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Gene: Cst6 (cystatin E/M) Rattus norvegicus
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Symbol: Cst6
Name: cystatin E/M
Description: Predicted to have cysteine-type endopeptidase inhibitor activity. Predicted to be involved in epidermis development. Predicted to localize to the cornified envelope. Human ortholog(s) of this gene implicated in ectodermal dysplasia. Orthologous to human CST6 (cystatin E/M); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cystatin M; cystatin N; cystatin-M
Orthologs:
Homo sapiens (human) : CST6 (cystatin E/M)  HGNC  Alliance
Mus musculus (house mouse) : Cst6 (cystatin E/M)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cst6 (cystatin E/M)
Pan paniscus (bonobo/pygmy chimpanzee) : CST6 (cystatin E/M)
Canis lupus familiaris (dog) : CST6 (cystatin E/M)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cst6 (cystatin E/M)
Sus scrofa (pig) : CST6 (cystatin E/M)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01220,727,292 - 220,729,000 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01227,656,559 - 227,658,267 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41207,991,313 - 207,993,021 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11208,144,765 - 208,146,474 (-)NCBI
Celera1200,190,620 - 200,192,328 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cst6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628799
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.