATTGAGCG
AGAACTGAATGGGTACTTGGAGTGGATCTTCAAGGCGGAGGAAGTCATGTTGGCAGAGGAGGAC
AAGAACGCAGAAGAGAAGTCCCCTTTGGATGTGTTGAAGAGAGCTGCTACCAAGAAGAGCCGAA
ATGACCTCATCCATGCAGAAGAGGGGGAGGACCGGTTTGTAGACCTCTGTGCTGCTGGGTCTCC
CTTTGCTCGTGCCAGCCTCAAGAGTGGGAAGACAGAGAGCTCATCGTACTTCCGGAGGAAGGAG
AAGATGTTCCGGTTCCTTATCCGTCGTATGGTGAAAGCACAGAGCTTCTACTGGGTGGTACTGT
GCGTGGTGGCCCTGAACACGTTGTGTGTGGCCATGGTACACTATAATCAGCCTCAGCGGCTTAC
CACTGCACTGTACTTTGCAGAGTTTGTTTTCCTGGGTCTCTTCCTCACAGAGATGTCCCTGAAG
ATGTACGGTCTAGGGCCCAGAAGCTACTTCCGGTCTTCCTTCAACTGCTTTGACTTTGGGGTGA
TTGTGGGGAGTATCTTTGAAGTAGTCTGGGCTGCCATCAAGCCAGGAACCTCCTTCGGAATCAG
TGTGCTGCGGGCTCTCCGACTGCTGAGGATTTTCAAAGTCACCAAGTATTGGAACTCCCTGAGG
AACCTGGTTGTTTCCCTCCTCAACTCCATGAAGTCCATCATCAGCCTTCTCTTCCTGCTTTTCC
TTTTCATTGTGGTCTTCGCTCTGTTGGGGATGCAGCTGTTTGGGGGACAGTTCAACTTTCAAGA
TGAGACTCCAACCACCAATTTTGATACCTTCCCAGCTGCCATCCTCACTGTGTTTCAGATTCTG
ACAGGAGAGGACTGGAATGCAGTCATGTATCATGGGATTGAGTCACAAGGAGGAGTCAGCAAAG
GCATGTTTTCATCCTTTTACTTCATCGTCCTGACACTGTTTGGAAACTACACCCTGTTGAACGT
TTTCTTGGCCATTGCTGTGGACAACCTTGCCAATGCCCAGGAGTTGACCAAGGATGAAGAGGAG
ATGGAAGAGGCAGCCAATCAGAAGCTTGCTCTTCAGAAGGCCAAAGAAGTAGCTGAAGTCAGCC
CCATGTCTGCTGCCAACATCTCCATTGCTGCTTTTGTAAAGCAAACTCGAGGTACTGTATCTCG
CAGCTCATCTGTCTCCAGCGTAAACTCACCCAGGCAGCAGAACTCGGCCAAGGCGCGCTCAGTA
TGGGAGCAGCGGGCCAGTCAGCTAAGGCTCCAGAACCTGCGTGCCAGCTGTGAGGCACTGTACA
GTGAGATGGACCCGGAGGAGCGCCTGCGTTATGCCAGCACGCGCCACGTGAGGCCAGACATGAA
GACACACATGGACCGACCCCTAGTGGTGGAACCTGGTCGGGATGGCCTGCGGGGACCCGCCGGG
AACAAGTCAAAGCCTGAGGGCACGGAGGCCACCGAAGGTGCGGATCCACCACGCCGACACCACC
GGCATCGTGATAGGGACAAGACCTCAGCCTCAACCCCTGCTGGAGGCGAACAGGACAGGACAGA
CTGCCCAAAGGCCGAAAGCACCGAGACCGGGGCCCGGGAGGAACGTGCGCGCCCTCGTCGAAGT
CACAGCAAGGAGGCTCCAGGGGCTGACACACAAGTGCGTTGTGAGCGCAGTAGACGTCACCACC
GGCGCGGATCCCCGGAGGAGGCCACTGAACGGGAACCTCGGCGCCACCGTGCCCACCGGCACGC
ACAGGACTCAAGCAAGGAAGGCAAGGAGGGCACTGCACCGGTGCTTGTACCCAAGGGCGAGCGT
CGCGCAAGACATCGAGGCCCGCGTACGGGCCCCCGTGAGACAGAGAACAGTGAGGAGCCCACAC
GCAGGCACCGTGCAAAGCATAAGGTGCCACCAACACTTGAGCCCCCAGAGAGGGAGGTTGCAGA
GAAGGAGAGCAACGTGGTGGAAGGGGATAAGGAAACTCGAAATCACCAGCCCAAGGAACCTCGC
TGTGACCTGGAGGCCATTGCGGTTACAGGCGTGGGCTCTCTGCACATGCTGCCCAGCACCTGTC
TCCAGAAAGTGGACGAACAGCCAGAGGATGCAGACAACCAGCGTAATGTCACCCGGATGGGCAG
