Slco1c1 (solute carrier organic anion transporter family, member 1c1) - Rat Genome Database

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Gene: Slco1c1 (solute carrier organic anion transporter family, member 1c1) Rattus norvegicus
Analyze
Symbol: Slco1c1
Name: solute carrier organic anion transporter family, member 1c1
RGD ID: 628660
Description: Enables bile acid transmembrane transporter activity. Involved in bile acid and bile salt transport. Located in basolateral plasma membrane. Biomarker of primary biliary cholangitis. Orthologous to human SLCO1C1 (solute carrier organic anion transporter family member 1C1); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: BAST1; BBB-specific anion transporter type 1; blood-brain barrier specific anion transporter; blood-brain barrier-specific anion transporter 1; Bsat1; OATP-14; Oatp14; OATP1C1; Oatp2; organic anion transporter 1C1; organic anion-transporting polypeptide 14; Slc21a14; solute carrier family 21 (organic anion transporter), member 14; solute carrier family 21 member 14; solute carrier organic anion transporter family member 1C1; thyroxine transporter
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84176,197,736 - 176,244,401 (+)NCBIGRCr8
mRatBN7.24174,466,621 - 174,513,290 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4174,466,631 - 174,513,289 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4180,761,522 - 180,808,184 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04176,545,790 - 176,592,460 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04175,166,330 - 175,212,987 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04175,729,709 - 175,776,749 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4175,729,726 - 175,776,808 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04239,951,715 - 239,997,944 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44178,959,893 - 179,006,727 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14179,205,016 - 179,251,850 (+)NCBI
Celera4163,007,118 - 163,053,764 (+)NCBICelera
Cytogenetic Map4q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
basolateral plasma membrane  (IBA,IDA,IEA,ISO)
plasma membrane  (IDA,IEA,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Distribution of organic anion-transporting polypeptide 2 (oatp2) and oatp3 in the rat retina. Ito A, etal., Invest Ophthalmol Vis Sci 2002 Mar;43(3):858-63.
3. Blood-brain barrier genomics. Li JY, etal., J Cereb Blood Flow Metab. 2001 Jan;21(1):61-8.
4. Transport of the sulfated, amidated bile acid, sulfolithocholyltaurine, into rat hepatocytes is mediated by Oatp1 and Oatp2. Meng LJ, etal., Hepatology 2002 May;35(5):1031-40.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Magnetic resonance imaging with hepatospecific contrast agents in cirrhotic rat livers. Planchamp C, etal., Invest Radiol. 2005 Apr;40(4):187-94.
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Expression of the thyroid hormone transporters monocarboxylate transporter-8 (SLC16A2) and organic ion transporter-14 (SLCO1C1) at the blood-brain barrier. Roberts LM, etal., Endocrinology. 2008 Dec;149(12):6251-61. doi: 10.1210/en.2008-0378. Epub 2008 Aug 7.
11. Messenger RNA profiles in liver injury and stress: a comparison of lethal and nonlethal rat models. Tygstrup N, etal., Biochem Biophys Res Commun 2002 Jan 11;290(1):518-25.
Additional References at PubMed
PMID:12130705   PMID:12351693   PMID:12702494   PMID:12830001   PMID:12883478   PMID:12923172   PMID:17667996   PMID:18566113   PMID:18845642   PMID:19819953   PMID:22871113   PMID:24143363  
PMID:24143376   PMID:24763672   PMID:25594699   PMID:26861177   PMID:28688524   PMID:31561916   PMID:32636400  


