Slc25a25 (solute carrier family 25 member 25)

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Gene: Slc25a25 (solute carrier family 25 member 25) Rattus norvegicus

Analyze

Symbol:

Slc25a25

Name:

solute carrier family 25 member 25

RGD ID:

628666

Description:

Predicted to enable ATP transmembrane transporter activity. Predicted to be involved in ADP transport and ATP transport. Predicted to act upstream of or within several processes, including adipose tissue development; response to activity; and response to food. Predicted to be located in mitochondrion. Orthologous to human SLC25A25 (solute carrier family 25 member 25); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,5'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

ATP-Mg/Pi carrier; calcium-binding mitochondrial carrier protein SCaMC-2; Mcsc; mitochondrial ATP-Mg/Pi carrier protein; mitochondrial Ca2+-dependent solute carrier; Pcscl; peroxisomal Ca(2+)-dependent solute carrier-like protein; peroxisomal Ca-dependent solute carrier-like protein; small calcium-binding mitochondrial carrier protein 2; solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC25A25 (solute carrier family 25 member 25)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Slc25a25 (solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc25a25 (solute carrier family 25 member 25)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC25A25 (solute carrier family 25 member 25)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC25A25 (solute carrier family 25 member 25)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc25a25 (solute carrier family 25 member 25)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC25A25 (solute carrier family 25 member 25)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC25A25 (solute carrier family 25 member 25)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc25a25 (solute carrier family 25 member 25)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SLC25A25 (solute carrier family 25 member 25)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc25a25 (solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc25a25b (solute carrier family 25 member 25b)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc25a25a (solute carrier family 25 member 25a)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	F17E5.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG32103	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SAL1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	F55A11.4	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YPR011C	Alliance	DIOPT (Ensembl Compara\|InParanoid\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	15,708,702 - 15,742,195 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	15,708,703 - 15,742,216 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	18,777,546 - 18,787,673 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	27,362,543 - 27,372,674 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	25,613,291 - 25,623,413 (-)	NCBI	Rnor_WKY
Rnor_6.0	3	11,442,396 - 11,476,186 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	11,442,397 - 11,452,529 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	16,791,266 - 16,825,049 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	11,539,415 - 11,549,538 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	11,435,787 - 11,445,910 (-)	NCBI
Celera	3	10,451,575 - 10,461,792 (-)	NCBI		Celera
Cytogenetic Map	3	p11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

congenital disorder of glycosylation Iu (ISO)

developmental and epileptic encephalopathy (ISO)

developmental and epileptic encephalopathy 31 (ISO)

early infantile epileptic encephalopathy (ISO)

High Myopia (ISO)

nephrolithiasis (ISO)

primary coenzyme Q10 deficiency 7 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17alpha-ethynylestradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,2',4,5'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

3,3',5-triiodo-L-thyronine (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (EXP,ISO)

4-hydroxyphenyl retinamide (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (EXP,ISO)

alpha-pinene (ISO)

amiodarone (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

Brodifacoum (EXP)

bromobenzene (EXP)

cadmium dichloride (EXP)

cadmium sulfate (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chloroprene (EXP)

choline (ISO)

ciguatoxin CTX1B (ISO)

cisplatin (ISO)

clofibrate (ISO)

cyclosporin A (EXP,ISO)

cylindrospermopsin (ISO)

dibutyl phthalate (EXP)

dioxygen (ISO)

epoxiconazole (ISO)

ethanol (ISO)

fluoranthene (ISO)

flutamide (EXP)

folic acid (ISO)

formaldehyde (ISO)

furan (EXP)

gentamycin (EXP)

indole-3-methanol (EXP)

L-methionine (ISO)

leflunomide (ISO)

Licochalcone B (ISO)

mercury dichloride (EXP)

methamphetamine (EXP)

methylmercury chloride (ISO)

monosodium L-glutamate (ISO)

nefazodone (EXP)

nickel atom (ISO)

nimesulide (EXP)

ozone (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

phenobarbital (ISO)

phorone (EXP)

pirinixic acid (ISO)

progesterone (EXP)

rac-lactic acid (ISO)

sevoflurane (EXP)

silicon dioxide (ISO)

Soman (EXP)

sunitinib (ISO)

tacrolimus hydrate (EXP)

tamoxifen (ISO)

teriflunomide (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichostatin A (ISO)

troglitazone (ISO)

urethane (ISO)

valdecoxib (EXP)

valproic acid (ISO)

vancomycin (ISO)

vinclozolin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adipose tissue development (ISO)

ATP metabolic process (ISO)

calcium ion transmembrane transport (ISO)

camera-type eye development (ISO)

cellular respiration (ISO)

multicellular organism growth (ISO)

response to activity (ISO)

response to dietary excess (ISO)

response to food (ISO)

transmembrane transport (IEA)

Cellular Component

mitochondrial inner membrane (IEA)

mitochondrion (ISO)

Molecular Function

calcium ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	A novel mitochondrial Ca2+-dependent solute carrier in the liver identified by mRNA differential display.	Mashima H, etal., J Biol Chem 2003 Mar 14;278(11):9520-7.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12851217	PMID:18614015	PMID:21296886	PMID:23062354	PMID:23344948	PMID:23376485	PMID:30361391

Genomics

Comparative Map Data

Slc25a25
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	15,708,702 - 15,742,195 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	15,708,703 - 15,742,216 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	18,777,546 - 18,787,673 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	27,362,543 - 27,372,674 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	25,613,291 - 25,623,413 (-)	NCBI	Rnor_WKY
Rnor_6.0	3	11,442,396 - 11,476,186 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	11,442,397 - 11,452,529 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	16,791,266 - 16,825,049 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	11,539,415 - 11,549,538 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	11,435,787 - 11,445,910 (-)	NCBI
Celera	3	10,451,575 - 10,461,792 (-)	NCBI		Celera
Cytogenetic Map	3	p11	NCBI

SLC25A25
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	128,068,232 - 128,109,245 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	9	128,068,201 - 128,109,245 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	130,830,511 - 130,871,524 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	129,870,300 - 129,911,345 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	127,940,370 - 127,951,078	NCBI
Celera	9	101,482,501 - 101,523,452 (+)	NCBI		Celera
Cytogenetic Map	9	q34.11	NCBI
HuRef	9	100,445,708 - 100,486,206 (+)	NCBI		HuRef
CHM1_1	9	130,982,710 - 131,023,583 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	140,276,208 - 140,317,210 (+)	NCBI		T2T-CHM13v2.0

Slc25a25
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	32,304,499 - 32,341,482 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	32,304,499 - 32,341,457 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	32,414,487 - 32,451,470 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	32,414,487 - 32,451,445 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	32,270,007 - 32,306,990 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	32,236,489 - 32,273,431 (-)	NCBI		MGSCv36	mm8
Celera	2	32,120,151 - 32,157,130 (-)	NCBI		Celera
Cytogenetic Map	2	B	NCBI

Slc25a25
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	618,979 - 656,189 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	621,445 - 656,172 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC25A25
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	9	127,859,948 - 127,900,922 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	127,859,948 - 127,900,922 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	9	99,188,906 - 99,229,771 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

SLC25A25
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	55,358,348 - 55,394,624 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	55,360,043 - 55,394,519 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	54,553,071 - 54,588,912 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	56,285,169 - 56,316,835 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	9	55,040,512 - 55,076,587 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	55,355,242 - 55,391,319 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	55,446,944 - 55,482,811 (-)	NCBI		UU_Cfam_GSD_1.0

Slc25a25
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	195,892,611 - 195,927,737 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	15,661,079 - 15,696,406 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936487	15,661,133 - 15,696,267 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC25A25
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	268,531,752 - 268,576,994 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	268,531,752 - 268,575,195 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	302,558,673 - 302,565,658 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	1	302,453,222 - 302,453,476 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC25A25
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	10,017,775 - 10,059,013 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	10,017,755 - 10,035,476 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666079	6,165,921 - 6,208,553 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc25a25
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	7,515,764 - 7,550,810 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	7,516,910 - 7,550,897 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc25a25
212 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	257
Count of miRNA genes:	167
Interacting mature miRNAs:	202
Transcripts:	ENSRNOT00000020206
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70202	Alc19	Alcohol consumption QTL 19	2.5		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	3	1	27494778	Rat
631679	Cm10	Cardiac mass QTL 10	7.34	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	1	31158234	Rat
631831	Alc8	Alcohol consumption QTL 8	2.7		consumption behavior trait (VT:0002069)	calculated ethanol drink intake rate (CMO:0001615)	3	1	33230976	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	diastolic blood pressure (CMO:0000005)	3	1	33278763	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	pulse pressure (CMO:0000292)	3	1	33278763	Rat
631545	Bp85	Blood pressure QTL 85	3.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	1	36847613	Rat
2312664	Scl62	Serum cholesterol level QTL 62		0.05	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	1	38710544	Rat
631568	Bp92	Blood pressure QTL 92	2.2	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	39874793	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
1298526	Arunc3	Aerobic running capacity QTL 3	2.2		exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	3	8227194	33703538	Rat
10401810	Kidm53	Kidney mass QTL 53			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	8227194	47233430	Rat
70203	Gcr2	Gastric cancer resistance QTL 2	2.6		stomach morphology trait (VT:0000470)	stomach tumor susceptibility score (CMO:0002043)	3	8658162	27494778	Rat
1358357	Srcrtb1	Stress Responsive Cort Basal QTL 1	6.36	0.002	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	8658162	27494778	Rat
6893355	Bw101	Body weight QTL 101	0.4	0.38	body mass (VT:0001259)	body weight (CMO:0000012)	3	10778704	30357018	Rat
6893363	Bw105	Body weight QTL 105	2.6	0.0036	body mass (VT:0001259)	body weight (CMO:0000012)	3	10778704	30357018	Rat
1558654	Bw56	Body weight QTL 56	4.5	0.0000171	body mass (VT:0001259)	body weight (CMO:0000012)	3	10778704	30357018	Rat
70191	BpQTLcluster4	Blood pressure QTL cluster 4	3		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	3	10778704	50302886	Rat
70191	BpQTLcluster4	Blood pressure QTL cluster 4	3		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	3	10778704	50302886	Rat
1558647	Cm46	Cardiac mass QTL 46	5.4	0.0000055	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	10778823	30356773	Rat
1558650	Cm48	Cardiac mass QTL 48	4	0.0001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	3	10778823	30356773	Rat
1558657	Cm43	Cardiac mass QTL 43	6.6	0.0000000293	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	10778823	30356773	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	10861912	89878372	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
2298542	Neuinf11	Neuroinflammation QTL 11	3.9		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	3	15005422	76927699	Rat

