Gene: Rpl29 (ribosomal protein L29) Mus musculus
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Symbol:
Rpl29
Name:
ribosomal protein L29
Description:
ENCODES a protein that exhibits heparin binding; INVOLVED IN cell population proliferation; cell-substrate adhesion; multicellular organism growth; PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH abnormal cell cycle; decreased body weight; decreased fibroblast proliferation; FOUND IN cytosolic ribosome; extrinsic component of membrane; polysomal ribosome; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; benzo[a]pyrene
Type:
protein-coding
RefSeq Status:
VALIDATED
Also known as:
60S ribosomal protein L29; MGC107574; MGC107575; MGC107576; Rpl43
Orthologs:
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
RPL29 (ribosomal protein L29) HGNC
Ensembl, HGNC, NCBI, OMA, OrthoDB, Treefam
Rattus norvegicus (Norway rat):
Rpl29 (ribosomal protein L29) HGNC
Treefam, NCBI, OMA, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):
Rpl29 (ribosomal protein L29) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
RPL29 (ribosomal protein L29) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Rpl29 (ribosomal protein L29) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
RPL29 (ribosomal protein L29) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Rattus norvegicus (Norway rat):
Rpl29 (ribosomal protein L29)
Alliance
DIOPT (Ensembl Compara, OMA, OrthoFinder, PANTHER, TreeFam)
Homo sapiens (human):
RPL29 (ribosomal protein L29)
Alliance
DIOPT (Ensembl Compara, HGNC, OMA, OrthoFinder, PANTHER, TreeFam)
Danio rerio (zebrafish):
rpl29 (ribosomal protein L29)
Alliance
DIOPT (Ensembl Compara, OrthoFinder, PANTHER, ZFIN)
Caenorhabditis elegans (roundworm):
rpl-29
Alliance
DIOPT (Ensembl Compara, OrthoFinder, PANTHER)
Saccharomyces cerevisiae (baker's yeast):
RPL29
Alliance
DIOPT (Ensembl Compara, OrthoFinder, PANTHER)
Drosophila melanogaster (fruit fly):
RpL29
Alliance
DIOPT (Ensembl Compara, OrthoFinder, PANTHER)
Related Pseudogenes:
Gm10548
Gm10709
Gm11270
Gm13841
Gm15454
Gm3550
Gm4945
Gm5561
Gm6344
Gm8210
Gm8580
Rpl29-ps1
Rpl29-ps2
Rpl29-ps4
Rpl29-ps5
Rpl29-ps6
Latest Assembly:
GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm38 9 106,428,889 - 106,431,568 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 MGSCv37 9 106,331,870 - 106,333,898 (+) NCBI GRCm37 mm9 NCBIm37 MGSCv36 9 106,287,640 - 106,289,668 (+) NCBI mm8 Celera 9 106,056,937 - 106,058,955 (+) NCBI Celera Cytogenetic Map 9 F1 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Gene-Chemical Interaction Annotations
2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of RPL29 mRNA CTD PMID:20702594 more ... 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of RPL29 mRNA CTD PMID:17949056 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO RGD:62069 6480464 Tetrachlorodibenzodioxin results in increased expression of RPL29 mRNA CTD PMID:15358164 2,3,7,8-Tetrachlorodibenzofuran affects expression EXP 6480464 2 more ... CTD PMID:20702594 2,4,6-trinitrotoluene affects expression ISO RGD:62069 6480464 Trinitrotoluene affects the expression of RPL29 mRNA CTD PMID:21346803 4,4'-sulfonyldiphenol increases expression ISO RGD:737093 6480464 bis(4-hydroxyphenyl)sulfone results in increased expression of RPL29 mRNA CTD PMID:25912373 ammonium chloride affects expression ISO RGD:62069 6480464 Ammonium Chloride affects the expression of RPL29 mRNA CTD PMID:16483693 antirheumatic drug increases expression ISO RGD:737093 6480464 Antirheumatic