Gene-Chemical Interaction Annotations
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References
References - curated
Genomics
Variants
QTLs in Region (GRCr8)
RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | 2303585 | Bw86 | Body weight QTL 86 | 4 | body mass (VT:0001259) | body weight (CMO:0000012) | 4 | 15644309 | 60644309 | Rat | 5685012 | Bmd87 | Bone mineral density QTL 87 | 5.1 | tibia mineral mass (VT:1000283) | bone mineral content (CMO:0001554) | 4 | 35113290 | 80113290 | Rat | 1358352 | Srcrt3 | Stress Responsive Cort QTL 3 | 2.29 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 4 | 39431983 | 123203361 | Rat | 61445 | Strs3 | Sensitivity to stroke QTL 3 | 3 | cerebrum integrity trait (VT:0010549) | post-insult time to onset of cerebrovascular lesion (CMO:0002343) | 4 | 41400577 | 86400577 | Rat | 6893678 | Bw108 | Body weight QTL 108 | 2.6 | 0.006 | body mass (VT:0001259) | body weight (CMO:0000012) | 4 | 44425024 | 89425024 | Rat | 5685009 | Bmd86 | Bone mineral density QTL 86 | 3.7 | tibia mineral mass (VT:1000283) | bone mineral density (CMO:0001226) | 4 | 57613242 | 102613242 | Rat | 10755501 | Bp390 | Blood pressure QTL 390 | 2.5 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 4 | 27730518 | 170099664 | Rat | 1331807 | Rf31 | Renal function QTL 31 | 2.988 | urine potassium amount (VT:0010539) | urine potassium level (CMO:0000128) | 4 | 40490442 | 75726188 | Rat | 634311 | Sach7 | Saccharin preference QTL 7 | taste sensitivity trait (VT:0001986) | saccharin intake volume to total fluid intake volume ratio (CMO:0001601) | 4 | 58079875 | 82597589 | Rat | 61330 | Eau1 | Experimental allergic uveoretinitis QTL 1 | 0.0003 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 4 | 26234499 | 134199155 | Rat | 631261 | Tcas3 | Tongue tumor susceptibility QTL 3 | 6.88 | tongue integrity trait (VT:0010553) | number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) | 4 | 11706604 | 92690519 | Rat | 61336 | Bp21 | Blood pressure QTL 21 | 4.6 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 4 | 58080146 | 80212111 | Rat | 2313401 | Anxrr27 | Anxiety related response QTL 27 | aggression-related behavior trait (VT:0015014) | tameness/aggressiveness composite score (CMO:0002136) | 4 | 18900697 | 63900697 | Rat | 8655961 | Kidm43 | Kidney mass QTL 43 | 18 | kidney mass (VT:0002707) | both kidneys wet weight (CMO:0000085) | 4 | 37269577 | 82269577 | Rat | 1354612 | Foco1 | Food consumption QTL 1 | 8.87 | eating behavior trait (VT:0001431) | food intake rate (CMO:0000427) | 4 | 45429897 | 149763204 | Rat | 6909128 | Pancm4 | Pancreatic morphology QTL 4 | 11.35 | pancreas mass (VT:0010144) | pancreas wet weight (CMO:0000626) | 4 | 27862204 | 126119996 | Rat | 2303168 | Bp330 | Blood pressure QTL 330 | 4.25 | 0.017 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 4 | 5889999 | 148002343 | Rat | 61475 | Aia2 | Adjuvant induced arthritis QTL 2 | 5.8 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 4 | 40471453 | 75939996 | Rat | 8694439 | Bw168 | Body weight QTL 168 | 9.57 | 0.001 | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 4 | 41400603 | 86400603 | Rat | 61412 | Pia2 | Pristane induced arthritis QTL 2 | 3.9 | joint integrity trait (VT:0010548) | post-insult time to onset of experimental arthritis (CMO:0001450) | 4 | 22288453 | 63245191 | Rat | 8552807 | Vie4 | Viral induced encephalitis QTL 4 | 7.3 | brain integrity trait (VT:0010579) | encephalitis incidence/prevalence measurement (CMO:0002361) | 4 | 18900697 | 63900697 | Rat | 8655906 | Rf60 | Renal function QTL 60 | 3.8 | blood creatinine amount (VT:0005328) | creatinine clearance (CMO:0000765) | 4 | 30448961 | 82336920 | Rat | 1576305 | Emca6 | Estrogen-induced mammary cancer QTL 6 | 5.8 | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 4 | 45429709 | 157555683 | Rat | 7387227 | Uae40 | Urinary albumin excretion QTL 40 | 2.9 | 0.0052 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 4 | 18913151 | 63913151 | Rat | 6909122 | Insul22 | Insulin level QTL 22 | 4.63 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 4 | 27862204 | 62997402 | Rat | 1558651 | Swd3 | Spike wave discharge measurement