Extl3 (exostosin-like glycosyltransferase 3) - Rat Genome Database

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Gene: Extl3 (exostosin-like glycosyltransferase 3) Mus musculus
Analyze
Symbol: Extl3
Name: exostosin-like glycosyltransferase 3
RGD ID: 62357
MGI Page MGI
Description: Enables protein-hormone receptor activity. Involved in several processes, including negative regulation of cytokine production involved in inflammatory response; negative regulation of inflammatory response to wounding; and negative regulation of keratinocyte differentiation. Is active in plasma membrane. Is expressed in several structures, including alimentary system; central nervous system; heart; metanephros; and sensory organ. Orthologous to human EXTL3 (exostosin like glycosyltransferase 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2900009G18Rik; AU040105; exostoses (multiple)-like 3; exostoses-like 3; exostosin; exostosin-like 3; Ext1l; glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase; KIAA0519; mKIAA0519; multiple exostosis-like protein 3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391465,289,508 - 65,387,322 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1465,289,509 - 65,387,304 (-)EnsemblGRCm39 Ensembl
GRCm381465,052,059 - 65,149,899 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1465,052,060 - 65,149,855 (-)EnsemblGRCm38mm10GRCm38
MGSCv371465,670,896 - 65,716,943 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361464,006,173 - 64,034,585 (-)NCBIMGSCv36mm8
Celera1462,814,500 - 62,860,622 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1433.86NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
endoplasmic reticulum  (ISO)
Golgi apparatus  (IBA,ISO)
membrane  (IEA)
nucleus  (IEA)
plasma membrane  (IDA,ISO,ISS)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:14618397   PMID:14681479   PMID:15246697   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:18799693   PMID:19158046   PMID:19336225   PMID:21267068   PMID:21873635   PMID:22158612   PMID:22727489   PMID:24803591   PMID:27830702   PMID:28378742  
PMID:28811323   PMID:32201365   PMID:34099862   PMID:35263589   PMID:35676258   PMID:36240758   PMID:38355793  


Genomics

Comparative Map Data
Extl3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391465,289,508 - 65,387,322 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1465,289,509 - 65,387,304 (-)EnsemblGRCm39 Ensembl
GRCm381465,052,059 - 65,149,899 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1465,052,060 - 65,149,855 (-)EnsemblGRCm38mm10GRCm38
MGSCv371465,670,896 - 65,716,943 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361464,006,173 - 64,034,585 (-)NCBIMGSCv36mm8
Celera1462,814,500 - 62,860,622 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1433.86NCBI
EXTL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38828,607,736 - 28,755,599 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl828,600,469 - 28,756,561 (+)EnsemblGRCh38hg38GRCh38
GRCh37828,559,018 - 28,613,116 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36828,615,072 - 28,667,121 (+)NCBINCBI36Build 36hg18NCBI36
Build 34828,615,071 - 28,667,121NCBI
Celera827,519,006 - 27,571,052 (+)NCBICelera
Cytogenetic Map8p21.1NCBI
HuRef827,104,516 - 27,156,747 (+)NCBIHuRef
CHM1_1828,761,018 - 28,813,245 (+)NCBICHM1_1
T2T-CHM13v2.0828,885,904 - 29,033,822 (+)NCBIT2T-CHM13v2.0
Extl3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81543,469,293 - 43,559,760 (-)NCBIGRCr8
mRatBN7.21539,294,033 - 39,384,086 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1539,293,605 - 39,338,898 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1541,159,992 - 41,183,433 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01542,310,683 - 42,334,125 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01540,756,090 - 40,779,885 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01548,420,419 - 48,465,171 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1548,422,492 - 48,445,592 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01552,167,241 - 52,307,996 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41544,400,139 - 44,424,584 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11544,415,838 - 44,440,284 (-)NCBI
Celera1538,971,658 - 38,994,995 (-)NCBICelera
Cytogenetic Map15p12NCBI
Extl3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540351,076,319 - 51,102,435 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540351,076,323 - 51,102,435 (+)NCBIChiLan1.0ChiLan1.0
EXTL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2747,141,178 - 47,300,524 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1822,877,190 - 23,013,515 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0827,983,700 - 28,035,879 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1825,079,531 - 25,233,599 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl825,174,414 - 25,233,599 (+)Ensemblpanpan1.1panPan2
EXTL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12528,788,803 - 28,833,964 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2528,790,506 - 28,937,647 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2529,437,368 - 29,587,684 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02528,944,632 - 29,095,861 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2528,944,637 - 29,029,690 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12528,905,043 - 29,055,721 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02528,790,655 - 28,940,548 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02528,953,232 - 29,105,065 (-)NCBIUU_Cfam_GSD_1.0
Extl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049437,108,930 - 7,137,757 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366751,448,366 - 1,477,216 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366751,448,381 - 1,479,735 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EXTL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1412,437,515 - 12,563,544 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11412,437,551 - 12,563,548 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21413,660,607 - 13,712,760 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EXTL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1826,729,772 - 26,861,953 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl826,821,141 - 26,864,926 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605215,268,419 - 15,404,953 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Extl3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475823,324,512 - 23,368,584 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475823,257,623 - 23,370,782 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Extl3
3256 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:989
Count of miRNA genes:569
Interacting mature miRNAs:674
Transcripts:ENSMUST00000022550
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1301489Lbm10_mlean body mass 10 (mouse)Not determined145376129687761529Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
4142364Pbwg18_mpostnatal body weight growth 18 (mouse)Not determined145228198486282125Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
10043889Cia52_mcollagen induced arthritis QTL 52 (mouse)Not determined145608238190082509Mouse
1301562Hwq1_mheart weight quantitative locus 1 (mouse)Not determined145654674590546941Mouse
1300666Fembm2_mfemoral bone morphometry 2 (mouse)Not determined146239746096397680Mouse
1357565wrmod1_mwobbler modifier 1 (mouse)Not determined1458179640101859473Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse
11039527Ccc2_mcolitis susceptibility in the Collaborative Cross 2 (mouse)145991861294138217Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
12880432Fgf23lq3_mFGF23 serum level QTL 3 (mouse)145393744087937440Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse

Markers in Region
AU040105  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381465,052,316 - 65,052,410UniSTSGRCm38
MGSCv371465,671,153 - 65,671,247UniSTSGRCm37
Celera1462,814,757 - 62,814,851UniSTS
Cytogenetic Map14D1UniSTS
Extl3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381465,076,673 - 65,076,981UniSTSGRCm38
MGSCv371465,695,510 - 65,695,818UniSTSGRCm37
Celera1462,839,158 - 62,839,466UniSTS
Cytogenetic Map14D1UniSTS
cM Map14 UniSTS
Extl3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map14D1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001360385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC155172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF083550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF539474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ129577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO044892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000022550   ⟹   ENSMUSP00000022550
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1465,289,509 - 65,335,555 (-)Ensembl
GRCm38.p6 Ensembl1465,052,060 - 65,098,106 (-)Ensembl
Ensembl Acc Id: ENSMUST00000223989
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1465,315,199 - 65,387,304 (-)Ensembl
GRCm38.p6 Ensembl1465,077,750 - 65,149,855 (-)Ensembl
Ensembl Acc Id: ENSMUST00000225633   ⟹   ENSMUSP00000153547
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1465,289,512 - 65,335,554 (-)Ensembl
GRCm38.p6 Ensembl1465,052,063 - 65,098,105 (-)Ensembl
RefSeq Acc Id: NM_001360385   ⟹   NP_001347314
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,335,525 (-)NCBI
GRCm381465,052,059 - 65,098,106 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001404938   ⟹   NP_001391867
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,387,322 (-)NCBI
RefSeq Acc Id: NM_001404939   ⟹   NP_001391868
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,387,322 (-)NCBI
RefSeq Acc Id: NM_001404940   ⟹   NP_001391869
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,387,322 (-)NCBI
RefSeq Acc Id: NM_001404941   ⟹   NP_001391870
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,335,525 (-)NCBI
RefSeq Acc Id: NM_001404942   ⟹   NP_001391871
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,335,525 (-)NCBI
RefSeq Acc Id: NM_001404943   ⟹   NP_001391872
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,335,525 (-)NCBI
RefSeq Acc Id: NM_001404944   ⟹   NP_001391873
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,387,322 (-)NCBI
RefSeq Acc Id: NM_001404945   ⟹   NP_001391874
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,335,525 (-)NCBI
RefSeq Acc Id: NM_001404946   ⟹   NP_001391875
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,335,525 (-)NCBI
RefSeq Acc Id: NM_018788   ⟹   NP_061258
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391465,289,508 - 65,335,525 (-)NCBI
GRCm381465,052,059 - 65,098,106 (-)NCBI
MGSCv371465,670,896 - 65,716,943 (-)RGD
Celera1462,814,500 - 62,860,622 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_061258   ⟸   NM_018788
- Peptide Label: isoform 1
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot),   Q6P1H4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001347314   ⟸   NM_001360385
- Peptide Label: isoform 1
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot),   Q6P1H4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000153547   ⟸   ENSMUST00000225633
Ensembl Acc Id: ENSMUSP00000022550   ⟸   ENSMUST00000022550
RefSeq Acc Id: NP_001391868   ⟸   NM_001404939
- Peptide Label: isoform 1
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot),   Q6P1H4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391873   ⟸   NM_001404944
- Peptide Label: isoform 3
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391867   ⟸   NM_001404938
- Peptide Label: isoform 1
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot),   Q6P1H4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391869   ⟸   NM_001404940
- Peptide Label: isoform 1
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot),   Q6P1H4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001391874   ⟸   NM_001404945
- Peptide Label: isoform 3
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391871   ⟸   NM_001404942
- Peptide Label: isoform 2
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391875   ⟸   NM_001404946
- Peptide Label: isoform 3
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391872   ⟸   NM_001404943
- Peptide Label: isoform 2
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391870   ⟸   NM_001404941
- Peptide Label: isoform 1
- UniProtKB: Q9WVL6 (UniProtKB/Swiss-Prot),   E9QKN8 (UniProtKB/Swiss-Prot),   Q6P1H4 (UniProtKB/TrEMBL)
Protein Domains
Exostosin GT47   Glycosyl transferase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WVL6-F1-model_v2 AlphaFold Q9WVL6 1-918 view protein structure

