Trpc7 (transient receptor potential cation channel, subfamily C, member 7) - Rat Genome Database

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Gene: Trpc7 (transient receptor potential cation channel, subfamily C, member 7) Rattus norvegicus
Analyze
Symbol: Trpc7
Name: transient receptor potential cation channel, subfamily C, member 7
RGD ID: 628820
Description: Predicted to enable inositol 1,4,5 trisphosphate binding activity and store-operated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport; regulation of cytosolic calcium ion concentration; and single fertilization. Predicted to act upstream of or within calcium ion transport and manganese ion transport. Located in perinuclear region of cytoplasm. Human ortholog(s) of this gene implicated in lung cancer. Orthologous to human TRPC7 (transient receptor potential cation channel subfamily C member 7); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: capacitative calcium channel TRPC7; short transient receptor potential channel 7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8177,707,954 - 7,839,064 (+)NCBIGRCr8
mRatBN7.2177,708,911 - 7,833,435 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx177,728,782 - 7,851,532 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0179,261,227 - 9,383,024 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0177,725,168 - 7,847,919 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,134,267 - 8,280,360 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,135,251 - 8,279,515 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01710,316,554 - 10,456,609 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41713,660,133 - 13,781,358 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11713,749,821 - 13,771,093 (+)NCBI
Celera177,806,368 - 7,928,485 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Increasing the expression of calcium-permeable TRPC3 and TRPC7 channels enhances constitutive secretion. Lavender V, etal., Biochem J. 2008 Aug 1;413(3):437-46. doi: 10.1042/BJ20071488.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Co-expression of non-selective cation channels of the transient receptor potential canonical family in central aminergic neurones. Sergeeva OA, etal., J Neurochem 2003 Jun;85(6):1547-52.
7. Identification of TRPCs genetic variants that modify risk for lung cancer based on the pathway and two-stage study. Zhang Z, etal., Meta Gene. 2016 Jul 8;9:191-6. doi: 10.1016/j.mgene.2016.07.005. eCollection 2016 Sep.
Additional References at PubMed
PMID:10488066   PMID:14627551   PMID:15199065   PMID:18502908  


Genomics

Comparative Map Data
Trpc7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8177,707,954 - 7,839,064 (+)NCBIGRCr8
mRatBN7.2177,708,911 - 7,833,435 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx177,728,782 - 7,851,532 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0179,261,227 - 9,383,024 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0177,725,168 - 7,847,919 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,134,267 - 8,280,360 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,135,251 - 8,279,515 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01710,316,554 - 10,456,609 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41713,660,133 - 13,781,358 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11713,749,821 - 13,771,093 (+)NCBI
Celera177,806,368 - 7,928,485 (+)NCBICelera
Cytogenetic Map17p14NCBI
TRPC7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385136,212,745 - 136,365,545 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5136,212,745 - 136,365,545 (-)EnsemblGRCh38hg38GRCh38
GRCh375135,548,433 - 135,701,233 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365135,577,022 - 135,720,974 (-)NCBINCBI36Build 36hg18NCBI36
Build 345135,577,021 - 135,720,972NCBI
Celera5131,673,736 - 131,825,919 (-)NCBICelera
Cytogenetic Map5q31.1NCBI
HuRef5130,737,474 - 130,889,316 (-)NCBIHuRef
CHM1_15134,981,614 - 135,133,762 (-)NCBICHM1_1
T2T-CHM13v2.05136,735,275 - 136,888,049 (-)NCBIT2T-CHM13v2.0
Trpc7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391356,920,911 - 57,043,778 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1356,920,926 - 57,043,806 (-)EnsemblGRCm39 Ensembl
GRCm381356,773,098 - 56,895,968 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1356,773,113 - 56,895,993 (-)EnsemblGRCm38mm10GRCm38
MGSCv371356,874,469 - 56,996,949 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361356,782,730 - 56,905,210 (-)NCBIMGSCv36mm8
Celera1357,827,818 - 57,952,905 (-)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1330.27NCBI
Trpc7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540831,261,421 - 31,416,108 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540831,260,767 - 31,408,852 (-)NCBIChiLan1.0ChiLan1.0
TRPC7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24131,499,891 - 131,652,824 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15129,639,451 - 129,792,384 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05131,604,175 - 131,756,944 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15137,743,638 - 137,896,107 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5137,743,638 - 137,896,107 (-)Ensemblpanpan1.1panPan2
TRPC7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11124,113,128 - 24,256,998 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1124,113,932 - 24,252,989 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1122,859,569 - 23,003,547 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01124,928,881 - 25,072,881 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1124,929,609 - 25,069,230 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11123,647,009 - 23,790,666 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01123,483,142 - 23,627,149 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01124,131,869 - 24,275,920 (-)NCBIUU_Cfam_GSD_1.0
Trpc7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213124,274,159 - 124,418,976 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365973,298,984 - 3,443,796 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365973,298,968 - 3,470,863 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRPC7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2138,373,189 - 138,510,728 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12138,373,972 - 138,502,280 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22143,969,145 - 144,151,823 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TRPC7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12338,957,128 - 39,098,615 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603438,814,605 - 38,955,676 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Trpc7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473310,703,428 - 10,900,054 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473310,703,295 - 10,900,206 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Trpc7
789 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:145
Count of miRNA genes:107
Interacting mature miRNAs:118
Transcripts:ENSRNOT00000016982
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17211514921881669Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)17429913021293263Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17429913021293263Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat

Markers in Region
BB254000  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2177,833,406 - 7,833,551 (+)MAPPERmRatBN7.2
Rnor_6.0178,279,487 - 8,279,631NCBIRnor6.0
Rnor_5.01710,456,343 - 10,456,487UniSTSRnor5.0
RGSC_v3.41713,781,330 - 13,781,474UniSTSRGSC3.4
Celera177,928,457 - 7,928,601UniSTS
Cytogenetic Map17p14UniSTS
RH129314  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2177,744,962 - 7,745,121 (+)MAPPERmRatBN7.2
Rnor_6.0178,176,781 - 8,176,939NCBIRnor6.0
Rnor_5.01710,356,916 - 10,357,074UniSTSRnor5.0
RGSC_v3.41713,691,448 - 13,691,606UniSTSRGSC3.4
Celera177,839,951 - 7,840,107UniSTS
Cytogenetic Map17p14UniSTS
RH140173  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2177,809,038 - 7,809,251 (+)MAPPERmRatBN7.2
Rnor_6.0178,241,562 - 8,241,774NCBIRnor6.0
Rnor_5.01710,420,770 - 10,420,982UniSTSRnor5.0
RGSC_v3.41713,757,590 - 13,757,802UniSTSRGSC3.4
Celera177,904,306 - 7,904,518UniSTS
RH 3.4 Map1765.4UniSTS
Cytogenetic Map17p14UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 5 7 1 1 62 3 9 9 1
Below cutoff 3 11 19 9 10 9 7 8 6 10 23 2 7

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001191691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017600466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAHX01089877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AAHX01089882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY157999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY390391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000016982   ⟹   ENSRNOP00000016982
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)Ensembl
Rnor_6.0 Ensembl178,135,251 - 8,279,515 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000105978   ⟹   ENSRNOP00000095667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl177,716,507 - 7,833,435 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000106426   ⟹   ENSRNOP00000089818
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000120293   ⟹   ENSRNOP00000089856
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl177,709,583 - 7,833,435 (+)Ensembl
RefSeq Acc Id: NM_001191691   ⟹   NP_001178620
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8177,714,901 - 7,838,745 (+)NCBI
mRatBN7.2177,709,583 - 7,833,435 (+)NCBI
Rnor_6.0178,135,251 - 8,279,515 (+)NCBI
Rnor_5.01710,316,554 - 10,456,609 (+)NCBI
Celera177,806,368 - 7,928,485 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600463   ⟹   XP_017455952
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8177,707,954 - 7,839,064 (+)NCBI
mRatBN7.2177,708,911 - 7,833,435 (+)NCBI
Rnor_6.0178,134,267 - 8,279,515 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001178620   ⟸   NM_001191691
- UniProtKB: F1LQF7 (UniProtKB/TrEMBL),   A6KAM1 (UniProtKB/TrEMBL),   A0A8I6GIE6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455952   ⟸   XM_017600463
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GIE6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000016982   ⟸   ENSRNOT00000016982
RefSeq Acc Id: ENSRNOP00000095667   ⟸   ENSRNOT00000105978
RefSeq Acc Id: ENSRNOP00000089856   ⟸   ENSRNOT00000120293
RefSeq Acc Id: ENSRNOP00000089818   ⟸   ENSRNOT00000106426
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LQF7-F1-model_v2 AlphaFold F1LQF7 1-862 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700284
Promoter ID:EPDNEW_R10808
Type:single initiation site
Name:Trpc7_1
Description:transient receptor potential cation channel, subfamily C, member7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0178,135,218 - 8,135,278EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:628820 AgrOrtholog
BioCyc Gene G2FUF-10289 BioCyc
Ensembl Genes ENSRNOG00000012727 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000016982 ENTREZGENE
  ENSRNOT00000016982.5 UniProtKB/TrEMBL
  ENSRNOT00000105978.1 UniProtKB/TrEMBL
  ENSRNOT00000106426.1 UniProtKB/TrEMBL
  ENSRNOT00000120293.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  1.25.40.20 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Ion_trans_dom UniProtKB/TrEMBL
  TRP_dom UniProtKB/TrEMBL
  TRPC7_channel UniProtKB/TrEMBL
  TRPC_channel UniProtKB/TrEMBL
KEGG Report rno:282822 UniProtKB/TrEMBL
NCBI Gene 282822 ENTREZGENE
PANTHER PTHR10117 UniProtKB/TrEMBL
  PTHR10117:SF9 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  Ion_trans UniProtKB/TrEMBL
  TRP_2 UniProtKB/TrEMBL
PhenoGen Trpc7 PhenoGen
PRINTS TRNSRECEPTRP UniProtKB/TrEMBL
  TRPCHANNEL7 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000012727 RatGTEx
SMART ANK UniProtKB/TrEMBL
  TRP_2 UniProtKB/TrEMBL
Superfamily-SCOP ANK UniProtKB/TrEMBL
UniProt A0A8I6ATX7_RAT UniProtKB/TrEMBL
  A0A8I6GIE6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GIF7_RAT UniProtKB/TrEMBL
  A6KAM1 ENTREZGENE, UniProtKB/TrEMBL
  A7L635_RAT UniProtKB/TrEMBL
  F1LQF7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Trpc7  transient receptor potential cation channel, subfamily C, member 7      Symbol and Name status set to approved 1299863 APPROVED
2003-02-27 Trpc7  transient receptor potential cation channel, subfamily C, member 7      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_protein homomeric in aminergic neurones 724764
gene_regulation channel activity (Ca2+ influx) induced by agonists to histamine H1 receptors, 1-adrenoreceptors, muscarinic acetylcholine receptors, and P2Y receptors 724764