Genomics

Comparative Map Data
Slco1c1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84176,197,736 - 176,244,401 (+)NCBIGRCr8
mRatBN7.24174,466,621 - 174,513,290 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4174,466,631 - 174,513,289 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4180,761,522 - 180,808,184 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04176,545,790 - 176,592,460 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04175,166,330 - 175,212,987 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04175,729,709 - 175,776,749 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4175,729,726 - 175,776,808 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04239,951,715 - 239,997,944 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44178,959,893 - 179,006,727 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14179,205,016 - 179,251,850 (+)NCBI
Celera4163,007,118 - 163,053,764 (+)NCBICelera
Cytogenetic Map4q44NCBI
SLCO1C1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381220,695,332 - 20,753,386 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1220,695,332 - 20,753,386 (+)EnsemblGRCh38hg38GRCh38
GRCh371220,848,266 - 20,906,320 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361220,739,666 - 20,797,587 (+)NCBINCBI36Build 36hg18NCBI36
Build 341220,739,665 - 20,797,585NCBI
Celera1226,003,971 - 26,061,652 (+)NCBICelera
Cytogenetic Map12p12.2NCBI
HuRef1220,620,269 - 20,677,924 (+)NCBIHuRef
CHM1_11220,814,189 - 20,871,884 (+)NCBICHM1_1
T2T-CHM13v2.01220,573,918 - 20,631,651 (+)NCBIT2T-CHM13v2.0
Slco1c1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396141,470,080 - 141,515,903 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6141,470,094 - 141,515,903 (+)EnsemblGRCm39 Ensembl
GRCm386141,524,354 - 141,570,177 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6141,524,368 - 141,570,177 (+)EnsemblGRCm38mm10GRCm38
MGSCv376141,472,907 - 141,518,698 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366141,486,956 - 141,532,122 (+)NCBIMGSCv36mm8
Celera6144,586,311 - 144,632,101 (+)NCBICelera
Cytogenetic Map6G2NCBI
cM Map672.38NCBI
Slco1c1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541316,654,618 - 16,705,720 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541316,654,655 - 16,705,638 (+)NCBIChiLan1.0ChiLan1.0
SLCO1C1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21026,142,465 - 26,199,535 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11226,139,229 - 26,196,299 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01220,698,207 - 20,755,434 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11221,079,431 - 21,136,631 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1221,079,437 - 21,136,631 (+)Ensemblpanpan1.1panPan2
SLCO1C1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12726,497,639 - 26,553,790 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2726,498,292 - 26,553,314 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2719,902,986 - 19,958,946 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02726,823,633 - 26,879,842 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2726,823,643 - 26,879,686 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12726,686,400 - 26,742,130 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02726,671,581 - 26,727,757 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02719,607,438 - 19,663,420 (+)NCBIUU_Cfam_GSD_1.0
Slco1c1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494587,775,315 - 87,823,044 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365485,698,199 - 5,745,876 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365485,698,218 - 5,745,870 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLCO1C1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl552,234,398 - 52,315,026 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1552,234,396 - 52,315,311 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2555,511,431 - 55,592,551 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLCO1C1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11120,555,953 - 20,612,455 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1120,555,846 - 20,612,761 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606914,539,339 - 14,596,159 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slco1c1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475217,720,716 - 17,765,561 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475217,718,696 - 17,765,705 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slco1c1
204 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:150
Count of miRNA genes:113
Interacting mature miRNAs:127
Transcripts:ENSRNOT00000013230
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
2303623Vencon2Ventilatory control QTL 23.8respiration trait (VT:0001943)minute ventilation (CMO:0000132)4135204660180204660Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4135699135180699135Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4146565735175236377Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4155561574182687754Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4137755016181392681Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4145568712182687754Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1300109Rf13Renal function QTL 133.91renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)4157710145182687754Rat

Markers in Region
D4Got111  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24174,506,997 - 174,507,207 (+)MAPPERmRatBN7.2
Rnor_6.04175,770,067 - 175,770,276NCBIRnor6.0
Rnor_5.04239,991,877 - 239,992,086UniSTSRnor5.0
RGSC_v3.44179,000,664 - 179,000,874RGDRGSC3.4
RGSC_v3.44179,000,665 - 179,000,874UniSTSRGSC3.4
RGSC_v3.14179,245,788 - 179,245,998RGD
Celera4163,047,472 - 163,047,681UniSTS
RH 3.4 Map41031.32UniSTS
RH 3.4 Map41031.32RGD
RH 2.0 Map4892.4RGD
Cytogenetic Map4q44UniSTS
AU046632  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24174,467,690 - 174,467,855 (+)MAPPERmRatBN7.2
Rnor_6.04175,730,769 - 175,730,933NCBIRnor6.0
Rnor_5.04239,952,786 - 239,952,950UniSTSRnor5.0
RGSC_v3.44178,960,953 - 178,961,117UniSTSRGSC3.4
Celera4163,008,178 - 163,008,342UniSTS
Cytogenetic Map4q44UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 68
Low 6 8 23
Below cutoff 2 35 36 35 2 35 5 5 13 15 6 5

Sequence


RefSeq Acc Id: ENSRNOT00000013230   ⟹   ENSRNOP00000013230
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4174,466,631 - 174,513,289 (+)Ensembl
Rnor_6.0 Ensembl4175,729,726 - 175,776,808 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000116390   ⟹   ENSRNOP00000091816
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4174,466,631 - 174,513,289 (+)Ensembl
RefSeq Acc Id: NM_053441   ⟹   NP_445893
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84176,197,741 - 176,244,396 (+)NCBI
mRatBN7.24174,466,631 - 174,513,290 (+)NCBI
Rnor_6.04175,729,709 - 175,776,749 (+)NCBI
Rnor_5.04239,951,715 - 239,997,944 (+)NCBI
RGSC_v3.44178,959,893 - 179,006,727 (+)RGD
Celera4163,007,118 - 163,053,764 (+)RGD
Sequence:
RefSeq Acc Id: XM_039108471   ⟹   XP_038964399
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84176,197,736 - 176,244,401 (+)NCBI
mRatBN7.24174,466,621 - 174,513,290 (+)NCBI
Protein Sequences
Protein RefSeqs NP_445893 (Get FASTA)   NCBI Sequence Viewer  
  XP_038964399 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG37066 (Get FASTA)   NCBI Sequence Viewer  
  EDM01549 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000013230
  ENSRNOP00000013230.3
  ENSRNOP00000091816.1
GenBank Protein Q9EPZ7 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_445893   ⟸   NM_053441
- UniProtKB: Q9EPZ7 (UniProtKB/Swiss-Prot),   A0A8I6GJ93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000013230   ⟸   ENSRNOT00000013230
RefSeq Acc Id: XP_038964399   ⟸   XM_039108471
- Peptide Label: isoform X1
- UniProtKB: G3V795 (UniProtKB/TrEMBL),   A6IMP0 (UniProtKB/TrEMBL),   A0A8I6GJ93 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000091816   ⟸   ENSRNOT00000116390
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EPZ7-F1-model_v2 AlphaFold Q9EPZ7 1-716 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:628660 AgrOrtholog
BioCyc Gene G2FUF-42514 BioCyc
Ensembl Genes ENSRNOG00000009740 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013230 ENTREZGENE
  ENSRNOT00000013230.6 UniProtKB/TrEMBL
  ENSRNOT00000116390.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.60.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Kazal_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kazal_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:84511 UniProtKB/Swiss-Prot
NCBI Gene 84511 ENTREZGENE
PANTHER PTHR11388 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11388:SF99 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Kazal_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slco1c1 PhenoGen
PROSITE KAZAL_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000009740 RatGTEx
Superfamily-SCOP SSF100895 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF103473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I6GJ93 ENTREZGENE, UniProtKB/TrEMBL
  A6IMP0 ENTREZGENE, UniProtKB/TrEMBL
  G3V795 ENTREZGENE, UniProtKB/TrEMBL
  Q9EPZ7 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Slco1c1  solute carrier organic anion transporter family, member 1c1  Slc21a14  solute carrier family 21 (organic anion transporter), member 14  Symbol and Name updated 1299863 APPROVED
2003-02-27 Slc21a14  solute carrier family 21 (organic anion transporter), member 14      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression mRNA signals seen in the retinal pigment epithelium and the inner nuclear layer 70527
gene_expression expressed in apical membrane of the choroid plexus 70527
gene_process transports organic anions in ocular tissue 70527
gene_regulation bile acid transporter activity does not require sodium ions 634158