Promoters
RGD ID:8682754
Promoter ID:EPDNEW_M19408
Type:initiation region
Name:Extl3_1
Description:Mus musculus exostoses -like 3 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381465,098,053 - 65,098,113EPDNEW
RGD ID:6824909
Promoter ID:MM_KWN:17233
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   Brain,   Kidney,   Liver,   Lung,   Spleen
Transcripts:ENSMUST00000111165
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361465,694,801 - 65,696,637 (-)MPROMDB
RGD ID:6824908
Promoter ID:MM_KWN:17234
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000022550,   NM_018788_EXTL3,   UC007UIX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361465,699,351 - 65,699,851 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1860765 AgrOrtholog
Ensembl Genes ENSMUSG00000021978 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000022550 ENTREZGENE
  ENSMUST00000022550.8 UniProtKB/TrEMBL
  ENSMUST00000225633.2 UniProtKB/TrEMBL
InterPro Exostosin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Exostosin_GT47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GT64 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1860765 ENTREZGENE
NCBI Gene 54616 ENTREZGENE
PANTHER ACETYLGLUCOSAMINYLTRANSFERASE UniProtKB/Swiss-Prot
  ACETYLGLUCOSAMINYLTRANSFERASE UniProtKB/Swiss-Prot
  ACETYLGLUCOSAMINYLTRANSFERASE UniProtKB/TrEMBL
  ACETYLGLUCOSAMINYLTRANSFERASE UniProtKB/TrEMBL
Pfam Exostosin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_transf_64 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Extl3 PhenoGen
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E9QKN8 ENTREZGENE
  EXTL3_MOUSE UniProtKB/Swiss-Prot
  Q3UUW7_MOUSE UniProtKB/TrEMBL
  Q5DU26_MOUSE UniProtKB/TrEMBL
  Q6P1H4 ENTREZGENE, UniProtKB/TrEMBL
  Q9WVL6 ENTREZGENE
UniProt Secondary E9QKN8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-09-10 Extl3  exostosin-like glycosyltransferase 3  Extl3  exostoses (multiple)-like 3  Symbol and/or name change 5135510 APPROVED