Agents results in increased expression of RPL29 mRNA CTD PMID:24449571 atrazine decreases expression ISO RGD:737093 6480464 Atrazine results in decreased expression of RPL29 mRNA CTD PMID:22378314 benzo[a]pyrene multiple interactions EXP 6480464 AHR protein affects the reaction [Benzo(a)pyrene affects the expression of RPL29 mRNA] CTD PMID:22228805 benzo[a]pyrene increases expression EXP 6480464 Benzo(a)pyrene results in increased expression of RPL29 mRNA CTD PMID:22228805 benzo[a]pyrene diol epoxide I increases expression ISO RGD:737093 6480464 7 more ... CTD PMID:19150397 bis(2-ethylhexyl) phthalate decreases expression ISO RGD:737093 6480464 Diethylhexyl Phthalate results in decreased expression of RPL29 mRNA CTD PMID:28412506 bisphenol A increases expression ISO RGD:62069 6480464 bisphenol A results in increased expression of RPL29 mRNA CTD PMID:25181051 bisphenol A decreases expression ISO RGD:737093 6480464 bisphenol A results in decreased expression of RPL29 mRNA CTD PMID:29275510 chloropicrin affects expression ISO RGD:737093 6480464 chloropicrin affects the expression of RPL29 mRNA CTD PMID:26352163 chloropicrin decreases expression ISO RGD:737093 6480464 chloropicrin results in decreased expression of RPL29 mRNA CTD PMID:28476498 chromium(6+) affects expression EXP 6480464 chromium hexavalent ion affects the expression of RPL29 mRNA CTD PMID:28472532 cisplatin affects expression ISO RGD:737093 6480464 Cisplatin affects the expression of RPL29 mRNA CTD PMID:23300844 copper atom multiple interactions ISO RGD:737093 6480464 [Disulfiram binds to Copper] which results in decreased expression of RPL29 mRNA CTD PMID:24690739 copper(0) multiple interactions ISO RGD:737093 6480464 [Disulfiram binds to Copper] which results in decreased expression of RPL29 mRNA CTD PMID:24690739 copper(2+) multiple interactions ISO RGD:737093 6480464 [Disulfiram binds to Copper] which results in decreased expression of RPL29 mRNA CTD PMID:24690739 cypermethrin decreases expression EXP 6480464 cypermethrin results in decreased expression of RPL29 mRNA CTD PMID:29020013 disodium selenite increases expression ISO RGD:737093 6480464 Sodium Selenite results in increased expression of RPL29 mRNA CTD PMID:18175754 disulfiram multiple interactions ISO RGD:737093 6480464 [Disulfiram binds to Copper] which results in decreased expression of RPL29 mRNA CTD PMID:24690739 endosulfan increases expression ISO RGD:62069 6480464 Endosulfan results in increased expression of RPL29 mRNA CTD PMID:29391264 enzyme inhibitor multiple interactions ISO RGD:737093 6480464 [Enzyme Inhibitors results in decreased activity of OGA protein] which results in increased O-linked glycosylation of RPL29 protein CTD PMID:23301498 glafenine increases expression ISO RGD:62069 6480464 Glafenine results in increased expression of RPL29 mRNA CTD PMID:24136188 lead(0) affects expression ISO RGD:737093 6480464 Lead affects the expression of RPL29 mRNA CTD PMID:28903495 lead(2+) affects expression ISO RGD:737093 6480464 Lead affects the expression of RPL29 mRNA CTD PMID:28903495 methoxychlor increases methylation ISO RGD:62069 6480464 Methoxychlor results in increased methylation of RPL29 gene CTD PMID:19589859 nickel atom multiple interactions EXP 6480464 MT1 affects the reaction [Nickel affects the expression of RPL29 mRNA], MT2 affects the reaction [Nickel affects the expression of RPL29 mRNA] CTD PMID:16166738 perfluorooctanoic acid increases expression ISO RGD:737093 6480464 perfluorooctanoic acid results in increased