Markers in Region

UniSTS:547045

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	15,708,940 - 15,709,865 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	11,442,635 - 11,443,559	NCBI	Rnor6.0
Rnor_5.0	3	16,791,505 - 16,792,429	UniSTS	Rnor5.0
Celera	3	10,451,814 - 10,452,738	UniSTS
Cytogenetic Map	3	p11	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	22	51	37	17	37	7	10	74	35	41	11	7
Low		21	6	4	2	4	1	1					1
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_145677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY043169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000020206 ⟹ ENSRNOP00000020206

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	15,708,703 - 15,718,835 (-)	Ensembl
Rnor_6.0 Ensembl	3	11,442,397 - 11,452,529 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000099400 ⟹ ENSRNOP00000092861

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	15,708,703 - 15,720,289 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000102915 ⟹ ENSRNOP00000092658

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	15,708,703 - 15,720,874 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000104155 ⟹ ENSRNOP00000091438

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	15,708,703 - 15,725,977 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000107630 ⟹ ENSRNOP00000093449

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	15,708,703 - 15,742,216 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000115249 ⟹ ENSRNOP00000087701

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	15,708,703 - 15,725,977 (-)	Ensembl

RefSeq Acc Id:

NM_145677 ⟹ NP_663710

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	15,708,702 - 15,718,835 (-)	NCBI
Rnor_6.0	3	11,442,396 - 11,452,529 (-)	NCBI
Rnor_5.0	3	16,791,266 - 16,825,049 (-)	NCBI
RGSC_v3.4	3	11,539,415 - 11,549,538 (-)	RGD
Celera	3	10,451,575 - 10,461,792 (-)	RGD

Sequence:

show sequence

GGCATATCTTGTGCTAGTTTCCCAGGAACCCGGCATTCCCTACTCTTGACTTCTGCCGGCACTT
GCTCCTGGTGGTAGCTGAGCACCGGGTCTCACCAGCATGCTCTGCCTGTGCCTGTATGTGCCCA
TCGCTGGAGAGGCTCAGACTGAATTCCAATACTTTGAGTCCAAGGGGCTTCCCACCGAGCTGAA
ATCCATCTTCAAACTCAGTGTCTTTATCCCCTCTCAGGAGTTCTCCACATACCGCCAATGGAAG
CAGAAAATTGTGCAAGCAGGTGACAAGGACCTTGATGGGCAACTGGACTTCGAAGAGTTTGTAC
ATTACCTCCAAGACCATGAGAAAAAACTGAGGCTGGTGTTTAAGAGTCTGGACAAAAAGAATGA
TGGGCGAATCGATGCTCAGGAGATCATGCAGTCCCTGCGGGATCTGGGTGTCAAGATCTCTGAA
CAGCAGGCGGAGAAGATTCTTAAGAGCATGGATAAGAATGGGACAATGACCATCGACTGGAACG
AGTGGAGGGACTACCACCTCCTGCACCCTGTGGAGAACATCCCTGAGATCATCCTGTACTGGAA
GCACTCGACGATCTTCGATGTTGGTGAGAATCTGACAGTCCCAGATGAGTTCACAGTGGAGGAG
AGGCAGACAGGGATGTGGTGGAGGCACCTGGTGGCAGGAGGTGGTGCAGGGGCAGTTTCCAGAA
CCTGCACTGCCCCCCTGGACAGACTGAAGGTGCTCATGCAGGTCCATGCCTCCCGCAGCAACAA
CATGTGCATCATAGGTGGATTCACACAGATGATTCGAGAAGGGGGCGCCAAGTCCCTCTGGAGG
GGCAATGGCATCAATGTCCTCAAAATTGCCCCTGAGTCAGCCATCAAGTTCATGGCATATGAGC
AGATGAAACGCCTTGTTGGTAGTGATCAGGAGACGCTGAGGATCCACGAAAGGCTAGTGGCAGG
CTCCTTGGCTGGGGCCATTGCCCAGAGTAGCATCTACCCAATGGAGGTTCTGAAGACCCGAATG
GCCCTGCGGAAAACAGGCCAGTACTCGGGAATGCTGGACTGTGCCAAGAGGATCCTGGCTAAAG
AGGGTGTGGCTGCCTTCTATAAAGGCTACATCCCCAACATGCTGGGGATCATCCCGTATGCGGG
CATCGATCTAGCTGTCTATGAGACATTGAAAAATACCTGGCTACAGCGCTATGCTGTAAACAGT
GCAGACCCTGGCGTGTTTGTTCTCCTGGCCTGTGGCACAATCTCCAGTACCTGTGGCCAACTGG
CCAGCTACCCACTAGCCCTGGTCAGGACTCGGATGCAGGCACAAGCCTCCATTGAGGGTGCACC
TGAGGTAACCATGAGCAGCCTCTTCAAACAGATTCTGCGGACTGAGGGGGCCTTTGGGCTCTAC
CGGGGGCTGGCCCCCAACTTCATGAAGGTGATTCCAGCTGTGAGCATCAGCTACGTGGTCTACG
AGAACCTGAAGATCACCCTGGGCGTGCAGTCTCGGTGACGGGAGGGTGGCGGACTTGGTGACCC
TGGGCTGCAGCCCAGGGTGTGCAGCCGCCTCATTCTGTGAATGTGCCAACACTAAGCTGACTTA
CCCAAGCTGTGAAACCCAGGATGCTGCAGGGGACGGGCAGGGAGCTGCAAGCGCTGGGCTGGTC
CTGCTGACCTGGCAGACCTTTGTGTCTCTTCCAAGGAAGACCTGTGGACATTCCTTGGGGTCCA
GGGGTCAGTAAGATGTGGGCTCCTGCACCTAGAGACAGGACGTTTTCCACAGTGCCTGCCAGGT
AGCGAGCTTGGATGCCAGCTTAGCTCTTCCATCTCGTCACGCAACCTGACCTCAGCCATGGCAT
CCCTCTGGTCCAAAGAGCATTCCTGTGCCCCTCATCTCTTCCCACTGATGCGCTGGGGTAGGAA
GTGGGCCCACCCCCACTCTTATCCTTCTGTCCATCTTCCCTCAGTGCTGCTCTTCCAAACCTGG
TTCCCAAGCTGTAGCATCCATGAGGACTGTGGTACGGGAAGCTGGAGAAGTACCATTATGTCCT
CGCTCGCCTATTCTGAGCTCACCAGCAAGGCCACCTGGATGCGCCCAGGTCCTCAGGCACCGGC
TGCCTGACACCATGGTGCATGGCTTTGCTAAAAGCTAGTGCTAGAACCTGGAACCCAGAGGATT
TGTGCTGCCTGCATGGGCCTAATGTCCTCTGAGCTGCCCCTAAACCCTGTCAGGACTGGCACCA
GCTCGTGCCCACACTCATGGTGGTTCTGTGGTGAGAGGGTGGGCAGGGTGTCTGCTCCAGGTCT
GCTGCTCTGGTGAGAAGATGCTGAAGGCCTTAATTATGTCTTACTGGGTAAAGGATTTGGTTCA
GAAGGACAAGCTGGACACTGCACGTGCCACACTTTCAGAGAGCCTGGGGGAAAGTGTGTTCTGA
GGGCCCTGTGGGGCCAAGGGGGACCAGCCTCACATTCCACACGTGTGCCACTCTGCTTGGAGCC
TATTTATTTTGTATTTATTTGAACAGAGTTATGTCCTAACTATTTTTATAGATTTGTTTAATTA
ATAGCCTGTCATTTTCAAGTTCATTTTTTTTATTCATATTTATGTTCATGGTTGATTGTACCTT
CCTGTCACCAGCTGGTGGGGCATGGGGAGACAAGGTAGAAAAGTGGCCACAGAGTGACCTTACC
TGCTGCCCACACTGACGGCATGTCCGTCTCACAGGAAACAGAAGGAAAGGCACAGGGAGGACTC
TTCAGGCCAGGTAGGGTAGTGGGAAAGGTGGCGACTTCTTGACATTCTTTCCTGGACCGGGAGG
TTTTCTTTATTTTGCCCTTTTGGAAAACACGGCAGTGAGGTGCTTCATTCACCAGGAATTTGGT
GTGAGGGTGAGGACTGAAGGGCCTGCCTTCCCCAACCTGTGACCTGGTCTCGCTCCTGGCCCGA
GACTGCCCATGCTCAATGAGTGGCCAGCTGGCCACTTGGCAATCATGCCTCCATTGCCCCAGAA
TGGCCTGATGAGGAAAATCCAAATAGGATGCAAAGATCAATGCAAAAGTCACCAGTCTGCATAG
TCTGTGCTGTAACTGGAGTTTGTCAAAGACGAGCAACCTTCTAATAAAGTCGCTTCAAATGTGA
AAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006233931 ⟹ XP_006233993

