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Gene: Slco1c1 (solute carrier organic anion transporter family, member 1c1) Rattus norvegicus
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Symbol: Slco1c1
Name: solute carrier organic anion transporter family, member 1c1
RGD ID: 628660
Description: Exhibits bile acid transmembrane transporter activity. Involved in bile acid and bile salt transport. Localizes to basolateral plasma membrane. Biomarker of primary biliary cholangitis. Orthologous to human SLCO1C1 (solute carrier organic anion transporter family member 1C1); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: BBB-specific anion transporter type 1; blood-brain barrier specific anion transporter; blood-brain barrier-specific anion transporter 1; Bsat1; Oatp14; Oatp2; Slc21a14; solute carrier family 21 (organic anion transporter), member 14; solute carrier family 21 member 14; solute carrier organic anion transporter family member 1C1; thyroxine transporter
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04175,729,709 - 175,776,749 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4175,729,726 - 175,776,808 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04239,951,715 - 239,997,944 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44178,959,893 - 179,006,727 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14179,205,016 - 179,251,850 (+)NCBI
Celera4163,007,118 - 163,053,764 (+)NCBICelera
Cytogenetic Map4q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Slco1c1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628660
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.