QTL 3 | 4.62 | 0.000024 | brain electrophysiology trait (VT:0010557) | brain spike-and-wave discharge frequency (CMO:0001742) | 4 | 41400577 | 86400577 | Rat | 1358203 | Stl19 | Serum triglyceride level QTL 19 | 2.8 | 0.002 | blood triglyceride amount (VT:0002644) | serum triglyceride level (CMO:0000360) | 4 | 21925151 | 66925151 | Rat | 1354660 | Salc1 | Saline consumption QTL 1 | 11.26 | drinking behavior trait (VT:0001422) | saline drink intake rate (CMO:0001627) | 4 | 45429897 | 149763204 | Rat | 1641833 | Alc21 | Alcohol consumption QTL 21 | 8.6 | 0.0001 | drinking behavior trait (VT:0001422) | ethanol drink intake rate (CMO:0001407) | 4 | 57664252 | 127749483 | Rat | 70192 | BpQTLcluster5 | Blood pressure QTL cluster 5 | 4.183 | arterial blood pressure trait (VT:2000000) | absolute change in mean arterial blood pressure (CMO:0000533) | 4 | 1 | 63900697 | Rat | 1298082 | Stresp4 | Stress response QTL 4 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 4 | 51085655 | 113588029 | Rat | 631546 | Bp86 | Blood pressure QTL 86 | 3.2 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 4 | 58079875 | 92690793 | Rat | 1300139 | Hrtrt6 | Heart rate QTL 6 | 2.85 | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 4 | 40490442 | 117737312 | Rat | 70200 | Alc18 | Alcohol consumption QTL 18 | 9.2 | drinking behavior trait (VT:0001422) | ethanol intake volume to total fluid intake volume ratio (CMO:0001591) | 4 | 57613339 | 151163960 | Rat | 12798520 | Anxrr55 | Anxiety related response QTL 55 | 4.45 | 0.01 | locomotor behavior trait (VT:0001392) | number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715) | 4 | 33538597 | 116185060 | Rat | 4889969 | Bss96 | Bone structure and strength QTL 96 | 4.9 | tibia size trait (VT:0100001) | tibia cortical bone volume (CMO:0001725) | 4 | 57613242 | 102613242 | Rat | 2316958 | Gluco58 | Glucose level QTL 58 | 10 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 4 | 12212457 | 182430611 | Rat | 4889972 | Bss97 | Bone structure and strength QTL 97 | 5.6 | tibia size trait (VT:0100001) | tibia total bone volume (CMO:0001724) | 4 | 57613242 | 102613242 | Rat | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Watched Genes
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Watched Ontology Terms
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Expression
RNA-SEQ Expression
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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hemolymphoid system
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mesenchyme
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mesoderm
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musculoskeletal system
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nervous system
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renal system
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reproductive system
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sensory system
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visual system
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| 1 | 1 | 3 | 27 | 41 | 63 | 45 | 2 | 35 | 17 | 10 | 14 | 14 |
Sequence
Nucleotide Sequences
| RefSeq Acc Id: | NM_145790 ⟹ NP_665733 | ||||||||||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||||||||||
| Position: |
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| Sequence: |
Protein Sequences
| Protein RefSeqs | NP_665733 | (Get FASTA) | NCBI Sequence Viewer |
| GenBank Protein | AAL18254 | (Get FASTA) | NCBI Sequence Viewer |
| RefSeq Acc Id: | NP_665733 ⟸ NM_145790 |
| - UniProtKB: | A6IEB3 (UniProtKB/TrEMBL), Q91Z77 (UniProtKB/TrEMBL) |
| - Sequence: |
Additional Information
External Database Links
| Database | Acc Id | Source(s) |
| BioCyc Gene | G2FUF-45417 | BioCyc |
| KEGG Report | rno:252964 | UniProtKB/TrEMBL |
| NCBI Gene | 252964 | ENTREZGENE |
| PhenoGen | Lipogenin | PhenoGen |
| UniProt | A6IEB3 | ENTREZGENE, UniProtKB/TrEMBL |
| Q91Z77 | ENTREZGENE, UniProtKB/TrEMBL |
Nomenclature History
| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2003-02-27 | Lipogenin | Lipogenin | Symbol and Name status set to provisional | 70820 | PROVISIONAL |