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	15,708,702 - 15,742,195 (-)	NCBI
Rnor_6.0	3	11,442,396 - 11,476,186 (-)	NCBI
Rnor_5.0	3	16,791,266 - 16,825,049 (-)	NCBI

Sequence:

show sequence

CTCCAGTCTGCCGGCTTCTCGGAGCCCGCGCTTGCTGTCTCAGGAGTGCCGGCGTGCTTCCGCG
CTCGGGTCGCCCTCCTGCCGCCTTCAGCCCCGCGTCCGGCGCCCCCGCTTCGCGCCCGATGGTG
AGCAGTGTGTTGTGCCGCTGCGTGGCCTCCCCGCCGCCGGACGCCACCGCCACCGCCTCGTCGT
CCGCCTCGTCGCCGGCTTCTGTAGGGGACCCGTGTGGCGGCGCCGTCTGTGGCGGCCCGGACCA
CCAACTGCGCCTGTGGAGCCTCTTCCAAACACTCGACGTCAACCGCGACGGCGGCCTGTGTGTC
AACGACCTGGCGGTGGGGCTGCGGCGCCTGGGACTGCACCGCACGGAGGGCGAGCTCCGGAAAA
TTGTGCAAGCAGGTGACAAGGACCTTGATGGGCAACTGGACTTCGAAGAGTTTGTACATTACCT
CCAAGACCATGAGAAAAAACTGAGGCTGGTGTTTAAGAGTCTGGACAAAAAGAATGATGGGCGA
ATCGATGCTCAGGAGATCATGCAGTCCCTGCGGGATCTGGGTGTCAAGATCTCTGAACAGCAGG
CGGAGAAGATTCTTAAGAGAATACGGACGGGCCACTTCTGGGGCCCTGTCACCTACATGGATAA
GAATGGGACAATGACCATCGACTGGAACGAGTGGAGGGACTACCACCTCCTGCACCCTGTGGAG
AACATCCCTGAGATCATCCTGTACTGGAAGCACTCGACGATCTTCGATGTTGGTGAGAATCTGA
CAGTCCCAGATGAGTTCACAGTGGAGGAGAGGCAGACAGGGATGTGGTGGAGGCACCTGGTGGC
AGGAGGTGGTGCAGGGGCAGTTTCCAGAACCTGCACTGCCCCCCTGGACAGACTGAAGGTGCTC
ATGCAGGTCCATGCCTCCCGCAGCAACAACATGTGCATCATAGGTGGATTCACACAGATGATTC
GAGAAGGGGGCGCCAAGTCCCTCTGGAGGGGCAATGGCATCAATGTCCTCAAAATTGCCCCTGA
GTCAGCCATCAAGTTCATGGCATATGAGCAGATGAAACGCCTTGTTGGTAGTGATCAGGAGACG
CTGAGGATCCACGAAAGGCTAGTGGCAGGCTCCTTGGCTGGGGCCATTGCCCAGAGTAGCATCT
ACCCAATGGAGGTTCTGAAGACCCGAATGGCCCTGCGGAAAACAGGCCAGTACTCGGGAATGCT
GGACTGTGCCAAGAGGATCCTGGCTAAAGAGGGTGTGGCTGCCTTCTATAAAGGCTACATCCCC
AACATGCTGGGGATCATCCCGTATGCGGGCATCGATCTAGCTGTCTATGAGACATTGAAAAATA
CCTGGCTACAGCGCTATGCTGTAAACAGTGCAGACCCTGGCGTGTTTGTTCTCCTGGCCTGTGG
CACAATCTCCAGTACCTGTGGCCAACTGGCCAGCTACCCACTAGCCCTGGTCAGGACTCGGATG
CAGGCACAAGCCTCCATTGAGGGTGCACCTGAGGTAACCATGAGCAGCCTCTTCAAACAGATTC
TGCGGACTGAGGGGGCCTTTGGGCTCTACCGGGGGCTGGCCCCCAACTTCATGAAGGTGATTCC
AGCTGTGAGCATCAGCTACGTGGTCTACGAGAACCTGAAGATCACCCTGGGCGTGCAGTCTCGG
TGACGGGAGGGTGGCGGACTTGGTGACCCTGGGCTGCAGCCCAGGGTGTGCAGCCGCCTCATTC
TGTGAATGTGCCAACACTAAGCTGACTTACCCAAGCTGTGAAACCCAGGATGCTGCAGGGGACG
GGCAGGGAGCTGCAAGCGCTGGGCTGGTCCTGCTGACCTGGCAGACCTTTGTGTCTCTTCCAAG
GAAGACCTGTGGACATTCCTTGGGGTCCAGGGGTCAGTAAGATGTGGGCTCCTGCACCTAGAGA
CAGGACGTTTTCCACAGTGCCTGCCAGGTAGCGAGCTTGGATGCCAGCTTAGCTCTTCCATCTC
GTCACGCAACCTGACCTCAGCCATGGCATCCCTCTGGTCCAAAGAGCATTCCTGTGCCCCTCAT
CTCTTCCCACTGATGCGCTGGGGTAGGAAGTGGGCCCACCCCCACTCTTGTCCTTCTGTCCATC
TTCCCTCAGTGCTGCTCTTCCAAACCTGGTTCCCAAGCTGTAGCATCCATGAGGACTGTGGTAC
GGGAAGCTGGAGAAGTACCATTATGTCCTCGCTCGCCTATTCTGAGCTCACCAGCAAGGCCACC
TGGATGCGCCCAGGTCCTCAGGCACCGGCTGCCTGACACCATGGTGCATGGCTTTGCTAAAAGC
TAGTGCTAGAACCTGGAACCCAGAGGATTTGTGCTGCCTGCATGGGCCTAATGTCCTCTGAGCT
GCCCCTAAACCCTGTCAGGACTGGCACCAGCTCGTGCCCACACTCATGGTGGTTCTGTGGTGAG
AGGGTGGGCAGGGTGTCTGCTCCAGGTCTGCTGCTCTGGTGAGAAGATGCTGAAGGCCTTAATT
ATGTCTTACTGGGTAAAGGATTTGGTTCAGAAGGACAAGCTGGACACTGCACGTGCCACACTTT
CAGAGAGCCTGGGGGAAAGTGTGTTCTGAGGGCCCTGTGGGGCCAAGGGGGACCAGCCTCACAT
TCCACACGTGCGCCACTCTGCTTGGAGCCTATTTATTTTGTATTTATTTGAACAGAGTTATGTC
CTAACTATTTTTATAGATTTGTTTAATTAATAGCCTGTCATTTTCAAGTTCATTTTTTTTATTC
ATATTTATGTTCATGGTTGATTGTACCTTCCTGTCACCAGCTGGTGGGGCATGGGGAGACAAGG
TAGAAAAGTGGCCACAGAGTGACCTTACCTGCTGCCCACACTGACGGCATGTCCGTCTCACAGG
AAACAGAAGGAAAGGCACAGGGAGGACTCTTCAGGCCAGGTAGGGTAGTGGGAAAGGTGGCGAC
TTCTTGACATTCTTTCCTGGACCGGGAGGTTTTCTTTATTTTGCCCTTTTGGAAAACACGGCAG
TGAGGTGCTTCATTCACCAGGAATTTGGTGTGAGGGTGAGGACTGAAGGGCCTGCCTTCCCCAA
CCTGTGACCTGGTCTCGCTCCTGGCCCGAGACTGCCCATGCTCAATGAGTGGCCAGCTGGCCAC
TTGGCAATCATGCCTCCATTGCCCCAGAATGGCCTGATGAGGAAAATCCAAATAGGATGCAAAG
ATCAATGCAAAAGTCACCAGTCTGCATAGTCTGTGCTGTAACTGGAGTTTGTCAAAGACGAGCA
ACCTTCTAATAAAGTCGCTTCAAATGTGA

hide sequence

RefSeq Acc Id:

XM_006233932 ⟹ XP_006233994

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	15,708,702 - 15,742,193 (-)	NCBI
Rnor_6.0	3	11,442,396 - 11,476,185 (-)	NCBI
Rnor_5.0	3	16,791,266 - 16,825,049 (-)	NCBI

Sequence:

show sequence

TCCAGTCTGCCGGCTTCTCGGAGCCCGCGCTTGCTGTCTCAGGAGTGCCGGCGTGCTTCCGCGC
TCGGGTCGCCCTCCTGCCGCCTTCAGCCCCGCGTCCGGCGCCCCCGCTTCGCGCCCGATGGTGA
GCAGTGTGTTGTGCCGCTGCGTGGCCTCCCCGCCGCCGGACGCCACCGCCACCGCCTCGTCGTC
CGCCTCGTCGCCGGCTTCTGTAGGGGACCCGTGTGGCGGCGCCGTCTGTGGCGGCCCGGACCAC
CAACTGCGCCTGTGGAGCCTCTTCCAAACACTCGACGTCAACCGCGACGGCGGCCTGTGTGTCA
ACGACCTGGCGGTGGGGCTGCGGCGCCTGGGACTGCACCGCACGGAGGGCGAGCTCCGGAAAAT
TGTGCAAGCAGGTGACAAGGACCTTGATGGGCAACTGGACTTCGAAGAGTTTGTACATTACCTC
CAAGACCATGAGAAAAAACTGAGGCTGGTGTTTAAGAGTCTGGACAAAAAGAATGATGGGCGAA
TCGATGCTCAGGAGATCATGCAGTCCCTGCGGGATCTGGGTGTCAAGATCTCTGAACAGCAGGC
GGAGAAGATTCTTAAGAGCATGGATAAGAATGGGACAATGACCATCGACTGGAACGAGTGGAGG
GACTACCACCTCCTGCACCCTGTGGAGAACATCCCTGAGATCATCCTGTACTGGAAGCACTCGA
CGATCTTCGATGTTGGTGAGAATCTGACAGTCCCAGATGAGTTCACAGTGGAGGAGAGGCAGAC
AGGGATGTGGTGGAGGCACCTGGTGGCAGGAGGTGGTGCAGGGGCAGTTTCCAGAACCTGCACT
GCCCCCCTGGACAGACTGAAGGTGCTCATGCAGGTCCATGCCTCCCGCAGCAACAACATGTGCA
TCATAGGTGGATTCACACAGATGATTCGAGAAGGGGGCGCCAAGTCCCTCTGGAGGGGCAATGG
CATCAATGTCCTCAAAATTGCCCCTGAGTCAGCCATCAAGTTCATGGCATATGAGCAGATGAAA
CGCCTTGTTGGTAGTGATCAGGAGACGCTGAGGATCCACGAAAGGCTAGTGGCAGGCTCCTTGG
CTGGGGCCATTGCCCAGAGTAGCATCTACCCAATGGAGGTTCTGAAGACCCGAATGGCCCTGCG
GAAAACAGGCCAGTACTCGGGAATGCTGGACTGTGCCAAGAGGATCCTGGCTAAAGAGGGTGTG
GCTGCCTTCTATAAAGGCTACATCCCCAACATGCTGGGGATCATCCCGTATGCGGGCATCGATC
TAGCTGTCTATGAGACATTGAAAAATACCTGGCTACAGCGCTATGCTGTAAACAGTGCAGACCC
TGGCGTGTTTGTTCTCCTGGCCTGTGGCACAATCTCCAGTACCTGTGGCCAACTGGCCAGCTAC
CCACTAGCCCTGGTCAGGACTCGGATGCAGGCACAAGCCTCCATTGAGGGTGCACCTGAGGTAA
CCATGAGCAGCCTCTTCAAACAGATTCTGCGGACTGAGGGGGCCTTTGGGCTCTACCGGGGGCT
GGCCCCCAACTTCATGAAGGTGATTCCAGCTGTGAGCATCAGCTACGTGGTCTACGAGAACCTG
AAGATCACCCTGGGCGTGCAGTCTCGGTGACGGGAGGGTGGCGGACTTGGTGACCCTGGGCTGC
AGCCCAGGGTGTGCAGCCGCCTCATTCTGTGAATGTGCCAACACTAAGCTGACTTACCCAAGCT
GTGAAACCCAGGATGCTGCAGGGGACGGGCAGGGAGCTGCAAGCGCTGGGCTGGTCCTGCTGAC
CTGGCAGACCTTTGTGTCTCTTCCAAGGAAGACCTGTGGACATTCCTTGGGGTCCAGGGGTCAG
TAAGATGTGGGCTCCTGCACCTAGAGACAGGACGTTTTCCACAGTGCCTGCCAGGTAGCGAGCT
TGGATGCCAGCTTAGCTCTTCCATCTCGTCACGCAACCTGACCTCAGCCATGGCATCCCTCTGG
TCCAAAGAGCATTCCTGTGCCCCTCATCTCTTCCCACTGATGCGCTGGGGTAGGAAGTGGGCCC
ACCCCCACTCTTGTCCTTCTGTCCATCTTCCCTCAGTGCTGCTCTTCCAAACCTGGTTCCCAAG
CTGTAGCATCCATGAGGACTGTGGTACGGGAAGCTGGAGAAGTACCATTATGTCCTCGCTCGCC
TATTCTGAGCTCACCAGCAAGGCCACCTGGATGCGCCCAGGTCCTCAGGCACCGGCTGCCTGAC
ACCATGGTGCATGGCTTTGCTAAAAGCTAGTGCTAGAACCTGGAACCCAGAGGATTTGTGCTGC
CTGCATGGGCCTAATGTCCTCTGAGCTGCCCCTAAACCCTGTCAGGACTGGCACCAGCTCGTGC
CCACACTCATGGTGGTTCTGTGGTGAGAGGGTGGGCAGGGTGTCTGCTCCAGGTCTGCTGCTCT
GGTGAGAAGATGCTGAAGGCCTTAATTATGTCTTACTGGGTAAAGGATTTGGTTCAGAAGGACA
AGCTGGACACTGCACGTGCCACACTTTCAGAGAGCCTGGGGGAAAGTGTGTTCTGAGGGCCCTG
TGGGGCCAAGGGGGACCAGCCTCACATTCCACACGTGCGCCACTCTGCTTGGAGCCTATTTATT
TTGTATTTATTTGAACAGAGTTATGTCCTAACTATTTTTATAGATTTGTTTAATTAATAGCCTG
TCATTTTCAAGTTCATTTTTTTTATTCATATTTATGTTCATGGTTGATTGTACCTTCCTGTCAC
CAGCTGGTGGGGCATGGGGAGACAAGGTAGAAAAGTGGCCACAGAGTGACCTTACCTGCTGCCC
ACACTGACGGCATGTCCGTCTCACAGGAAACAGAAGGAAAGGCACAGGGAGGACTCTTCAGGCC
AGGTAGGGTAGTGGGAAAGGTGGCGACTTCTTGACATTCTTTCCTGGACCGGGAGGTTTTCTTT
ATTTTGCCCTTTTGGAAAACACGGCAGTGAGGTGCTTCATTCACCAGGAATTTGGTGTGAGGGT
GAGGACTGAAGGGCCTGCCTTCCCCAACCTGTGACCTGGTCTCGCTCCTGGCCCGAGACTGCCC
ATGCTCAATGAGTGGCCAGCTGGCCACTTGGCAATCATGCCTCCATTGCCCCAGAATGGCCTGA
TGAGGAAAATCCAAATAGGATGCAAAGATCAATGCAAAAGTCACCAGTCTGCATAGTCTGTGCT
GTAACTGGAGTTTGTCAAAGACGAGCAACCTTCTAATAAAGTCGCTTCAAATGTGA

hide sequence

RefSeq Acc Id:

XM_006233933 ⟹ XP_006233995

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	15,708,702 - 15,725,732 (-)	NCBI
Rnor_6.0	3	11,442,396 - 11,460,298 (-)	NCBI
Rnor_5.0	3	16,791,266 - 16,825,049 (-)	NCBI

Sequence:

show sequence

CAGTCTCTCTTGCCTGACAAGTCAGTGTGATCTCCAGCAGACAACTATCAATGCAGGCTTGCTT
TCTGCTTGGCTTGGGTTGGAGAAAATTGAATAATGGGAGGAGGGAGTGGTGCCAGTCGCTTAAG
AGGTGTTGTTGCTAAGGACCCTGGATCATGTTGAATGTAGTGAGTGGCATTCTGGAAGCTACCC
CGGGGAGAACGGGAAGCTGCTTCTAAAGATAAGCCTACTGGGATTCTGCAAAATGAACCTGGTC
TGTGCCTCCCGGTGGACTAGCTGGGCTGCAAGCAGGAAATACTCCGCCTGTGATTGGACGGTTG
ATGCTGGTCGGGGATAATGAACCTAGTAGTGTCGGCAGAGGTGATTGGCCAGGCCCTGCTGCAG
TGAGAATGCAGACTAGATGCTCTGTCCTAGGTTTACGGAATGAGCGAGGACGCGAGGACGGCTG
AATGACTGGGAGCCCCAAGTTGTCTGCGTCTCCGGGAGAGGTCTATCTGGATATTATTTTTGCT
TTACAAAAAGAACAAAAACGGAGCCAGGCCTTTGATCCCCCTGCCTGCTGAAGTGAGTTTTGAT
TGAAGTAGCCTAGCCGATCTTCTTACTGCCAGCAGCCGGGGAGGCTCCTAAGTGAGCTACTTCT
CAGGCTGGGCACAAGCAAGTGAATTTGAAAAAGCAGGACCAGCCCCTGCATGTAGAGCTTCAGC
CTGGAAACTCCCCAGTCAACCATGTAGCTAAAGACCCTTGGTATTGTGGTCACATCCCTAAGAA
GTGAGCAGTCATCAGCAGTTGGCATTCGGAGGAGGCTGGGATGCTACAGATGCTGTGGCACTTT
CTGTCTAGCTTTCTCCCTAGAGCTGGGTGCCAGGACTCCAGAGAGGGCATCGATCATGGAGTCA
GAGGCACTCAGGCCCCTGCTCAGGGAGACCAGATGTCCACCTTTTTGGGGAAACAAAGCGGAAG
GGCTGAGGCCACGGAAAAGAGACCCACTATCTTGCTGGTGGTCGGACCTGCAGAACAGTTTCCT
AAGAAAATTGTGCAAGCAGGTGACAAGGACCTTGATGGGCAACTGGACTTCGAAGAGTTTGTAC
ATTACCTCCAAGACCATGAGAAAAAACTGAGGCTGGTGTTTAAGAGTCTGGACAAAAAGAATGA
TGGGCGAATCGATGCTCAGGAGATCATGCAGTCCCTGCGGGATCTGGGTGTCAAGATCTCTGAA
CAGCAGGCGGAGAAGATTCTTAAGAGAATACGGACGGGCCACTTCTGGGGCCCTGTCACCTACA
TGGATAAGAATGGGACAATGACCATCGACTGGAACGAGTGGAGGGACTACCACCTCCTGCACCC
TGTGGAGAACATCCCTGAGATCATCCTGTACTGGAAGCACTCGACGATCTTCGATGTTGGTGAG
AATCTGACAGTCCCAGATGAGTTCACAGTGGAGGAGAGGCAGACAGGGATGTGGTGGAGGCACC
TGGTGGCAGGAGGTGGTGCAGGGGCAGTTTCCAGAACCTGCACTGCCCCCCTGGACAGACTGAA
GGTGCTCATGCAGGTCCATGCCTCCCGCAGCAACAACATGTGCATCATAGGTGGATTCACACAG
ATGATTCGAGAAGGGGGCGCCAAGTCCCTCTGGAGGGGCAATGGCATCAATGTCCTCAAAATTG
CCCCTGAGTCAGCCATCAAGTTCATGGCATATGAGCAGATGAAACGCCTTGTTGGTAGTGATCA
GGAGACGCTGAGGATCCACGAAAGGCTAGTGGCAGGCTCCTTGGCTGGGGCCATTGCCCAGAGT
AGCATCTACCCAATGGAGGTTCTGAAGACCCGAATGGCCCTGCGGAAAACAGGCCAGTACTCGG
GAATGCTGGACTGTGCCAAGAGGATCCTGGCTAAAGAGGGTGTGGCTGCCTTCTATAAAGGCTA
CATCCCCAACATGCTGGGGATCATCCCGTATGCGGGCATCGATCTAGCTGTCTATGAGACATTG
AAAAATACCTGGCTACAGCGCTATGCTGTAAACAGTGCAGACCCTGGCGTGTTTGTTCTCCTGG
CCTGTGGCACAATCTCCAGTACCTGTGGCCAACTGGCCAGCTACCCACTAGCCCTGGTCAGGAC
TCGGATGCAGGCACAAGCCTCCATTGAGGGTGCACCTGAGGTAACCATGAGCAGCCTCTTCAAA
CAGATTCTGCGGACTGAGGGGGCCTTTGGGCTCTACCGGGGGCTGGCCCCCAACTTCATGAAGG
TGATTCCAGCTGTGAGCATCAGCTACGTGGTCTACGAGAACCTGAAGATCACCCTGGGCGTGCA
GTCTCGGTGACGGGAGGGTGGCGGACTTGGTGACCCTGGGCTGCAGCCCAGGGTGTGCAGCCGC
CTCATTCTGTGAATGTGCCAACACTAAGCTGACTTACCCAAGCTGTGAAACCCAGGATGCTGCA
GGGGACGGGCAGGGAGCTGCAAGCGCTGGGCTGGTCCTGCTGACCTGGCAGACCTTTGTGTCTC
TTCCAAGGAAGACCTGTGGACATTCCTTGGGGTCCAGGGGTCAGTAAGATGTGGGCTCCTGCAC
CTAGAGACAGGACGTTTTCCACAGTGCCTGCCAGGTAGCGAGCTTGGATGCCAGCTTAGCTCTT
CCATCTCGTCACGCAACCTGACCTCAGCCATGGCATCCCTCTGGTCCAAAGAGCATTCCTGTGC
CCCTCATCTCTTCCCACTGATGCGCTGGGGTAGGAAGTGGGCCCACCCCCACTCTTGTCCTTCT
GTCCATCTTCCCTCAGTGCTGCTCTTCCAAACCTGGTTCCCAAGCTGTAGCATCCATGAGGACT
GTGGTACGGGAAGCTGGAGAAGTACCATTATGTCCTCGCTCGCCTATTCTGAGCTCACCAGCAA
GGCCACCTGGATGCGCCCAGGTCCTCAGGCACCGGCTGCCTGACACCATGGTGCATGGCTTTGC
TAAAAGCTAGTGCTAGAACCTGGAACCCAGAGGATTTGTGCTGCCTGCATGGGCCTAATGTCCT
CTGAGCTGCCCCTAAACCCTGTCAGGACTGGCACCAGCTCGTGCCCACACTCATGGTGGTTCTG
TGGTGAGAGGGTGGGCAGGGTGTCTGCTCCAGGTCTGCTGCTCTGGTGAGAAGATGCTGAAGGC
CTTAATTATGTCTTACTGGGTAAAGGATTTGGTTCAGAAGGACAAGCTGGACACTGCACGTGCC
ACACTTTCAGAGAGCCTGGGGGAAAGTGTGTTCTGAGGGCCCTGTGGGGCCAAGGGGGACCAGC
CTCACATTCCACACGTGCGCCACTCTGCTTGGAGCCTATTTATTTTGTATTTATTTGAACAGAG
TTATGTCCTAACTATTTTTATAGATTTGTTTAATTAATAGCCTGTCATTTTCAAGTTCATTTTT
TTTATTCATATTTATGTTCATGGTTGATTGTACCTTCCTGTCACCAGCTGGTGGGGCATGGGGA
GACAAGGTAGAAAAGTGGCCACAGAGTGACCTTACCTGCTGCCCACACTGACGGCATGTCCGTC
TCACAGGAAACAGAAGGAAAGGCACAGGGAGGACTCTTCAGGCCAGGTAGGGTAGTGGGAAAGG
TGGCGACTTCTTGACATTCTTTCCTGGACCGGGAGGTTTTCTTTATTTTGCCCTTTTGGAAAAC
ACGGCAGTGAGGTGCTTCATTCACCAGGAATTTGGTGTGAGGGTGAGGACTGAAGGGCCTGCCT
TCCCCAACCTGTGACCTGGTCTCGCTCCTGGCCCGAGACTGCCCATGCTCAATGAGTGGCCAGC
TGGCCACTTGGCAATCATGCCTCCATTGCCCCAGAATGGCCTGATGAGGAAAATCCAAATAGGA
TGCAAAGATCAATGCAAAAGTCACCAGTCTGCATAGTCTGTGCTGTAACTGGAGTTTGTCAAAG
ACGAGCAACCTTCTAATAAAGTCGCTTCAAATGTGA

hide sequence

RefSeq Acc Id:

XM_006233934 ⟹ XP_006233996

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	15,708,702 - 15,725,732 (-)	NCBI
Rnor_6.0	3	11,442,396 - 11,460,297 (-)	NCBI
Rnor_5.0	3	16,791,266 - 16,825,049 (-)	NCBI

Sequence:

show sequence

AGTCTCTCTTGCCTGACAAGTCAGTGTGATCTCCAGCAGACAACTATCAATGCAGGCTTGCTTT
CTGCTTGGCTTGGGTTGGAGAAAATTGAATAATGGGAGGAGGGAGTGGTGCCAGTCGCTTAAGA
GGTGTTGTTGCTAAGGACCCTGGATCATGTTGAATGTAGTGAGTGGCATTCTGGAAGCTACCCC
GGGGAGAACGGGAAGCTGCTTCTAAAGATAAGCCTACTGGGATTCTGCAAAATGAACCTGGTCT
GTGCCTCCCGGTGGACTAGCTGGGCTGCAAGCAGGAAATACTCCGCCTGTGATTGGACGGTTGA
TGCTGGTCGGGGATAATGAACCTAGTAGTGTCGGCAGAGGTGATTGGCCAGGCCCTGCTGCAGT
GAGAATGCAGACTAGATGCTCTGTCCTAGGTTTACGGAATGAGCGAGGACGCGAGGACGGCTGA
ATGACTGGGAGCCCCAAGTTGTCTGCGTCTCCGGGAGAGGTCTATCTGGATATTATTTTTGCTT
TACAAAAAGAACAAAAACGGAGCCAGGCCTTTGATCCCCCTGCCTGCTGAAGTGAGTTTTGATT
GAAGTAGCCTAGCCGATCTTCTTACTGCCAGCAGCCGGGGAGGCTCCTAAGTGAGCTACTTCTC
AGGCTGGGCACAAGCAAGTGAATTTGAAAAAGCAGGACCAGCCCCTGCATGTAGAGCTTCAGCC
TGGAAACTCCCCAGTCAACCATGTAGCTAAAGACCCTTGGTATTGTGGTCACATCCCTAAGAAG
TGAGCAGTCATCAGCAGTTGGCATTCGGAGGAGGCTGGGATGCTACAGATGCTGTGGCACTTTC
TGTCTAGCTTTCTCCCTAGAGCTGGGTGCCAGGACTCCAGAGAGGGCATCGATCATGGAGTCAG
AGGCACTCAGGCCCCTGCTCAGGGAGACCAGATGTCCACCTTTTTGGGGAAACAAAGCGGAAGG
GCTGAGGCCACGGAAAAGAGACCCACTATCTTGCTGGTGGTCGGACCTGCAGAACAGTTTCCTA
AGAAAATTGTGCAAGCAGGTGACAAGGACCTTGATGGGCAACTGGACTTCGAAGAGTTTGTACA
TTACCTCCAAGACCATGAGAAAAAACTGAGGCTGGTGTTTAAGAGTCTGGACAAAAAGAATGAT
GGGCGAATCGATGCTCAGGAGATCATGCAGTCCCTGCGGGATCTGGGTGTCAAGATCTCTGAAC
AGCAGGCGGAGAAGATTCTTAAGAGCATGGATAAGAATGGGACAATGACCATCGACTGGAACGA
GTGGAGGGACTACCACCTCCTGCACCCTGTGGAGAACATCCCTGAGATCATCCTGTACTGGAAG
CACTCGACGATCTTCGATGTTGGTGAGAATCTGACAGTCCCAGATGAGTTCACAGTGGAGGAGA
GGCAGACAGGGATGTGGTGGAGGCACCTGGTGGCAGGAGGTGGTGCAGGGGCAGTTTCCAGAAC
CTGCACTGCCCCCCTGGACAGACTGAAGGTGCTCATGCAGGTCCATGCCTCCCGCAGCAACAAC
ATGTGCATCATAGGTGGATTCACACAGATGATTCGAGAAGGGGGCGCCAAGTCCCTCTGGAGGG
GCAATGGCATCAATGTCCTCAAAATTGCCCCTGAGTCAGCCATCAAGTTCATGGCATATGAGCA
GATGAAACGCCTTGTTGGTAGTGATCAGGAGACGCTGAGGATCCACGAAAGGCTAGTGGCAGGC
TCCTTGGCTGGGGCCATTGCCCAGAGTAGCATCTACCCAATGGAGGTTCTGAAGACCCGAATGG
CCCTGCGGAAAACAGGCCAGTACTCGGGAATGCTGGACTGTGCCAAGAGGATCCTGGCTAAAGA
GGGTGTGGCTGCCTTCTATAAAGGCTACATCCCCAACATGCTGGGGATCATCCCGTATGCGGGC
ATCGATCTAGCTGTCTATGAGACATTGAAAAATACCTGGCTACAGCGCTATGCTGTAAACAGTG
CAGACCCTGGCGTGTTTGTTCTCCTGGCCTGTGGCACAATCTCCAGTACCTGTGGCCAACTGGC
CAGCTACCCACTAGCCCTGGTCAGGACTCGGATGCAGGCACAAGCCTCCATTGAGGGTGCACCT
GAGGTAACCATGAGCAGCCTCTTCAAACAGATTCTGCGGACTGAGGGGGCCTTTGGGCTCTACC
GGGGGCTGGCCCCCAACTTCATGAAGGTGATTCCAGCTGTGAGCATCAGCTACGTGGTCTACGA
GAACCTGAAGATCACCCTGGGCGTGCAGTCTCGGTGACGGGAGGGTGGCGGACTTGGTGACCCT
GGGCTGCAGCCCAGGGTGTGCAGCCGCCTCATTCTGTGAATGTGCCAACACTAAGCTGACTTAC
CCAAGCTGTGAAACCCAGGATGCTGCAGGGGACGGGCAGGGAGCTGCAAGCGCTGGGCTGGTCC
TGCTGACCTGGCAGACCTTTGTGTCTCTTCCAAGGAAGACCTGTGGACATTCCTTGGGGTCCAG
GGGTCAGTAAGATGTGGGCTCCTGCACCTAGAGACAGGACGTTTTCCACAGTGCCTGCCAGGTA
GCGAGCTTGGATGCCAGCTTAGCTCTTCCATCTCGTCACGCAACCTGACCTCAGCCATGGCATC
CCTCTGGTCCAAAGAGCATTCCTGTGCCCCTCATCTCTTCCCACTGATGCGCTGGGGTAGGAAG
TGGGCCCACCCCCACTCTTGTCCTTCTGTCCATCTTCCCTCAGTGCTGCTCTTCCAAACCTGGT
TCCCAAGCTGTAGCATCCATGAGGACTGTGGTACGGGAAGCTGGAGAAGTACCATTATGTCCTC
GCTCGCCTATTCTGAGCTCACCAGCAAGGCCACCTGGATGCGCCCAGGTCCTCAGGCACCGGCT
GCCTGACACCATGGTGCATGGCTTTGCTAAAAGCTAGTGCTAGAACCTGGAACCCAGAGGATTT
GTGCTGCCTGCATGGGCCTAATGTCCTCTGAGCTGCCCCTAAACCCTGTCAGGACTGGCACCAG
CTCGTGCCCACACTCATGGTGGTTCTGTGGTGAGAGGGTGGGCAGGGTGTCTGCTCCAGGTCTG
CTGCTCTGGTGAGAAGATGCTGAAGGCCTTAATTATGTCTTACTGGGTAAAGGATTTGGTTCAG
AAGGACAAGCTGGACACTGCACGTGCCACACTTTCAGAGAGCCTGGGGGAAAGTGTGTTCTGAG
GGCCCTGTGGGGCCAAGGGGGACCAGCCTCACATTCCACACGTGCGCCACTCTGCTTGGAGCCT
ATTTATTTTGTATTTATTTGAACAGAGTTATGTCCTAACTATTTTTATAGATTTGTTTAATTAA
TAGCCTGTCATTTTCAAGTTCATTTTTTTTATTCATATTTATGTTCATGGTTGATTGTACCTTC
CTGTCACCAGCTGGTGGGGCATGGGGAGACAAGGTAGAAAAGTGGCCACAGAGTGACCTTACCT
GCTGCCCACACTGACGGCATGTCCGTCTCACAGGAAACAGAAGGAAAGGCACAGGGAGGACTCT
TCAGGCCAGGTAGGGTAGTGGGAAAGGTGGCGACTTCTTGACATTCTTTCCTGGACCGGGAGGT
TTTCTTTATTTTGCCCTTTTGGAAAACACGGCAGTGAGGTGCTTCATTCACCAGGAATTTGGTG
TGAGGGTGAGGACTGAAGGGCCTGCCTTCCCCAACCTGTGACCTGGTCTCGCTCCTGGCCCGAG
ACTGCCCATGCTCAATGAGTGGCCAGCTGGCCACTTGGCAATCATGCCTCCATTGCCCCAGAAT
GGCCTGATGAGGAAAATCCAAATAGGATGCAAAGATCAATGCAAAAGTCACCAGTCTGCATAGT
CTGTGCTGTAACTGGAGTTTGTCAAAGACGAGCAACCTTCTAATAAAGTCGCTTCAAATGTGA

hide sequence

RefSeq Acc Id:

XM_006233935 ⟹ XP_006233997

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	15,708,702 - 15,719,320 (-)	NCBI
Rnor_6.0	3	11,442,396 - 11,453,058 (-)	NCBI
Rnor_5.0	3	16,791,266 - 16,825,049 (-)	NCBI

Sequence:

show sequence

CTCACCTTGGCTAACCCCAGTGATTGATGGAAGTGATTCCCAGGCACTGCATGTGTGTGAATTG
TTGGGTTTGTGTTCCAGGACAGCTGGGGACGTGGCATTCAGATCTCTCTCCCGAGGTAGCCTGT
GTTGATTTTTAACATCTCTGATTCAGTCTCTGTTTCCACCGAGTTTTCAGTTGGGAATGATTTA
CTAAGAGGAGAGAGCTGCTATACAGGGTGACGCATTTGAGGGCCTTGTATGAGAACAGACACTT
GGCGGTTTGTTTGTTTGGAGGGGTTGACAGCTGGGGTGAAGGTTTGTTTGGGCATGGGACTGCG
ACCTTAGGCAGTGCCTGCTGCCTGGGCTCCAAGAGTTAACTCTGCAAGCAGTGACGTCAGTCCT
GATCTTTGCTCTTCTGCTCTTGAGCAACCTGATACTGCCGGCTGCCGGGGACTGTTCATTGGCT
GCTGACTGTGCGCACAGTGGGCGGAATTTTTTTCAATTAAGTAAAAGGGCAGGACTTAAGCAGC
CAGTGACAGCGGAGGCCGGCATATCTTGTGCTAGTTTCCCAGGAACCCGGCATTCCCTACTCTT
GACTTCTGCCGGCACTTGCTCCTGGTGGTAGCTGAGCACCGGGTCTCACCAGCATGCTCTGCCT
GTGCCTGTATGTGCCCATCGCTGGAGAGGCTCAGACTGAATTCCAATACTTTGAGTCCAAGGGG
CTTCCCACCGAGCTGAAATCCATCTTCAAACTCAGTGTCTTTATCCCCTCTCAGGAGTTCTCCA
CATACCGCCAATGGAAGCAGAAAATTGTGCAAGCAGGTGACAAGGACCTTGATGGGCAACTGGA
CTTCGAAGAGTTTGTACATTACCTCCAAGACCATGAGAAAAAACTGAGGCTGGTGTTTAAGAGT
CTGGACAAAAAGAATGATGGGCGAATCGATGCTCAGGAGATCATGCAGTCCCTGCGGGATCTGG
GTGTCAAGATCTCTGAACAGCAGGCGGAGAAGATTCTTAAGAGAATACGGACGGGCCACTTCTG
GGGCCCTGTCACCTACATGGATAAGAATGGGACAATGACCATCGACTGGAACGAGTGGAGGGAC
TACCACCTCCTGCACCCTGTGGAGAACATCCCTGAGATCATCCTGTACTGGAAGCACTCGACGA
TCTTCGATGTTGGTGAGAATCTGACAGTCCCAGATGAGTTCACAGTGGAGGAGAGGCAGACAGG
GATGTGGTGGAGGCACCTGGTGGCAGGAGGTGGTGCAGGGGCAGTTTCCAGAACCTGCACTGCC
CCCCTGGACAGACTGAAGGTGCTCATGCAGGTCCATGCCTCCCGCAGCAACAACATGTGCATCA
TAGGTGGATTCACACAGATGATTCGAGAAGGGGGCGCCAAGTCCCTCTGGAGGGGCAATGGCAT
CAATGTCCTCAAAATTGCCCCTGAGTCAGCCATCAAGTTCATGGCATATGAGCAGATGAAACGC
CTTGTTGGTAGTGATCAGGAGACGCTGAGGATCCACGAAAGGCTAGTGGCAGGCTCCTTGGCTG
GGGCCATTGCCCAGAGTAGCATCTACCCAATGGAGGTTCTGAAGACCCGAATGGCCCTGCGGAA
AACAGGCCAGTACTCGGGAATGCTGGACTGTGCCAAGAGGATCCTGGCTAAAGAGGGTGTGGCT
GCCTTCTATAAAGGCTACATCCCCAACATGCTGGGGATCATCCCGTATGCGGGCATCGATCTAG
CTGTCTATGAGACATTGAAAAATACCTGGCTACAGCGCTATGCTGTAAACAGTGCAGACCCTGG
CGTGTTTGTTCTCCTGGCCTGTGGCACAATCTCCAGTACCTGTGGCCAACTGGCCAGCTACCCA
CTAGCCCTGGTCAGGACTCGGATGCAGGCACAAGCCTCCATTGAGGGTGCACCTGAGGTAACCA
TGAGCAGCCTCTTCAAACAGATTCTGCGGACTGAGGGGGCCTTTGGGCTCTACCGGGGGCTGGC
CCCCAACTTCATGAAGGTGATTCCAGCTGTGAGCATCAGCTACGTGGTCTACGAGAACCTGAAG
ATCACCCTGGGCGTGCAGTCTCGGTGACGGGAGGGTGGCGGACTTGGTGACCCTGGGCTGCAGC
CCAGGGTGTGCAGCCGCCTCATTCTGTGAATGTGCCAACACTAAGCTGACTTACCCAAGCTGTG
AAACCCAGGATGCTGCAGGGGACGGGCAGGGAGCTGCAAGCGCTGGGCTGGTCCTGCTGACCTG
GCAGACCTTTGTGTCTCTTCCAAGGAAGACCTGTGGACATTCCTTGGGGTCCAGGGGTCAGTAA
GATGTGGGCTCCTGCACCTAGAGACAGGACGTTTTCCACAGTGCCTGCCAGGTAGCGAGCTTGG
ATGCCAGCTTAGCTCTTCCATCTCGTCACGCAACCTGACCTCAGCCATGGCATCCCTCTGGTCC
AAAGAGCATTCCTGTGCCCCTCATCTCTTCCCACTGATGCGCTGGGGTAGGAAGTGGGCCCACC
CCCACTCTTGTCCTTCTGTCCATCTTCCCTCAGTGCTGCTCTTCCAAACCTGGTTCCCAAGCTG
TAGCATCCATGAGGACTGTGGTACGGGAAGCTGGAGAAGTACCATTATGTCCTCGCTCGCCTAT
TCTGAGCTCACCAGCAAGGCCACCTGGATGCGCCCAGGTCCTCAGGCACCGGCTGCCTGACACC
ATGGTGCATGGCTTTGCTAAAAGCTAGTGCTAGAACCTGGAACCCAGAGGATTTGTGCTGCCTG
CATGGGCCTAATGTCCTCTGAGCTGCCCCTAAACCCTGTCAGGACTGGCACCAGCTCGTGCCCA
CACTCATGGTGGTTCTGTGGTGAGAGGGTGGGCAGGGTGTCTGCTCCAGGTCTGCTGCTCTGGT
GAGAAGATGCTGAAGGCCTTAATTATGTCTTACTGGGTAAAGGATTTGGTTCAGAAGGACAAGC
TGGACACTGCACGTGCCACACTTTCAGAGAGCCTGGGGGAAAGTGTGTTCTGAGGGCCCTGTGG
GGCCAAGGGGGACCAGCCTCACATTCCACACGTGCGCCACTCTGCTTGGAGCCTATTTATTTTG
TATTTATTTGAACAGAGTTATGTCCTAACTATTTTTATAGATTTGTTTAATTAATAGCCTGTCA
TTTTCAAGTTCATTTTTTTTATTCATATTTATGTTCATGGTTGATTGTACCTTCCTGTCACCAG
CTGGTGGGGCATGGGGAGACAAGGTAGAAAAGTGGCCACAGAGTGACCTTACCTGCTGCCCACA
CTGACGGCATGTCCGTCTCACAGGAAACAGAAGGAAAGGCACAGGGAGGACTCTTCAGGCCAGG
TAGGGTAGTGGGAAAGGTGGCGACTTCTTGACATTCTTTCCTGGACCGGGAGGTTTTCTTTATT
TTGCCCTTTTGGAAAACACGGCAGTGAGGTGCTTCATTCACCAGGAATTTGGTGTGAGGGTGAG
GACTGAAGGGCCTGCCTTCCCCAACCTGTGACCTGGTCTCGCTCCTGGCCCGAGACTGCCCATG
CTCAATGAGTGGCCAGCTGGCCACTTGGCAATCATGCCTCCATTGCCCCAGAATGGCCTGATGA
GGAAAATCCAAATAGGATGCAAAGATCAATGCAAAAGTCACCAGTCTGCATAGTCTGTGCTGTA
ACTGGAGTTTGTCAAAGACGAGCAACCTTCTAATAAAGTCGCTTCAAATGTGA