TCAGCCCTCAGACCCCAGCACCACTGTGCATGTCCCAGTGACACTGACAGGCCCTCCCGGGGAG
GCCACTGTAGTTCCCAGTGCTAACACGGACCTGGAAGGCCAAGCGGAGGGCAAGAAGGAGGCAG
AGGCTGACGATGTGCTGAGAAGAGGCCCCAGGCCCATCGTTCCCTACAGTTCCATGTTCTGCCT
CAGCCCCACCAACCTACTCCGTCGCTTCTGCCATTACATTGTGACCATGCGGTACTTTGAGATG
GTGATTCTTGTGGTCATCGCCTTGAGCAGCATTGCCCTGGCTGCTGAGGATCCCGTGCGGACCG
ACTCATTCCGGAACAATGCTCTGAAGTACATGGACTACATCTTTACAGGAGTCTTCACCTTTGA
GATGGTCATAAAGATGATAGACTTGGGCCTGCTGCTGCACCCTGGGGCCTACTTCCGGGACCTG
TGGAACATTCTGGACTTCATTGTTGTCAGTGGAGCCCTGGTGGCATTTGCATTCTCAGGATCCA
AAGGGAAAGACATCAATACCATCAAGTCTCTGAGAGTCCTGCGAGTCCTGCGGCCCCTCAAGAC
CATCAAGCGGCTGCCTAAACTCAAGGCTGTGTTTGACTGTGTGGTGAACTCTCTGAAGAATGTC
TTGAACATCCTGATCGTCTACATGCTCTTCATGTTTATATTTGCCGTCATCGCCGTCCAACTCT
TCAAAGGGAAGTTCTTTTACTGCACTGATGAGTCCAAGGAGCTGGAGCGGGACTGCAGGGGTCA
GTATTTGGATTATGAGAAGGAAGAGGTAGAAGCCCAGCCAAGGCAGTGGAAGAAATATGACTTC
CACTATGACAATGTGCTCTGGGCCTTGCTGACTCTGTTTACGGTGTCCACAGGAGAGGGGTGGC
CCATGGTGCTGAAACACTCTGTGGACGCCACCTATGAGGAGCAGGGGCCAAGCCCCGGGTTTCG
GATGGAGCTTTCCATCTTCTATGTGGTCTACTTTGTGGTCTTCCCTTTTTTCTTTGTCAACATC
TTTGTGGCCTTGATCATCATCACCTTCCAGGAGCAGGGGGACAAGGTGATGTCTGAGTGCAGTC
TGGAAAAGAATGAGAGGGCTTGCATTGACTTTGCCATCAGCGCCAAACCCCTGACACGGTACAT
GCCTCAGAACAAGCAGTCGTTCCAGTATAAGACATGGACATTTGTGGTCTCTCCACCCTTTGAG
TACTTCATTATGGCCATGATAGCCCTCAACACAGTGGTGCTGATGATGAAGTTCTACGATGCCC
CTTATGAGTACGAGCTGATGCTGAAGTGCTTGAACATCGTCTTCACATCCATGTTCTCTCTGGA
GTGCATCCTGAAGATCATCGCCTTCGGGGTGTTGAACTACTTCAGAGATGCCTGGAACGTCTTT
GACTTTGTCACTGTTTTGGGAAGTATTACTGATATTTTAGTAACGGAGATTGCGAACAACTTCA
TCAACTTGAGCTTCCTTCGCCTCTTCCGGGCAGCACGGCTGATCAAGCTGCTTCGCCAGGGCTA
CACCATCCGCATCTTGTTATGGACCTTTGTCCAGTCCTTTAAGGCGCTGCCCTACGTGTGCCTC
CTCATTGCCATGCTGTTCTTCATCTACGCCATCATCGGCATGCAGGTTTTTGGAAACATTGCCC
TTGATGATGGCACCAGCATCAACCGACACAACAACTTCCGGACATTTCTGCAAGCCTTAATGCT
GTTGTTCAGGAGTGCCACTGGGGAGGCCTGGCACGAAATCATGCTGTCTTGCCTGGGCAACCGG
GCCTGCGACCCACATGCCAACGCCAGCGAATGCGGGAGCGACTTTGCCTATTTTTATTTTGTCT
CCTTCATCTTCCTCTGTTCCTTTCTGATGCTGAACCTCTTTGTTGCTGTGATCATGGACAATTT
CGAATACCTCACGCGGGATTCTTCCATCCTAGGGCCGCACCACCTCGATGAATTCATTCGCGTC
TGGGCTGAATACGACCCAGCTGCGTGTGGGCGCATCAGTTACAATGACATGTTTGAGATGCTGA
AACACATGTCCCCACCTCTGGGTTTGGGGAAGAAATGCCCGGCTCGAGTTGCATACAAGCGCCT