expression of RPL29 protein CTD PMID:26879310 pirinixic acid increases expression EXP 6480464 pirinixic acid results in increased expression of RPL29 mRNA CTD PMID:23811191 progesterone affects expression EXP 6480464 Progesterone affects the expression of RPL29 mRNA CTD PMID:17251523 tetrachloromethane affects expression ISO RGD:62069 6480464 Carbon Tetrachloride affects the expression of RPL29 mRNA CTD PMID:15963342 titanium dioxide increases expression ISO RGD:737093 6480464 titanium dioxide results in increased expression of RPL29 protein CTD PMID:30910687 tunicamycin decreases expression ISO RGD:737093 6480464 Tunicamycin results in decreased expression of RPL29 mRNA CTD PMID:22378314 , PMID:29453283 valproic acid affects expression EXP 6480464 Valproic Acid affects the expression of RPL29 mRNA CTD PMID:17963808
Gene Ontology Annotations
Biological Process cell population proliferation IMP MGI:MGI:3696667 2290270 (MGI:MGI:3695840, PMID:17195189) MGI MGI:MGI:3695840 , PMID:17195189 cell-substrate adhesion IDA 2290270 (MGI:MGI:1932245, PMID:11259264) MGI MGI:MGI:1932245 , PMID:11259264 cytoplasmic translation IBA PANTHER:PTN000306390 , SGD:S000006437 2290270 (PMID:21873635) GO_Central PMID:21873635 multicellular organism growth IMP MGI:MGI:3696667 , MGI:MGI:3696668 2290270 (MGI:MGI:3695840, PMID:17195189) MGI MGI:MGI:3695840 , PMID:17195189 translation IMP MGI:MGI:3696667 2290270 (MGI:MGI:3695840, PMID:17195189) MGI MGI:MGI:3695840 , PMID:17195189
Cellular Component cytosolic large ribosomal subunit ISO RGD:62069 2290270 RGD GO_REF:0000096, MGI:MGI:4417868 cytosolic large ribosomal subunit IBA PANTHER:PTN000306390 more ... 2290270 (PMID:21873635) GO_Central PMID:21873635 cytosolic ribosome IDA 2290270 (MGI:MGI:3695840, PMID:17195189) MGI MGI:MGI:3695840 , PMID:17195189 extrinsic component of membrane IDA 2290270 (MGI:MGI:1289857, PMID:9737974) MGI MGI:MGI:1289857 , PMID:9737974 polysomal ribosome IDA 2290270 (MGI:MGI:3695840, PMID:17195189) MGI MGI:MGI:3695840 , PMID:17195189 ribosome ISO RGD:62069 2290270 RGD GO_REF:0000096, MGI:MGI:4417868 synapse IDA 2290270 (MGI:MGI:6189245, PMID:16452087) MGI MGI:MGI:6189245 , PMID:16452087 synapse EXP 2290270 (MGI:MGI:6189245, PMID:16452087) MGI MGI:MGI:6189245 , PMID:16452087 Molecular Function heparin binding IDA 2290270 (MGI:MGI:1289857, PMID:9737974) MGI MGI:MGI:1289857 , PMID:9737974 structural constituent of ribosome IBA PANTHER:PTN000306390 , SGD:S000006437 2290270 (PMID:21873635) GO_Central PMID:21873635
Molecular Pathway Annotations
Phenotype Annotations
13207569 Tcq13_m total cholesterol QTL 13 (mouse) 9 59990000 109260000 Mouse 4141833 W10q13_m weight 10 weeks QTL 13 (mouse) Not determined 63332429 120362868 Mouse 4141545 Tailaq2_m tail length adjusted QTL 2 (mouse) Not determined 63332429 120362868 Mouse 1357635 Splq4_m spleen weight QTL 4 (mouse) Not determined 9 63332429 120362868 Mouse 1301573 Etohcta8_m ethanol conditioned taste aversion 8 (mouse) Not determined 9 72977005 106977152 Mouse 10054068 El8_m epilepsy 8 (mouse) Not determined 9 72977005 106977152 Mouse 1301725 Lifespan1_m life span 1 (mouse) Not determined 9 74368177 108368325 Mouse 1302065 El1_m epilepsy 1 (mouse) Not determined 9 75775364 114474379 Mouse 10054492 El7_m epilepsy 7 (mouse) Not determined 9 75775364 114474379 Mouse 1301407 Rapop2_m radiation-induced apoptosis 2 (mouse) Not determined 9 76535936 110536130 Mouse 1301192 Skts6_m skin tumor susceptibility 6 (mouse) Not determined 9 78640645 112640755 Mouse 10401247 Bglu14_m blood glucose level 14 (mouse) Not determined 9 79397810 113397888 Mouse 1301732 Char1_m P. chabaudi malaria resistance QTL 1 (mouse) Not determined 9 81798268 115798392 Mouse 1300884 Sluc11_m susceptibility to lung cancer 11 (mouse) Not determined 9 82910333 116910428 Mouse 1357461 Idd2_m insulin dependent diabetes susceptibility 2 (mouse) Not determined 9 82910333 116910428 Mouse 10766454 Char10_m P. chabaudi malaria resistance QTL 10 (mouse) 9 82910333 116910428 Mouse 1301487 Nociq1_m nociceptive sensitivity inflammatory QTL 1 (mouse) Not determined 9 84528818 118528921 Mouse 10412180 Msam3_m muscle, skeletal, activity measure 3 (mouse) Not determined 9 85897510 108641186 Mouse 1300549 Bbaa17_m B. burgdorferi-associated arthritis 17 (mouse) Not determined 9 86230401 120230530 Mouse 1302103 Dob2_m dietary obesity 2 (mouse) Not determined 9 86239845 120289624 Mouse 11251716 Siim2_m stress induced immobility 2 (mouse) 9 86748483 120748483 Mouse 12880422 V25Dq6_m vitamin D inactive form serum level QTL 6 (mouse) 9 87800000 121800000 Mouse 10412242 Alpq8_m alcohol preference QTL 8 (mouse) Not determined 9 89284925 123284925 Mouse 1301649 Psl1_m promotion susceptibility QTL 1 (mouse) Not determined 9 89412277 123412396 Mouse 1357657 Pymr_m Plasmodium yoelli malaria resistance (mouse) Not determined 9 89977005 118938021 Mouse 12910770 Splic1_m spleen iron content 1 (mouse) 9 91413879 124595110 Mouse 12910772 Lvic6_m liver iron content 6 (mouse) 9 91413879 124595110 Mouse 12910773 Splic3_m spleen iron content 3 (mouse) 9 91413879 124595110 Mouse 1558767 Skmw11_m skeletal muscle weight 11 (mouse) Not determined 9 91641084 124595110 Mouse 13463474 Hbbcq5_m hemoglobin concentration QTL 5 (mouse) 9 91641084 124595110 Mouse 13463475 Hctq7_m hematocrit QTL 7 (mouse) 9 91641084 124595110 Mouse 13463477 Rbc9_m red blood cell count 9 (mouse) 9 91641084 124595110 Mouse 13463478 Mchq18_m mean corpuscular hemoglobin QTL 18 (mouse) 9 91641084 124595110 Mouse 13463480 Mchcq2_m mean corpuscular hemoglobin concentration QTL 2 (mouse) 9 91641084 124595110 Mouse 12904937 Edlmmq9_m extensor digitorum longus muscle mass QTL 9 (mouse) 9 91683173 124595110 Mouse 12904947 Tammq7_m tibialis anterior muscle mass QTL 7 (mouse) 9 91683173 124595110 Mouse 12904961 Gmmq7_m gastrocnemius muscle mass QTL 7 (mouse) 9 91683173 124595110 Mouse 1302001 Bdln5_m body length 5 (mouse) Not determined 9 93762590 124595110 Mouse 1301484 Bwq6_m body weight (mouse) Not determined 9 93762590 124595110 Mouse 14746992 Manh67_m mandible shape 67 (mouse) 9 94036768 124595110 Mouse 11081166 Psl5_m promotion susceptibility QTL 5 (mouse) 9 94981301 112872929 Mouse 11537364 Cnes5_m C. neoformans susceptibility locus 5 (mouse) 9 96917590 124595110 Mouse 1301297 Lcho1_m liver cholesterol 1 (mouse) Not determined 9 101060861 124595110 Mouse 1357627 Tgq2_m triglyceride QTL 2 (mouse) Not determined 9 102000187 124595110 Mouse 1357648 Obq18_m obesity QTL 18 (mouse) Not determined 9 102000187 124595110 Mouse 1301789 Pbwg4_m postnatal body weight growth 4 (mouse) Not determined 9 103289445 124595110 Mouse 10412290 Pvacm1l_m plasma vascular cell adhesion molecule 1 levels (mouse) Not determined 9 103289445 124595110 Mouse 12879896 Berr3_m berghei resistance locus 3 (mouse) 9 103289445 124595110 Mouse
Predicted Target Of
Count of predictions: 283 Count of miRNA genes: 129 Interacting mature miRNAs: 139 Transcripts: ENSMUST00000059802, ENSMUST00000150576 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
Gene Ontology Annotations