hide sequence

RefSeq Acc Id:

XM_017591471 ⟹ XP_017446960

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	15,708,702 - 15,726,223 (-)	NCBI
Rnor_6.0	3	11,442,396 - 11,460,296 (-)	NCBI

Sequence:

show sequence

GTCTCTCTTGCCTGACAAGTCAGTGTGATCTCCAGCAGACAACTATCAATGCAGGCTTGCTTTC
TGCTTGGCTTGGGTTGGAGAAAATTGAATAATGGGAGGAGGGAGTGGTGCCAGTCGCTTAAGAG
GTGTTGTTGCTAAGGACCCTGGATCATGTTGAATGTAGTGAGTGGCATTCTGGAAGCTACCCCG
GGGAGAACGGGAAGCTGCTTCTAAAGATAAGCCTACTGGGATTCTGCAAAATGAACCTGGTCTG
TGCCTCCCGGTGGACTAGCTGGGCTGCAAGCAGGAAATACTCCGCCTGTGATTGGACGGTTGAT
GCTGGTCGGGGATAATGAACCTAGTAGTGTCGGCAGAGGTGATTGGCCAGGCCCTGCTGCAGTG
AGAATGCAGACTAGATGCTCTGTCCTAGGTTTACGGAATGAGCGAGGACGCGAGGACGGCTGAA
TGACTGGGAGCCCCAAGTTGTCTGCGTCTCCGGGAGAGGTCTATCTGGATATTATTTTTGCTTT
ACAAAAAGAACAAAAACGGAGCCAGGCCTTTGATCCCCCTGCCTGCTGAAAAAATTGTGCAAGC
AGGTGACAAGGACCTTGATGGGCAACTGGACTTCGAAGAGTTTGTACATTACCTCCAAGACCAT
GAGAAAAAACTGAGGCTGGTGTTTAAGAGTCTGGACAAAAAGAATGATGGGCGAATCGATGCTC
AGGAGATCATGCAGTCCCTGCGGGATCTGGGTGTCAAGATCTCTGAACAGCAGGCGGAGAAGAT
TCTTAAGAGAATACGGACGGGCCACTTCTGGGGCCCTGTCACCTACATGGATAAGAATGGGACA
ATGACCATCGACTGGAACGAGTGGAGGGACTACCACCTCCTGCACCCTGTGGAGAACATCCCTG
AGATCATCCTGTACTGGAAGCACTCGACGATCTTCGATGTTGGTGAGAATCTGACAGTCCCAGA
TGAGTTCACAGTGGAGGAGAGGCAGACAGGGATGTGGTGGAGGCACCTGGTGGCAGGAGGTGGT
GCAGGGGCAGTTTCCAGAACCTGCACTGCCCCCCTGGACAGACTGAAGGTGCTCATGCAGGTCC
ATGCCTCCCGCAGCAACAACATGTGCATCATAGGTGGATTCACACAGATGATTCGAGAAGGGGG
CGCCAAGTCCCTCTGGAGGGGCAATGGCATCAATGTCCTCAAAATTGCCCCTGAGTCAGCCATC
AAGTTCATGGCATATGAGCAGATGAAACGCCTTGTTGGTAGTGATCAGGAGACGCTGAGGATCC
ACGAAAGGCTAGTGGCAGGCTCCTTGGCTGGGGCCATTGCCCAGAGTAGCATCTACCCAATGGA
GGTTCTGAAGACCCGAATGGCCCTGCGGAAAACAGGCCAGTACTCGGGAATGCTGGACTGTGCC
AAGAGGATCCTGGCTAAAGAGGGTGTGGCTGCCTTCTATAAAGGCTACATCCCCAACATGCTGG
GGATCATCCCGTATGCGGGCATCGATCTAGCTGTCTATGAGACATTGAAAAATACCTGGCTACA
GCGCTATGCTGTAAACAGTGCAGACCCTGGCGTGTTTGTTCTCCTGGCCTGTGGCACAATCTCC
AGTACCTGTGGCCAACTGGCCAGCTACCCACTAGCCCTGGTCAGGACTCGGATGCAGGCACAAG
CCTCCATTGAGGGTGCACCTGAGGTAACCATGAGCAGCCTCTTCAAACAGATTCTGCGGACTGA
GGGGGCCTTTGGGCTCTACCGGGGGCTGGCCCCCAACTTCATGAAGGTGATTCCAGCTGTGAGC
ATCAGCTACGTGGTCTACGAGAACCTGAAGATCACCCTGGGCGTGCAGTCTCGGTGACGGGAGG
GTGGCGGACTTGGTGACCCTGGGCTGCAGCCCAGGGTGTGCAGCCGCCTCATTCTGTGAATGTG
CCAACACTAAGCTGACTTACCCAAGCTGTGAAACCCAGGATGCTGCAGGGGACGGGCAGGGAGC
TGCAAGCGCTGGGCTGGTCCTGCTGACCTGGCAGACCTTTGTGTCTCTTCCAAGGAAGACCTGT
GGACATTCCTTGGGGTCCAGGGGTCAGTAAGATGTGGGCTCCTGCACCTAGAGACAGGACGTTT
TCCACAGTGCCTGCCAGGTAGCGAGCTTGGATGCCAGCTTAGCTCTTCCATCTCGTCACGCAAC
CTGACCTCAGCCATGGCATCCCTCTGGTCCAAAGAGCATTCCTGTGCCCCTCATCTCTTCCCAC
TGATGCGCTGGGGTAGGAAGTGGGCCCACCCCCACTCTTGTCCTTCTGTCCATCTTCCCTCAGT
GCTGCTCTTCCAAACCTGGTTCCCAAGCTGTAGCATCCATGAGGACTGTGGTACGGGAAGCTGG
AGAAGTACCATTATGTCCTCGCTCGCCTATTCTGAGCTCACCAGCAAGGCCACCTGGATGCGCC
CAGGTCCTCAGGCACCGGCTGCCTGACACCATGGTGCATGGCTTTGCTAAAAGCTAGTGCTAGA
ACCTGGAACCCAGAGGATTTGTGCTGCCTGCATGGGCCTAATGTCCTCTGAGCTGCCCCTAAAC
CCTGTCAGGACTGGCACCAGCTCGTGCCCACACTCATGGTGGTTCTGTGGTGAGAGGGTGGGCA
GGGTGTCTGCTCCAGGTCTGCTGCTCTGGTGAGAAGATGCTGAAGGCCTTAATTATGTCTTACT
GGGTAAAGGATTTGGTTCAGAAGGACAAGCTGGACACTGCACGTGCCACACTTTCAGAGAGCCT
GGGGGAAAGTGTGTTCTGAGGGCCCTGTGGGGCCAAGGGGGACCAGCCTCACATTCCACACGTG
CGCCACTCTGCTTGGAGCCTATTTATTTTGTATTTATTTGAACAGAGTTATGTCCTAACTATTT
TTATAGATTTGTTTAATTAATAGCCTGTCATTTTCAAGTTCATTTTTTTTATTCATATTTATGT
TCATGGTTGATTGTACCTTCCTGTCACCAGCTGGTGGGGCATGGGGAGACAAGGTAGAAAAGTG
GCCACAGAGTGACCTTACCTGCTGCCCACACTGACGGCATGTCCGTCTCACAGGAAACAGAAGG
AAAGGCACAGGGAGGACTCTTCAGGCCAGGTAGGGTAGTGGGAAAGGTGGCGACTTCTTGACAT
TCTTTCCTGGACCGGGAGGTTTTCTTTATTTTGCCCTTTTGGAAAACACGGCAGTGAGGTGCTT
CATTCACCAGGAATTTGGTGTGAGGGTGAGGACTGAAGGGCCTGCCTTCCCCAACCTGTGACCT
GGTCTCGCTCCTGGCCCGAGACTGCCCATGCTCAATGAGTGGCCAGCTGGCCACTTGGCAATCA
TGCCTCCATTGCCCCAGAATGGCCTGATGAGGAAAATCCAAATAGGATGCAAAGATCAATGCAA
AAGTCACCAGTCTGCATAGTCTGTGCTGTAACTGGAGTTTGTCAAAGACGAGCAACCTTCTAAT
AAAGTCGCTTCAAATGTGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_663710	(Get FASTA)	NCBI Sequence Viewer
	XP_006233993	(Get FASTA)	NCBI Sequence Viewer
	XP_006233994	(Get FASTA)	NCBI Sequence Viewer
	XP_006233995	(Get FASTA)	NCBI Sequence Viewer
	XP_006233996	(Get FASTA)	NCBI Sequence Viewer
	XP_006233997	(Get FASTA)	NCBI Sequence Viewer
	XP_017446960	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAL05592	(Get FASTA)	NCBI Sequence Viewer
	EDL93232	(Get FASTA)	NCBI Sequence Viewer
	EDL93233	(Get FASTA)	NCBI Sequence Viewer
	Q8K3P6	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_663710 ⟸ NM_145677