GGTTCGAATGAACATGCCCATATCCAATGAGGACATGACGGTACACTTTACATCCACACTGATG
GCCCTCATCCGGACGGCACTGGAGATCAAGCTTGCCCCAGCGGGGACAAAACAGCACCAATGTG
ATGCTGAGCTGAGGAAGGAGATCTCTTCTGTGTGGGCTAATCTGCCCCAGAAGACTCTGGACTT
ACTGGTGCCACCCCACAAACCTGACGAGATGACAGTGGGGAAGGTCTATGCGGCTCTCATGATA
TTTGACTTCTACAAACAGAACAAAACCACCAGAGATCAGACTCACCAAGCTCCTGGAGGCCTGT
CCCAGATGGGTCCTGTTTCCCTGTTCCATCCTCTGAAGGCCACCCTGGAGCAGACACAGCCCGC
TGTGCTCCGAGGAGCTCGGGTTTTCCTTCGACAAAAGAGTGCAACTTCCCTCAGCAATGGGGGC
GCCATACAAACCCAGGAAAGTGGCATCAAGGAGTCCCTGTCCTGGGGCACGCAGAGGACCCAGG
ACGTACTTTATGAGGCCAGAGCACCTCTAGAACGTGGCCATTCTGCAGAGATCCCTGTGGGGCA
GCCAGGAGCACTGGCTGTAGATGTCCAGATGCAGAACATGACATTGAGAGGACCGGATGGGGAG
CCCCAGCCTGGCCTGGAGAGCCAAGGCCGAGCGGCCTCTATGCCACGCCTGGCGGCAGAAACAC
AGCCGGCCCCTAATGCCAGCCCCATGAAGCGCTCCATCTCCACACTGGCTCCACGCCCGCATGG
GACTCAGCTTTGCAACACAGTCCTGGACCGGCCACCTCCTAGCCAGGTGTCCCATCACCACCAC
CACCGCTGCCACCGGCGCAGGGACAAGAAGCAGAGGTCCCTGGAAAAGGGGCCCAGCCTGTCTG
TTGACACAGAAGGTGCACCAAGTACTGCTGCAGGATCTGGCCTGCCCCATGGAGAAGGGTCCAC
AGGCTGCCGGCGGGAGCGTAAGCAAGAGCGAGGCCGGTCCCAGGAGCGGAGGCAGCCCTCCTCC
TCTTCTTCAGAGAAGCAGCGCTTCTATTCCTGTGACCGCTTTGGGAGCCGGGAGCCCCCACAAC
CTAAGCCCTCCCTCAGTAGCCACCCCATATCGCCAACAGCGGCACTAGAGCCAGGACCCCACCC
GCAGGGCAGTGGTTCCGTTAATGGGAGCCCCTTGATGTCAACATCTGGTGCTAGCACGCCGGGC
CGAGGTGGGCGGAGGCAGCTCCCCCAGACTCCCCTGACCCCACGCCCCAGCATCACCTACAAGA
CGGCCAATTCCTCGCCTGTCCACTTTGCTGAGGGTCAGAGTGGCCTTCCAGCCTTCTCCCCTGG
CCGTCTCAGCCGCGGCCTTTCTGAACACAATGCCCTGCTCCAGAAAGAGCCCCTGAGCCAGCCT
CTAGCTTCTGGCTCCCGCATTGGCTCTGACCCTTACCTAGGGCAGCGTCTGGACAGTGAGGCCT
CTGCCCACAACCTGCCTGAGGATACACTCACCTTTGAAGAGGCCGTGGCCACCAACTCTGGCCG
CTCCTCCAGGACTTCCTATGTGTCCTCCCTCACTTCCCAATCCCACCCTCTCCGCCGTGTACCC
AATGGCTACCACTGCACTTTGGGACTCAGCACCGGCGTCCGGGCGCGGCACAGCTACCACCACC
CAGACCAGGATCACTGGTGCTAGCTGCACCACGACCACCCATGCACCAGCTCGTGGGTGCGGGT
TCCAGTTGATGAGTTTTATCATCCGCTCTGGGTTGTGCGGTCACAGCCCTGGGAGGAGGGTCCT
CACATCGCGGCCTCTGTGGTGGAGGTTCCTGCTTCTCTCCCTCCCTCCCTTTTACACTGGACAG
ACTAATAAAGCCCTTTCTTAGAGGGATATGGTCCTCTCTATCCTCCTGTGTACTGCCTTCCTGG
GTTCCATGCCAGATGTTGGATCCTAAGCAGAGGTAGCTGAGTTGAGATAGACCCAGCAAATCCA
AATCCTATGTCATGGCCTCCAGCTTCCAGGGTGGGTACTTGGGACTTTCTTAGGAGGTCTGAGC
CTCATGGAGATTGTGGTTTGTCCAAATGTGTGGCATGGGGGATAGGGTACCCTCAAAGGCAAGG
AAAGGAGCCCAACTGTGTGGCCTGGCAGCACCTGCCAGCATCACTACTCTCATGTCTATTGTGG
TCTTGGAGTCAAATAGCACATGTATATAGAGATATGCTCAAGGGCCTGCCTTTCACCTACATTG
TCACCATAATAGGGACCAAATCTAGAGGATGTCCTTGCTGTTGATTCTGGTTTTCAGTCACAAC
ACTTTCACTTTTTGTCATTTCTATATAGTTGATCTAGAAAAACAGAAATCAAAACAGGGAAGAA
AATGTTCGTGTAACTTAAAAAAGAAATCAACGTGTAGGAAGGTCTCCATTTTGCATTGTTTCTG
TGACTTGTATGCAATGTTCCTGTATGTATTCTACCCTTCCCGGGAAGTCCCCAATGACCCTGGT
TCCTCTGCTCAACCAAGTGCCTGATCTCTGGCTCTGAGCATCGTGGCTGAGGTGCGGCCTCAGG
AAGCATCGGGGAGCTGCTCAGAGCAGCACTAGGACTTGTGTCTTAGGGACACTGACCGTGTCCA
GCAGCATGTCAGAGAAGCAGCTGTAGTGCCCATGTTCCTCCCTGAGTGATGGGTTCTGAAGAAG
CCAGAGCAGCACAATGTGTGCTTGCGTGAGGCACTTTCCGCCTTTTAAAATCTGATTCTCAGGG
ATGGGATGCCTGCCAAGTAGGGTGTGATCTCTGTTGTGTTTTAAAAAACAACAACAACAAACAA
ACAAAACCTAGTATTCACTGAATGCTGAAGAGAGCAAAATGCAAGCAAAGAAGGGACTGGGGTT
AGAGGGAGAAGCCCGCACTGGCAGCATAATAAGAAACTGGCAGGGAGGGGATGGTCCTGGAACA
GGCCAGGTGCCTAGAGCTGAGTCCAGCCCCTGGCCCGGAACTGGGGACACAGCACTCAAATAAA
ACCTCATGGCTACTTGGTGAAGGCAAACCCATGCTCAGGAAGGTGTTCAGTGTGCAGAGATGGC
TGTGAGGCCATGAGAGAAAGGTTTCACATAGGCAGGCAGTCCTTGGTGTGTTCTCTGTGTTTTG
AAACGTCTGATGACTTCTTGGTGGACTGTTGGTTTCTACCCCATGTTTCTCACAGAAGCTGTGT
ATATGTGTGATTGCGCGTGTGATTGCATGTGTGTGGTGTGTGCGTGCGTGAGCATGCATGAGTC
ATAGGAAATGTGTGTGTGTGTGTGTNNNTGTGTGTAGGTGTGTGTACGTGTGTTCAGCAAGTGG
CTTTTGTCAACCATAGGGCTATGCAACAAAAGACACATTACTAGAAACAAAACACAAGACCACC
ACTCGGTCTAGGGTTTCAGCATGATTGTGACCAAACCTTTTATAGAATTTCCTTATATGAAGGC
ACAATACCCTGAAACTTTAAAGATAACAGAGTATTTTATTCCAGTAGGGTAAGATTAAACAGGA
CCCTGGACTGCATGTGACTGCACTCATGTACAACAGAGGAGGATGTGCATTTTGATACTGTTCT
GTCTCTGTCCCAGCCCCAGCCCTTTTCTCTTGAGTGTTGAATGTATACATTCTGTGTGGAACTA
CAGCTGCTCCAGACAGTCCTGGGTTGGGAATCATCTTTATCCCACATTAACATAGCTGGCTTTT
CTTCCAAGCACTGGTACACAGGAAAGGAGACATGATGTCTTGCTTCCTGACTTTGGGTTTGTTT
CTGTACTGTCTCTTCTCAAGATGTTGTCTGTTCCCCCTGAAATTTCATAGTGAGTTGCCAAATT
TGAAATGCAACAACCAGCTGTCTGCATCTGGAACCTGTCAAGCAGTGCTGTAGTTTGAAAAAGT
TATGTGTGCATGTAAAATATACACATATATATATATACATTATACAAGTATGTGCATGAAATGT
ATATCTTCATACTTTTTGATACAATGTATTCATTTGTTAATTTTTAATTATATTTGATATAAAT
TGAAGGTTTGTTGCAAAAATTTATATTTAACAGTGTTGAGAGAGAGAGAAAGAGCGAGAGAGGG
AGAGAGAGAGAAAGATCCAATCATGCAACAGAAATGGGACTACTTTAAAAATCAGTCCTTTGAC
TAGTTTGCTGCCTGAATAATATTTACAAACCAAACTTTGGATTCTGCTCTTGTTTCTACAATGA
CTTTTTGTATAAAGCAAAGTCCTTGGATTAAATAAAAACAACCAAAAAAATCAAAA

hide sequence

RefSeq Acc Id:

XM_039104390 ⟹ XP_038960318

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,831,323 - 27,944,292 (-)	NCBI
mRatBN7.2	3	7,428,221 - 7,546,104 (-)	NCBI

RefSeq Acc Id:

XM_063283165 ⟹ XP_063139235

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI

RefSeq Acc Id:

XM_063283166 ⟹ XP_063139236

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI

RefSeq Acc Id:

XM_063283167 ⟹ XP_063139237

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI

RefSeq Acc Id:

XM_063283168 ⟹ XP_063139238

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI

RefSeq Acc Id:

XM_063283169 ⟹ XP_063139239

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,779,133 - 27,944,292 (-)	NCBI

RefSeq Acc Id:

XM_063283170 ⟹ XP_063139240

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,831,323 - 27,944,292 (-)	NCBI

RefSeq Acc Id:

XR_010064570

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	27,794,321 - 27,944,292 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001182128	(Get FASTA)	NCBI Sequence Viewer
	NP_001400182	(Get FASTA)	NCBI Sequence Viewer
	NP_671482	(Get FASTA)	NCBI Sequence Viewer
	XP_006233636	(Get FASTA)	NCBI Sequence Viewer
	XP_017446994	(Get FASTA)	NCBI Sequence Viewer
	XP_038960318	(Get FASTA)	NCBI Sequence Viewer
	XP_063139235	(Get FASTA)	NCBI Sequence Viewer
	XP_063139236	(Get FASTA)	NCBI Sequence Viewer
	XP_063139237	(Get FASTA)	NCBI Sequence Viewer
	XP_063139238	(Get FASTA)	NCBI Sequence Viewer
	XP_063139239	(Get FASTA)	NCBI Sequence Viewer
	XP_063139240	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA42014	(Get FASTA)	NCBI Sequence Viewer
	AAC29043	(Get FASTA)	NCBI Sequence Viewer
	AAD31922	(Get FASTA)	NCBI Sequence Viewer
	AAF70136	(Get FASTA)	NCBI Sequence Viewer
	AAF70137	(Get FASTA)	NCBI Sequence Viewer
	AAK71643	(Get FASTA)	NCBI Sequence Viewer
	AAO53228	(Get FASTA)	NCBI Sequence Viewer
	AAO53229	(Get FASTA)	NCBI Sequence Viewer
	AAO53230	(Get FASTA)	NCBI Sequence Viewer
	ACJ61258	(Get FASTA)	NCBI Sequence Viewer
	ADM13675	(Get FASTA)	NCBI Sequence Viewer
	CAJ41867	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006162.6
	ENSRNOP00000044223.5
	ENSRNOP00000083167
	ENSRNOP00000083167.1
	ENSRNOP00000087407.1
	ENSRNOP00000097135
	ENSRNOP00000097135.1
GenBank Protein	Q02294	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_671482 ⟸ NM_147141
- Peptide Label:	isoform 2
- UniProtKB:	O89089 (UniProtKB/TrEMBL), A0A8I6GME3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYNPIPV KQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDLRTLR AVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKACFPN STDAEPVGDFPCGKEAPARLCDSDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDIL YNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERE LNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAATKKSRNDLIHAEEGEDRFVDLCAAGSPF ARASLKSGKTESSSYFRRKEKMFRFLIRRMVKAQSFYWVVLCVVALNTLCVAMVHYNQPQRLTT ALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISV LRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDE TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVF LAIAVDNLANAQELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVW EQRASQLRLQNLRASCEALYSEMDPEERLRYASTRHVRPDMKTHMDRPLVVEPGRDGLRGPAGN KSKPEGTEATEGADPPRRHHRHRDRDKTSASTPAGGEQDRTDCPKAESTETGAREERARPRRSH SKEAPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAHRHAQDSSKEGKEGTAPVLVPKGERR ARHRGPRTGPRETENSEEPTRRHRAKHKVPPTLEPPEREVAEKESNVVEGDKETRNHQPKEPRC DLEAIAVTGVGSLHMLPSTCLQKVDEQPEDADNQRNVTRMGSQPSDPSTTVHVPVTLTGPPGEA TVVPSANTDLEGQAEGKKEAEADDVLRRGPRPIVPYSSMFCLSPTNLLRRFCHYIVTMRYFEMV ILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLW NILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVL NILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQYLDYEKEEVEAQPRQWKKYDFH YDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGFRMELSIFYVVYFVVFPFFFVNIF VALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEY FIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLECILKIIAFGVLNYFRDAWNVFD FVTVLGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVC LLIAMLFFIYAIIGMQVFGNIALDDGTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGN RACDPHANASECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIR VWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTL MALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALM IFDFYKQNKTTRDQTHQAPGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSATSLSNG GAIQTQESGIKESLSWGTQRTQDVLYEARAPLERGHSAEIPVGQPGALAVDVQMQNMTLRGPDG EPQPGLESQGRAASMPRLAAETQPAPNASPMKRSISTLAPRPHGTQLCNTVLDRPPPSQVSHHH HHRCHRRRDKKQRSLEKGPSLSVDTEGAPSTAAGSGLPHGEGSTGCRRERKQERGRSQERRQPS SSSSEKQRFYSCDRFGSREPPQPKPSLSSHPISPTAALEPGPHPQGSGSVNGSPLMSTSGASTP GRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLPAFSPGRLSRGLSEHNALLQKEPLSQ PLASGSRIGSDPYLGQRLDSEASAHNLPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHPLRRV PNGYHCTLGLSTGVRARHSYHHPDQDHWC hide sequence

RefSeq Acc Id:	NP_001182128 ⟸ NM_001195199
- Peptide Label:	isoform 1
- UniProtKB:	E1AW38 (UniProtKB/TrEMBL), A0A8I6GME3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYNPIPV KQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDLRTLR AVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKACFPN STDAEPVGDFPCGKEAPARLCDSDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDIL YNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERE LNGYLEWIFKAEEVMLAEEDKNAEEKSPLDAVLKRAATKKSRNDLIHAEEGEDRFVDLCAAGSP FARASLKSGKTESSSYFRRKEKMFRFLIRRMVKAQSFYWVVLCVVALNTLCVAMVHYNQPQRLT TALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGIS VLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQD ETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNV FLAIAVDNLANAQELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSR SSSVSSVNSPQQNSAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERLRYASTRHVRPDMKT HMDRPLVVEPGRDGLRGPAGNKSKPEGTEATEGADPPRRHHRHRDRDKTSASTPAGGEQDRTDC PKAESTETGAREERARPRRSHSKEAPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAHRHAQ DSSKEGKEGTAPVLVPKGERRARHRGPRTGPRETENSEEPTRRHRAKHKVPPTLEPPEREVAEK ESNVVEGDKETRNHQPKEPRCDLEAIAVTGVGSLHMLPSTCLQKVDEQPEDADNQRNVTRMGSQ PSDPSTTVHVPVTLTGPPGEATVVPSANTDLEGQAEGKKEAEADDVLRRGPRPIVPYSSMFCLS PTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFEM VIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKTI KRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQY LDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGFRM ELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMP QNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLEC ILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQG YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDGTSINRHNNFRTFLQALM LLFRSATGEAWHEIMLSCLGNRACDPHANASECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDN FEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKR LVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLD LLVPPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQTHQAPGGLSQMGPVSLFHPLKATLEQTQP AVLRGARVFLRQKSATSLSNGGAIQTQESGIKESLSWGTQRTQDVLYEARAPLERGHSAEIPVG QPGALAVDVQMQNMTLRGPDGEPQPGLESQGRAASMPRLAAETQPAPNASPMKRSISTLAPRPH GTQLCNTVLDRPPPSQVSHHHHHRCHRRRDKKQRSLEKGPSLSVDTEGAPSTAAGSGLPHGEGS TGCRRERKQERGRSQERRQPSSSSSEKQRFYSCDRFGSREPPQPKPSLSSHPISPTAALEPGPH PQGSGSVNGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLPAFSP GRLSRGLSEHNALLQKEPLSQPLASGSRIGSDPYLGQRLDSEASAHNLPEDTLTFEEAVATNSG RSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGVRARHSYHHPDQDHWC hide sequence

RefSeq Acc Id:	XP_006233636 ⟸ XM_006233574
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GME3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYNPIPV KQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDLRTLR AVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKACFPN STDAEPVGDFPCGKEAPARLCDSDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDIL YNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERE LNGYLEWIFKAEEVMLAEEDKNAEEKSPLDAVLKRAATKKSRNDLIHAEEGEDRFVDLCAAGSP FARASLKSGKTESSSYFRRKEKMFRFLIRRMVKAQSFYWVVLCVVALNTLCVAMVHYNQPQRLT TALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGIS VLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQD ETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNV FLAIAVDNLANAQELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSR SSSVSSVNSPRQQNSAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERLRYASTRHVRPDMK THMDRPLVVEPGRDGLRGPAGNKSKPEGTEATEGADPPRRHHRHRDRDKTSASTPAGGEQDRTD CPKAESTETGAREERARPRRSHSKEAPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAHRHA QDSSKEGKEGTAPVLVPKGERRARHRGPRTGPRETENSEEPTRRHRAKHKVPPTLEPPEREVAE KESNVVEGDKETRNHQPKEPRCDLEAIAVTGVGSLHMLPSTCLQKVDEQPEDADNQRNVTRMGS QPSDPSTTVHVPVTLTGPPGEATVVPSANTDLEGQAEGKKEAEADDVLRRGPRPIVPYSSMFCL SPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFE MVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKT IKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQ YLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGFR MELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYM PQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLE CILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGY TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDGTSINRHNNFRTFLQALML LFRSATGEAWHEIMLSCLGNRACDPHANASECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNF EYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRL VRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDL LVPPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQTHQAPGGLSQMGPVSLFHPLKATLEQTQPA VLRGARVFLRQKSATSLSNGGAIQTQESGIKESLSWGTQRTQDVLYEARAPLERGHSAEIPVGQ PGALAVDVQMQNMTLRGPDGEPQPGLESQGRAASMPRLAAETQPAPNASPMKRSISTLAPRPHG TQLCNTVLDRPPPSQVSHHHHHRCHRRRDKKQRSLEKGPSLSVDTEGAPSTAAGSGLPHGEGST GCRRERKQERGRSQERRQPSSSSSEKQRFYSCDRFGSREPPQPKPSLSSHPISPTAALEPGPHP QGSGSVNGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLPAFSPG RLSRGLSEHNALLQKEPLSQPLASGSRIGSDPYLGQRLDSEASAHNLPEDTLTFEEAVATNSGR SSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGVRARHSYHHPDQDHWC hide sequence

RefSeq Acc Id:	XP_017446994 ⟸ XM_017591505
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6GME3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYNPIPV KQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDLRTLR AVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKACFPN STDAEPVGDFPCGKEAPARLCDSDTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDIL YNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERE LNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAATKKSRNDLIHAEEGEDRFVDLCAAGSPF ARASLKSGKTESSSYFRRKEKMFRFLIRRMVKAQSFYWVVLCVVALNTLCVAMVHYNQPQRLTT ALYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISV LRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDE TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVF LAIAVDNLANAQELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRS SSVSSVNSPRQQNSAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERLRYASTRHVRPDMKT HMDRPLVVEPGRDGLRGPAGNKSKPEGTEATEGADPPRRHHRHRDRDKTSASTPAGGEQDRTDC PKAESTETGAREERARPRRSHSKEAPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAHRHAQ DSSKEGKEGTAPVLVPKGERRARHRGPRTGPRETENSEEPTRRHRAKHKVPPTLEPPEREVAEK ESNVVEGDKETRNHQPKEPRCDLEAIAVTGVGSLHMLPSTCLQKVDEQPEDADNQRNVTRMGSQ PSDPSTTVHVPVTLTGPPGEATVVPSANTDLEGQAEGKKEAEADDVLRRGPRPIVPYSSMFCLS PTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFEM VIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKTI KRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQY LDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGFRM ELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMP QNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLEC ILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDGTSINRHNNFRTFLQALMLL FRSATGEAWHEIMLSCLGNRACDPHANASECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFE YLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLV RMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLL VPPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQTHQAPGGLSQMGPVSLFHPLKATLEQTQPAV LRGARVFLRQKSATSLSNGGAIQTQESGIKESLSWGTQRTQDVLYEARAPLERGHSAEIPVGQP GALAVDVQMQNMTLRGPDGEPQPGLESQGRAASMPRLAAETQPAPNASPMKRSISTLAPRPHGT QLCNTVLDRPPPSQVSHHHHHRCHRRRDKKQRSLEKGPSLSVDTEGAPSTAAGSGLPHGEGSTG CRRERKQERGRSQERRQPSSSSSEKQRFYSCDRFGSREPPQPKPSLSSHPISPTAALEPGPHPQ GSGSVNGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLPAFSPGR LSRGLSEHNALLQKEPLSQPLASGSRIGSDPYLGQRLDSEASAHNLPEDTLTFEEAVATNSGRS SRTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGVRARHSYHHPDQDHWC hide sequence

Ensembl Acc Id:

ENSRNOP00000006162 ⟸ ENSRNOT00000006162

Ensembl Acc Id:

ENSRNOP00000044223 ⟸ ENSRNOT00000048945

RefSeq Acc Id:	XP_038960318 ⟸ XM_039104390
- Peptide Label:	isoform X8

Ensembl Acc Id:

ENSRNOP00000087407 ⟸ ENSRNOT00000117218

Ensembl Acc Id:

ENSRNOP00000083167 ⟸ ENSRNOT00000108914

Ensembl Acc Id:

ENSRNOP00000097135 ⟸ ENSRNOT00000108743

RefSeq Acc Id:	NP_001400182 ⟸ NM_001413253
- Peptide Label:	isoform 3
- UniProtKB:	Q02294 (UniProtKB/Swiss-Prot), A0A8I5ZZF2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139239 ⟸ XM_063283169
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6GME3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139237 ⟸ XM_063283167
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6GME3 (UniProtKB/TrEMBL), A6JSY9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139238 ⟸ XM_063283168
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6GME3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139236 ⟸ XM_063283166
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6GME3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139235 ⟸ XM_063283165
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GME3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139240 ⟸ XM_063283170
- Peptide Label:	isoform X9

Protein Domains

EF-hand Voltage-dependent L-type calcium channel IQ-

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q02294-F1-model_v2	AlphaFold	Q02294	1-2336	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:628852	AgrOrtholog
BIND	128230
	130592
BioCyc Gene	G2FUF-50499	BioCyc
Ensembl Genes	ENSRNOG00000004560	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006162.7	UniProtKB/TrEMBL
	ENSRNOT00000048945.5	UniProtKB/TrEMBL
	ENSRNOT00000108743	ENTREZGENE
	ENSRNOT00000108743.1	UniProtKB/TrEMBL
	ENSRNOT00000108914	ENTREZGENE
	ENSRNOT00000108914.1	UniProtKB/TrEMBL
	ENSRNOT00000117218.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.287.70	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	1.20.120.350	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	6.10.250.2180	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	6.10.250.2500	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
InterPro	EF_hand_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GPHH_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ion_trans_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	VDCC_a1su_IQ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	VDCC_alpha-1_subunit	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	VDCC_N_a1su	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	VDCCAlpha1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Volt_channel_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:257648	UniProtKB/TrEMBL
NCBI Gene	257648	ENTREZGENE
PANTHER	PTHR45628:SF6	UniProtKB/TrEMBL
	VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	VOLTAGE-DEPENDENT N-TYPE CALCIUM CHANNEL SUBUNIT ALPHA-1B	UniProtKB/Swiss-Prot
Pfam	Ca_chan_IQ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GPHH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ion_trans	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Cacna1b	PhenoGen
PRINTS	CACHANNEL	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	NVDCCALPHA1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	EF_HAND_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004560	RatGTEx
SMART	Ca_chan_IQ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	Voltage-gated potassium channels	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I5ZZF2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A8G2_RAT	UniProtKB/TrEMBL
	A0A8I6GME3	ENTREZGENE, UniProtKB/TrEMBL
	A6JSY9	ENTREZGENE, UniProtKB/TrEMBL
	B7U4V7_RAT	UniProtKB/TrEMBL
	CAC1B_RAT	UniProtKB/Swiss-Prot
	E1AW38	ENTREZGENE, UniProtKB/TrEMBL
	F1LQ87_RAT	UniProtKB/TrEMBL
	F1LRE0_RAT	UniProtKB/TrEMBL
	O89089	ENTREZGENE, UniProtKB/TrEMBL
	Q02294	ENTREZGENE
	Q6XS92_RAT	UniProtKB/TrEMBL
	Q6XS93_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Cacna1b	calcium voltage-gated channel subunit alpha1 B	LOC102553311	voltage-dependent N-type calcium channel subunit alpha-1B-like	Data merged from RGD:7586711	737654	PROVISIONAL
2016-02-11	Cacna1b	calcium voltage-gated channel subunit alpha1 B	Cacna1b	calcium channel, voltage-dependent, N type, alpha 1B subunit	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-12-18	LOC102553311	voltage-dependent N-type calcium channel subunit alpha-1B-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2004-12-14	Cacna1b	calcium channel, voltage-dependent, N type, alpha 1B subunit			Symbol and Name status set to approved	1299863	APPROVED
2003-02-27	Cacna1b	calcium channel, voltage-dependent, N type, alpha 1B subunit			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)