- UniProtKB:

Q8K3P6 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MLCLCLYVPIAGEAQTEFQYFESKGLPTELKSIFKLSVFIPSQEFSTYRQWKQKIVQAGDKDLD
GQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKSMDK
NGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVA
GGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGAKSLWRGNGINVLKIAPE
SAIKFMAYEQMKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGML
DCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACG
TISSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKQILRTEGAFGLYRGLAPNFMKVIP
AVSISYVVYENLKITLGVQSR

hide sequence

RefSeq Acc Id:

XP_006233993 ⟸ XM_006233931

- Peptide Label:

isoform X1

- Sequence:

show sequence

MVSSVLCRCVASPPPDATATASSSASSPASVGDPCGGAVCGGPDHQLRLWSLFQTLDVNRDGGL
CVNDLAVGLRRLGLHRTEGELRKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKND
GRIDAQEIMQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHP
VENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLK
VLMQVHASRSNNMCIIGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQ
ETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKRILAKEGVAAFYKGY
IPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRT
RMQAQASIEGAPEVTMSSLFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQ
SR

hide sequence

RefSeq Acc Id:	XP_006233994 ⟸ XM_006233932
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ALC5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVSSVLCRCVASPPPDATATASSSASSPASVGDPCGGAVCGGPDHQLRLWSLFQTLDVNRDGGL CVNDLAVGLRRLGLHRTEGELRKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKND GRIDAQEIMQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWK HSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNN MCIIGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHERLVAG SLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAG IDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASIEGAP EVTMSSLFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR hide sequence

RefSeq Acc Id:	XP_006233995 ⟸ XM_006233933
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AFK8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLQMLWHFLSSFLPRAGCQDSREGIDHGVRGTQAPAQGDQMSTFLGKQSGRAEATEKRPTILLV VGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLR DLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKH STIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNM CIIGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHERLVAGS LAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGI DLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASIEGAPE VTMSSLFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR hide sequence

RefSeq Acc Id:	XP_006233996 ⟸ XM_006233934
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6GFE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLQMLWHFLSSFLPRAGCQDSREGIDHGVRGTQAPAQGDQMSTFLGKQSGRAEATEKRPTILLV VGPAEQFPKKIVQAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLR DLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTV PDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIRE GGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYP MEVLKTRMALRKTGQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTW LQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKQILR TEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR hide sequence

RefSeq Acc Id:	XP_006233997 ⟸ XM_006233935
- Peptide Label:	isoform X5
- UniProtKB:	A0A8L2QB89 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLCLCLYVPIAGEAQTEFQYFESKGLPTELKSIFKLSVFIPSQEFSTYRQWKQKIVQAGDKDLD GQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVKISEQQAEKILKRIRT GHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEE RQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGAKSLWR GNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRM ALRKTGQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNS ADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKQILRTEGAFGLY RGLAPNFMKVIPAVSISYVVYENLKITLGVQSR hide sequence

RefSeq Acc Id:

XP_017446960 ⟸ XM_017591471

- Peptide Label:

isoform X6

- Sequence:

show sequence

MQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEII
LYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHAS
RSNNMCIIGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLVGSDQETLRIHER
LVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKRILAKEGVAAFYKGYIPNMLGII
PYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASI
EGAPEVTMSSLFKQILRTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKITLGVQSR

hide sequence

RefSeq Acc Id:

ENSRNOP00000020206 ⟸ ENSRNOT00000020206

RefSeq Acc Id:

ENSRNOP00000092658 ⟸ ENSRNOT00000102915

RefSeq Acc Id:

ENSRNOP00000092861 ⟸ ENSRNOT00000099400

RefSeq Acc Id:

ENSRNOP00000093449 ⟸ ENSRNOT00000107630

RefSeq Acc Id:

ENSRNOP00000087701 ⟸ ENSRNOT00000115249

RefSeq Acc Id:

ENSRNOP00000091438 ⟸ ENSRNOT00000104155

Protein Domains

EF-hand

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8K3P6-F1-model_v2	AlphaFold	Q8K3P6	1-469	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691987

Promoter ID:

EPDNEW_R2512

Type:

initiation region

Name:

Slc25a25_1

Description:

solute carrier family 25 member 25

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	11,452,542 - 11,452,602	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:628666	AgrOrtholog
BioCyc Gene	G2FUF-50137	BioCyc
Ensembl Genes	ENSRNOG00000014338	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000020206	ENTREZGENE
	ENSRNOP00000020206.5	UniProtKB/TrEMBL
	ENSRNOP00000087701	ENTREZGENE
	ENSRNOP00000087701.1	UniProtKB/TrEMBL
	ENSRNOP00000091438	ENTREZGENE
	ENSRNOP00000091438.1	UniProtKB/TrEMBL
	ENSRNOP00000092658.1	UniProtKB/TrEMBL
	ENSRNOP00000092861.1	UniProtKB/TrEMBL
	ENSRNOP00000093449	ENTREZGENE
	ENSRNOP00000093449.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000020206	ENTREZGENE
	ENSRNOT00000020206.6	UniProtKB/TrEMBL
	ENSRNOT00000099400.1	UniProtKB/TrEMBL
	ENSRNOT00000102915.1	UniProtKB/TrEMBL
	ENSRNOT00000104155	ENTREZGENE
	ENSRNOT00000104155.1	UniProtKB/TrEMBL
	ENSRNOT00000107630	ENTREZGENE
	ENSRNOT00000107630.1	UniProtKB/TrEMBL
	ENSRNOT00000115249	ENTREZGENE
	ENSRNOT00000115249.1	UniProtKB/TrEMBL
Gene3D-CATH	1.50.40.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	EF-hand-dom_pair	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Graves_DC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Mit_carrier	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Mitochondrial_sb/sol_carrier	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Mt_carrier_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:246771	UniProtKB/Swiss-Prot
NCBI Gene	246771	ENTREZGENE
Pfam	EF-hand_7	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EF-hand_8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Mito_carr	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Slc25a25	PhenoGen
PRINTS	GRAVESDC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MITOCARRIER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	EF_HAND_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SOLCAR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	EFh	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF103506	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF47473	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I6AEC3_RAT	UniProtKB/TrEMBL
	A0A8I6AFK8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AHU5_RAT	UniProtKB/TrEMBL
	A0A8I6ALC5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GFE3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QB89	ENTREZGENE, UniProtKB/TrEMBL
	Q8K3P6	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-09	Slc25a25	solute carrier family 25 member 25	Slc25a25	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	Slc25a25	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	Pcscl	peroxisomal Ca-dependent solute carrier-like protein	Symbol and Name updated	1299863	APPROVED
2003-02-27	Pcscl	peroxisomal Ca-dependent solute carrier-like protein			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in liver and skeletal muscle	633593
gene_expression	displays increased expression during hepatocyte differentiation	633593

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar